RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 KMT2AQ03164 3969 aa1.05□□□□□ -2.24
RNU6-538P-201ENST00000622329 PTPN13Q12923 2485 aa1.04□□□□□ -2.24
RNU6-538P-201ENST00000622329 H3BNG1 76 aa1.04□□□□□ -2.24
RNU6-538P-201ENST00000622329 DNAH11Q96DT5 4516 aa1.03□□□□□ -2.24
RNU6-538P-201ENST00000622329 TNP1P09430 55 aa1.03□□□□□ -2.24
RNU6-538P-201ENST00000622329 ZFYVE26Q68DK2 2539 aa1.03□□□□□ -2.25
RNU6-538P-201ENST00000622329 NBASA2RRP1 2371 aa1.01□□□□□ -2.25
RNU6-538P-201ENST00000622329 MAP1BP46821 2468 aaKnown RBP1□□□□□ -2.25
RNU6-538P-201ENST00000622329 HIVEP3Q5T1R4 2406 aa1□□□□□ -2.25
RNU6-538P-201ENST00000622329 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
RNU6-538P-201ENST00000622329 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
RNU6-538P-201ENST00000622329 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
RNU6-538P-201ENST00000622329 MYCBP2O75592 4640 aa0.98□□□□□ -2.25
RNU6-538P-201ENST00000622329 LINC01590Q5TEZ4 76 aa0.98□□□□□ -2.25
RNU6-538P-201ENST00000622329 TTTY10Q9BZA0 68 aa0.98□□□□□ -2.25
RNU6-538P-201ENST00000622329 SETXQ7Z333 2677 aaKnown RBP0.97□□□□□ -2.25
RNU6-538P-201ENST00000622329 ACANP16112 2415 aa0.97□□□□□ -2.25
RNU6-538P-201ENST00000622329 LPAP08519 4548 aa0.97□□□□□ -2.25
RNU6-538P-201ENST00000622329 PDZD2O15018 2839 aa0.96□□□□□ -2.26
RNU6-538P-201ENST00000622329 SPRR2DP22532 72 aa0.96□□□□□ -2.26
RNU6-538P-201ENST00000622329 NAV2Q8IVL1 2488 aa0.96□□□□□ -2.26
RNU6-538P-201ENST00000622329 NF1P21359 2839 aa0.96□□□□□ -2.26
RNU6-538P-201ENST00000622329 WNK1Q9H4A3 2382 aa0.96□□□□□ -2.26
RNU6-538P-201ENST00000622329 PRCDQ00LT1 54 aa0.95□□□□□ -2.26
RNU6-538P-201ENST00000622329 LRP1Q07954 4544 aaKnown RBP0.95□□□□□ -2.26
RNU6-538P-201ENST00000622329 DNAH3Q8TD57 4116 aa0.95□□□□□ -2.26
RNU6-538P-201ENST00000622329 COL6A5A8TX70 2615 aa0.95□□□□□ -2.26
RNU6-538P-201ENST00000622329 VPS13DQ5THJ4 4388 aa0.94□□□□□ -2.26
RNU6-538P-201ENST00000622329 DEFB110Q30KQ9 67 aa0.92□□□□□ -2.26
RNU6-538P-201ENST00000622329 PKD1P98161 4303 aa0.92□□□□□ -2.26
RNU6-538P-201ENST00000622329 SPENQ96T58 3664 aaKnown RBP0.92□□□□□ -2.26
RNU6-538P-201ENST00000622329 DMBT1Q9UGM3 2413 aaPredicted RBP0.91□□□□□ -2.26
RNU6-538P-201ENST00000622329 FLNCQ14315 2725 aa0.91□□□□□ -2.26
RNU6-538P-201ENST00000622329 APC2O95996 2303 aa0.9□□□□□ -2.26
RNU6-538P-201ENST00000622329 SETD2Q9BYW2 2564 aaPredicted RBP0.9□□□□□ -2.27
RNU6-538P-201ENST00000622329 CUBNO60494 3623 aa0.9□□□□□ -2.27
RNU6-538P-201ENST00000622329 CHD7Q9P2D1 2997 aa0.9□□□□□ -2.27
RNU6-538P-201ENST00000622329 ANK3Q12955 4377 aaKnown RBP0.89□□□□□ -2.27
RNU6-538P-201ENST00000622329 GCN1Q92616 2671 aaKnown RBP0.89□□□□□ -2.27
RNU6-538P-201ENST00000622329 SPRR2BP35325 72 aa0.89□□□□□ -2.27
RNU6-538P-201ENST00000622329 HECTD4Q9Y4D8 3996 aa0.89□□□□□ -2.27
RNU6-538P-201ENST00000622329 SPART-AS1P0CW21 52 aa0.88□□□□□ -2.27
RNU6-538P-201ENST00000622329 PKHD1L1Q86WI1 4243 aa0.88□□□□□ -2.27
RNU6-538P-201ENST00000622329 DYNC2H1Q8NCM8 4307 aaKnown RBP0.87□□□□□ -2.27
RNU6-538P-201ENST00000622329 ACACAQ13085 2346 aa0.87□□□□□ -2.27
RNU6-538P-201ENST00000622329 ZZEF1O43149 2961 aa0.87□□□□□ -2.27
RNU6-538P-201ENST00000622329 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
RNU6-538P-201ENST00000622329 HSPG2P98160 4391 aa0.86□□□□□ -2.27
RNU6-538P-201ENST00000622329 H3BSH0 61 aa0.86□□□□□ -2.27
RNU6-538P-201ENST00000622329 DEFB104AQ8WTQ1 72 aa0.86□□□□□ -2.27
RNU6-538P-201ENST00000622329 STAB1Q9NY15 2570 aa0.86□□□□□ -2.27
RNU6-538P-201ENST00000622329 DNAH2Q9P225 4427 aa0.86□□□□□ -2.27
RNU6-538P-201ENST00000622329 MTORP42345 2549 aa0.85□□□□□ -2.27
RNU6-538P-201ENST00000622329 NSD1Q96L73 2696 aaPredicted RBP0.85□□□□□ -2.27
RNU6-538P-201ENST00000622329 FLNBO75369 2602 aaKnown RBP0.85□□□□□ -2.27
RNU6-538P-201ENST00000622329 DNAH9Q9NYC9 4486 aa0.84□□□□□ -2.27
RNU6-538P-201ENST00000622329 K7EIM0 57 aa0.84□□□□□ -2.27
RNU6-538P-201ENST00000622329 DMXL1Q9Y485 3027 aa0.83□□□□□ -2.28
RNU6-538P-201ENST00000622329 SPTBN4Q9H254 2564 aa0.83□□□□□ -2.28
RNU6-538P-201ENST00000622329 TACC2O95359 2948 aa0.83□□□□□ -2.28
RNU6-538P-201ENST00000622329 FLGP20930 4061 aaPredicted RBP0.82□□□□□ -2.28
RNU6-538P-201ENST00000622329 USP24Q9UPU5 2620 aa0.82□□□□□ -2.28
RNU6-538P-201ENST00000622329 NCOR2Q9Y618 2525 aa0.82□□□□□ -2.28
RNU6-538P-201ENST00000622329 HRNRQ86YZ3 2850 aaPredicted RBP0.82□□□□□ -2.28
RNU6-538P-201ENST00000622329 COL7A1Q02388 2944 aa0.81□□□□□ -2.28
RNU6-538P-201ENST00000622329 CACNA1AO00555 2505 aa0.81□□□□□ -2.28
RNU6-538P-201ENST00000622329 RIF1Q5UIP0 2472 aaKnown RBP0.8□□□□□ -2.28
RNU6-538P-201ENST00000622329 NBPF19A0A087WUL8 3843 aa0.8□□□□□ -2.28
RNU6-538P-201ENST00000622329 APOBP04114 4563 aaKnown RBP0.79□□□□□ -2.28
RNU6-538P-201ENST00000622329 SONP18583 2426 aaKnown RBP0.79□□□□□ -2.28
RNU6-538P-201ENST00000622329 EPG5Q9HCE0 2579 aa0.78□□□□□ -2.28
RNU6-538P-201ENST00000622329 TENM2Q9NT68 2774 aa0.78□□□□□ -2.28
RNU6-538P-201ENST00000622329 DNAH8Q96JB1 4490 aa0.78□□□□□ -2.28
RNU6-538P-201ENST00000622329 KRTAP8-1Q8IUC2 63 aa0.78□□□□□ -2.28
RNU6-538P-201ENST00000622329 DNAH6Q9C0G6 4158 aa0.78□□□□□ -2.28
RNU6-538P-201ENST00000622329 LRRK2Q5S007 2527 aa0.78□□□□□ -2.28
RNU6-538P-201ENST00000622329 DNAH7Q8WXX0 4024 aa0.78□□□□□ -2.29
RNU6-538P-201ENST00000622329 CCDC168Q8NDH2 2452 aa0.77□□□□□ -2.29
RNU6-538P-201ENST00000622329 ANKRD11Q6UB99 2663 aaPredicted RBP0.77□□□□□ -2.29
RNU6-538P-201ENST00000622329 MT1AP04731 61 aa0.77□□□□□ -2.29
RNU6-538P-201ENST00000622329 SPRR2AP35326 72 aa0.77□□□□□ -2.29
RNU6-538P-201ENST00000622329 DCHS2Q6V1P9 2916 aa0.77□□□□□ -2.29
RNU6-538P-201ENST00000622329 KRTAP6-2Q3LI66 62 aa0.76□□□□□ -2.29
RNU6-538P-201ENST00000622329 ZFHX4Q86UP3 3567 aa0.76□□□□□ -2.29
RNU6-538P-201ENST00000622329 COL12A1Q99715 3063 aa0.75□□□□□ -2.29
RNU6-538P-201ENST00000622329 FRYQ5TBA9 3013 aa0.75□□□□□ -2.29
RNU6-538P-201ENST00000622329 UTP20O75691 2785 aaKnown RBP0.75□□□□□ -2.29
RNU6-538P-201ENST00000622329 FAM186AA6NE01 2351 aa0.75□□□□□ -2.29
RNU6-538P-201ENST00000622329 TENM3Q9P273 2699 aa0.75□□□□□ -2.29
RNU6-538P-201ENST00000622329 AKAP9Q99996 3911 aa0.75□□□□□ -2.29
RNU6-538P-201ENST00000622329 SPTBN5Q9NRC6 3674 aaKnown RBP0.74□□□□□ -2.29
RNU6-538P-201ENST00000622329 ANKHD1Q8IWZ3 2542 aaKnown RBP0.74□□□□□ -2.29
RNU6-538P-201ENST00000622329 LRP1BQ9NZR2 4599 aa0.74□□□□□ -2.29
RNU6-538P-201ENST00000622329 FAT3Q8TDW7 4589 aa0.74□□□□□ -2.29
RNU6-538P-201ENST00000622329 RANBP2P49792 3224 aaKnown RBP0.74□□□□□ -2.29
RNU6-538P-201ENST00000622329 TMEM167AQ8TBQ9 72 aa0.73□□□□□ -2.29
RNU6-538P-201ENST00000622329 IGSF10Q6WRI0 2623 aa0.73□□□□□ -2.29
RNU6-538P-201ENST00000622329 PKHD1P08F94 4074 aa0.73□□□□□ -2.29
RNU6-538P-201ENST00000622329 CRYBG3Q68DQ2 2970 aa0.72□□□□□ -2.29
RNU6-538P-201ENST00000622329 NBEAL2Q6ZNJ1 2754 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms