RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 NISCHQ9Y2I1 1504 aa25.42■■□□□ 1.66
C9orf139-202ENST00000623196 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
C9orf139-202ENST00000623196 SUPT5HO00267 1087 aaKnown RBP24.49■■□□□ 1.51
C9orf139-202ENST00000623196 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
C9orf139-202ENST00000623196 PELP1Q8IZL8 1130 aaKnown RBP23.89■■□□□ 1.41
C9orf139-202ENST00000623196 EHMT2Q96KQ7 1210 aa23.49■■□□□ 1.35
C9orf139-202ENST00000623196 PCGF6Q9BYE7 350 aa23.27■■□□□ 1.32
C9orf139-202ENST00000623196 APLP2Q06481 763 aa23.22■■□□□ 1.31
C9orf139-202ENST00000623196 FAM9AQ8IZU1 332 aaPredicted RBP23■■□□□ 1.27
C9orf139-202ENST00000623196 CENPBP07199 599 aaPredicted RBP22.96■■□□□ 1.27
C9orf139-202ENST00000623196 ERICH6Q7L0X2 663 aa22.85■■□□□ 1.25
C9orf139-202ENST00000623196 CCER1Q8TC90 406 aaPredicted RBP22.8■■□□□ 1.24
C9orf139-202ENST00000623196 ZEB1P37275 1124 aaPredicted RBP22.79■■□□□ 1.24
C9orf139-202ENST00000623196 TTBK1Q5TCY1 1321 aaPredicted RBP22.74■■□□□ 1.23
C9orf139-202ENST00000623196 MYT1Q01538 1121 aa22.59■■□□□ 1.21
C9orf139-202ENST00000623196 TRIM41Q8WV44 630 aa22.54■■□□□ 1.2
C9orf139-202ENST00000623196 HRCP23327 699 aa22.47■■□□□ 1.19
C9orf139-202ENST00000623196 NEFLP07196 543 aa22.41■■□□□ 1.18
C9orf139-202ENST00000623196 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
C9orf139-202ENST00000623196 LOC105371045A0A1W2PR82 267 aa22.37■■□□□ 1.17
C9orf139-202ENST00000623196 RANGAP1P46060 587 aaPredicted RBP22.33■■□□□ 1.17
C9orf139-202ENST00000623196 PPARGC1BQ86YN6 1023 aaKnown RBP22.32■■□□□ 1.16
C9orf139-202ENST00000623196 YTHDC1Q96MU7 727 aaKnown RBP22.26■■□□□ 1.15
C9orf139-202ENST00000623196 TRIM26Q12899 539 aaPredicted RBP22.21■■□□□ 1.15
C9orf139-202ENST00000623196 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
C9orf139-202ENST00000623196 UBTFP17480 764 aaKnown RBP22.16■■□□□ 1.14
C9orf139-202ENST00000623196 DAXXQ9UER7 740 aaPredicted RBP21.8■■□□□ 1.08
C9orf139-202ENST00000623196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.66■■□□□ 1.06
C9orf139-202ENST00000623196 ITGAEP38570 1179 aa21.53■■□□□ 1.04
C9orf139-202ENST00000623196 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
C9orf139-202ENST00000623196 POLR3GLQ9BT43 218 aa21.52■■□□□ 1.04
C9orf139-202ENST00000623196 RTL5Q5HYW3 569 aaPredicted RBP21.41■■□□□ 1.02
C9orf139-202ENST00000623196 DIEXFQ68CQ4 756 aaKnown RBP21.41■■□□□ 1.02
C9orf139-202ENST00000623196 CNGB1Q14028 1251 aaPredicted RBP21.32■■□□□ 1
C9orf139-202ENST00000623196 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
C9orf139-202ENST00000623196 MYT1LQ9UL68 1186 aa21.25■□□□□ 0.99
C9orf139-202ENST00000623196 MYO15BQ96JP2 1530 aa21.22■□□□□ 0.99
C9orf139-202ENST00000623196 CLSPNQ9HAW4 1339 aa21.22■□□□□ 0.99
C9orf139-202ENST00000623196 ZCCHC6Q5VYS8 1495 aaKnown RBP21.21■□□□□ 0.99
C9orf139-202ENST00000623196 GTF3C3Q9Y5Q9 886 aa21.18■□□□□ 0.98
C9orf139-202ENST00000623196 ABCC9O60706 1549 aa21.15■□□□□ 0.98
C9orf139-202ENST00000623196 DCAF1Q9Y4B6 1507 aa21.07■□□□□ 0.96
C9orf139-202ENST00000623196 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
C9orf139-202ENST00000623196 SLC4A1APQ9BWU0 796 aaKnown RBP21.02■□□□□ 0.96
C9orf139-202ENST00000623196 BCANQ96GW7 911 aa20.98■□□□□ 0.95
C9orf139-202ENST00000623196 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
C9orf139-202ENST00000623196 CDK11AQ9UQ88 783 aaPredicted RBP20.93■□□□□ 0.94
C9orf139-202ENST00000623196 FAM50AQ14320 339 aaKnown RBP20.9■□□□□ 0.94
C9orf139-202ENST00000623196 ANP32CO43423 234 aa20.87■□□□□ 0.93
C9orf139-202ENST00000623196 SCRIBQ14160 1630 aa20.85■□□□□ 0.93
C9orf139-202ENST00000623196 NEUROD1Q13562 356 aa20.85■□□□□ 0.93
C9orf139-202ENST00000623196 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
C9orf139-202ENST00000623196 CSRNP3Q8WYN3 585 aa20.8■□□□□ 0.92
C9orf139-202ENST00000623196 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
C9orf139-202ENST00000623196 ZBTB47Q9UFB7 747 aaPredicted RBP20.72■□□□□ 0.91
C9orf139-202ENST00000623196 CCDC180Q9P1Z9 1646 aa20.65■□□□□ 0.9
C9orf139-202ENST00000623196 ZNF326Q5BKZ1 582 aaKnown RBP20.65■□□□□ 0.9
C9orf139-202ENST00000623196 ANP32AP39687 249 aaKnown RBP20.62■□□□□ 0.89
C9orf139-202ENST00000623196 CANXP27824 592 aaKnown RBP20.55■□□□□ 0.88
C9orf139-202ENST00000623196 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
C9orf139-202ENST00000623196 P3H3Q8IVL6 736 aa20.49■□□□□ 0.87
C9orf139-202ENST00000623196 MIER1Q8N108 512 aa20.43■□□□□ 0.86
C9orf139-202ENST00000623196 BCL11AQ9H165 835 aa20.43■□□□□ 0.86
C9orf139-202ENST00000623196 EIF5BO60841 1220 aaKnown RBP20.43■□□□□ 0.86
C9orf139-202ENST00000623196 NPM2Q86SE8 214 aaKnown RBP20.42■□□□□ 0.86
C9orf139-202ENST00000623196 NEFMP07197 916 aa20.42■□□□□ 0.86
C9orf139-202ENST00000623196 FKBP8Q14318 412 aa20.37■□□□□ 0.85
C9orf139-202ENST00000623196 ANP32BQ92688 251 aaKnown RBP20.34■□□□□ 0.85
C9orf139-202ENST00000623196 SLC24A1O60721 1099 aa20.31■□□□□ 0.84
C9orf139-202ENST00000623196 DDX10Q13206 875 aaKnown RBP20.27■□□□□ 0.84
C9orf139-202ENST00000623196 CEP162Q5TB80 1403 aa20.27■□□□□ 0.84
C9orf139-202ENST00000623196 ARID3CA6NKF2 412 aa20.27■□□□□ 0.84
C9orf139-202ENST00000623196 HNRNPUQ00839 825 aaKnown RBP eCLIP20.24■□□□□ 0.83
C9orf139-202ENST00000623196 HSP90AA1P07900 732 aaKnown RBP20.24■□□□□ 0.83
C9orf139-202ENST00000623196 UPF2Q9HAU5 1272 aaKnown RBP20.22■□□□□ 0.83
C9orf139-202ENST00000623196 GLIPR1L2Q4G1C9 344 aa20.21■□□□□ 0.83
C9orf139-202ENST00000623196 CLIP1P30622 1438 aa20.19■□□□□ 0.82
C9orf139-202ENST00000623196 TONSLQ96HA7 1378 aa20.15■□□□□ 0.82
C9orf139-202ENST00000623196 HIRIP3Q9BW71 556 aaPredicted RBP20.15■□□□□ 0.82
C9orf139-202ENST00000623196 FBLN2P98095 1184 aa20.14■□□□□ 0.81
C9orf139-202ENST00000623196 FAM9BQ8IZU0 186 aa20.13■□□□□ 0.81
C9orf139-202ENST00000623196 CCDC136Q96JN2 1154 aa20.12■□□□□ 0.81
C9orf139-202ENST00000623196 CECR2Q9BXF3 1484 aa20.12■□□□□ 0.81
C9orf139-202ENST00000623196 RB1CC1Q8TDY2 1594 aa20.09■□□□□ 0.81
C9orf139-202ENST00000623196 ZNF777Q9ULD5 760 aaPredicted RBP20.07■□□□□ 0.8
C9orf139-202ENST00000623196 NBR1Q14596 966 aa20.07■□□□□ 0.8
C9orf139-202ENST00000623196 GOLGA3Q08378 1498 aa20.06■□□□□ 0.8
C9orf139-202ENST00000623196 TNIKQ9UKE5 1360 aa20.04■□□□□ 0.8
C9orf139-202ENST00000623196 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.03■□□□□ 0.8
C9orf139-202ENST00000623196 TMC1Q8TDI8 760 aa20.01■□□□□ 0.79
C9orf139-202ENST00000623196 SALL2Q9Y467 1007 aaPredicted RBP20.01■□□□□ 0.79
C9orf139-202ENST00000623196 SOGA1O94964 1423 aa19.97■□□□□ 0.79
C9orf139-202ENST00000623196 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
C9orf139-202ENST00000623196 CHIC2Q9UKJ5 165 aa19.97■□□□□ 0.79
C9orf139-202ENST00000623196 EEA1Q15075 1411 aa19.97■□□□□ 0.79
C9orf139-202ENST00000623196 IRX6P78412 446 aaPredicted RBP19.96■□□□□ 0.79
C9orf139-202ENST00000623196 MRS2Q9HD23 443 aa19.93■□□□□ 0.78
C9orf139-202ENST00000623196 ARXQ96QS3 562 aa19.91■□□□□ 0.78
C9orf139-202ENST00000623196 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
C9orf139-202ENST00000623196 CHGAP10645 457 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms