RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 H1FX-AS1Q4G0G2 97 aa7.81□□□□□ -1.16
COL1A2-213ENST00000620463 A0A087X002 238 aa7.81□□□□□ -1.16
COL1A2-213ENST00000620463 NOTCH2NLQ7Z3S9 236 aa7.81□□□□□ -1.16
COL1A2-213ENST00000620463 RELNP78509 3460 aa7.81□□□□□ -1.16
COL1A2-213ENST00000620463 TENM4Q6N022 2769 aa7.79□□□□□ -1.16
COL1A2-213ENST00000620463 APCP25054 2843 aa7.77□□□□□ -1.17
COL1A2-213ENST00000620463 KMT2BQ9UMN6 2715 aaPredicted RBP7.75□□□□□ -1.17
COL1A2-213ENST00000620463 HRNRQ86YZ3 2850 aaPredicted RBP7.74□□□□□ -1.17
COL1A2-213ENST00000620463 NF1P21359 2839 aa7.73□□□□□ -1.17
COL1A2-213ENST00000620463 CELSR2Q9HCU4 2923 aa7.73□□□□□ -1.17
COL1A2-213ENST00000620463 DCHS2Q6V1P9 2916 aa7.71□□□□□ -1.18
COL1A2-213ENST00000620463 SMR3BP02814 79 aaPredicted RBP7.71□□□□□ -1.18
COL1A2-213ENST00000620463 KRTAP1-5Q9BYS1 174 aa7.68□□□□□ -1.18
COL1A2-213ENST00000620463 PANO1I0J062 215 aa7.67□□□□□ -1.18
COL1A2-213ENST00000620463 NIPBLQ6KC79 2804 aaeCLIP7.67□□□□□ -1.18
COL1A2-213ENST00000620463 FBN2P35556 2912 aa7.67□□□□□ -1.18
COL1A2-213ENST00000620463 A8MUU9 505 aa7.67□□□□□ -1.18
COL1A2-213ENST00000620463 LINC00483Q53H64 154 aa7.66□□□□□ -1.18
COL1A2-213ENST00000620463 KRTAP7-1Q8IUC3 87 aa7.65□□□□□ -1.18
COL1A2-213ENST00000620463 PLAC8Q9NZF1 115 aa7.65□□□□□ -1.18
COL1A2-213ENST00000620463 ZFHX4Q86UP3 3567 aa7.64□□□□□ -1.19
COL1A2-213ENST00000620463 CAMK2N1Q7Z7J9 78 aa7.61□□□□□ -1.19
COL1A2-213ENST00000620463 J3QL48 77 aa7.61□□□□□ -1.19
COL1A2-213ENST00000620463 KRTAP11-1Q8IUC1 163 aa7.6□□□□□ -1.19
COL1A2-213ENST00000620463 S4R3F8 94 aa7.58□□□□□ -1.2
COL1A2-213ENST00000620463 C20orf166-AS1Q96NR2 134 aa7.53□□□□□ -1.2
COL1A2-213ENST00000620463 MXRA5Q9NR99 2828 aa7.52□□□□□ -1.21
COL1A2-213ENST00000620463 COX6B2Q6YFQ2 88 aa7.49□□□□□ -1.21
COL1A2-213ENST00000620463 R4GN34 69 aa7.48□□□□□ -1.21
COL1A2-213ENST00000620463 Q6ZSA8 131 aa7.44□□□□□ -1.22
COL1A2-213ENST00000620463 SMG1Q96Q15 3661 aaKnown RBP7.4□□□□□ -1.22
COL1A2-213ENST00000620463 KRTAP13-1Q8IUC0 172 aa7.4□□□□□ -1.23
COL1A2-213ENST00000620463 M0QZ58 72 aa7.38□□□□□ -1.23
COL1A2-213ENST00000620463 CELSR1Q9NYQ6 3014 aa7.37□□□□□ -1.23
COL1A2-213ENST00000620463 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
COL1A2-213ENST00000620463 H0YAA0 97 aa7.36□□□□□ -1.23
COL1A2-213ENST00000620463 TENM3Q9P273 2699 aa7.32□□□□□ -1.24
COL1A2-213ENST00000620463 CSMD1Q96PZ7 3565 aa7.32□□□□□ -1.24
COL1A2-213ENST00000620463 KRTAP10-1P60331 282 aa7.29□□□□□ -1.24
COL1A2-213ENST00000620463 KRTAP10-2P60368 255 aa7.28□□□□□ -1.24
COL1A2-213ENST00000620463 SVEP1Q4LDE5 3571 aa7.27□□□□□ -1.25
COL1A2-213ENST00000620463 PLAC4Q8WY50 150 aa7.26□□□□□ -1.25
COL1A2-213ENST00000620463 PKD1L1Q8TDX9 2849 aa7.25□□□□□ -1.25
COL1A2-213ENST00000620463 KRTAP13-2Q52LG2 175 aa7.24□□□□□ -1.25
COL1A2-213ENST00000620463 TENM1Q9UKZ4 2725 aa7.23□□□□□ -1.25
COL1A2-213ENST00000620463 Q6ZRN7 208 aaPredicted RBP7.23□□□□□ -1.25
COL1A2-213ENST00000620463 TGP01266 2768 aa7.21□□□□□ -1.25
COL1A2-213ENST00000620463 CUBNO60494 3623 aa7.19□□□□□ -1.26
COL1A2-213ENST00000620463 OTOGQ6ZRI0 2925 aa7.19□□□□□ -1.26
COL1A2-213ENST00000620463 P0C880 135 aa7.17□□□□□ -1.26
COL1A2-213ENST00000620463 FBN1P35555 2871 aaKnown RBP7.16□□□□□ -1.26
COL1A2-213ENST00000620463 SPENQ96T58 3664 aaKnown RBP7.16□□□□□ -1.26
COL1A2-213ENST00000620463 PDZD2O15018 2839 aa7.15□□□□□ -1.26
COL1A2-213ENST00000620463 NBPF19A0A087WUL8 3843 aa7.15□□□□□ -1.27
COL1A2-213ENST00000620463 Q5VSD8 79 aa7.14□□□□□ -1.27
COL1A2-213ENST00000620463 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
COL1A2-213ENST00000620463 KRTAP21-3Q3LHN1 58 aa7.13□□□□□ -1.27
COL1A2-213ENST00000620463 VWFP04275 2813 aa7.13□□□□□ -1.27
COL1A2-213ENST00000620463 CSMD2Q7Z408 3487 aa7.13□□□□□ -1.27
COL1A2-213ENST00000620463 ZFHX3Q15911 3703 aa7.12□□□□□ -1.27
COL1A2-213ENST00000620463 RPS29P62273 56 aaKnown RBP7.1□□□□□ -1.27
COL1A2-213ENST00000620463 TENM2Q9NT68 2774 aa7.09□□□□□ -1.27
COL1A2-213ENST00000620463 KRTAP13-3Q3SY46 172 aa7.06□□□□□ -1.28
COL1A2-213ENST00000620463 BSNQ9UPA5 3926 aa6.99□□□□□ -1.29
COL1A2-213ENST00000620463 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
COL1A2-213ENST00000620463 M0R2T5 61 aa6.93□□□□□ -1.3
COL1A2-213ENST00000620463 TPRXLQ17RH7 258 aa6.92□□□□□ -1.3
COL1A2-213ENST00000620463 SRRM2Q9UQ35 2752 aaKnown RBP6.91□□□□□ -1.3
COL1A2-213ENST00000620463 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
COL1A2-213ENST00000620463 TNP1P09430 55 aa6.87□□□□□ -1.31
COL1A2-213ENST00000620463 KRTAP1-4P0C5Y4 121 aa6.84□□□□□ -1.31
COL1A2-213ENST00000620463 TRRAPQ9Y4A5 3859 aa6.76□□□□□ -1.33
COL1A2-213ENST00000620463 KRTAP12-2P59991 146 aa6.74□□□□□ -1.33
COL1A2-213ENST00000620463 VPS13CQ709C8 3753 aa6.69□□□□□ -1.34
COL1A2-213ENST00000620463 ANK3Q12955 4377 aaKnown RBP6.67□□□□□ -1.34
COL1A2-213ENST00000620463 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
COL1A2-213ENST00000620463 KRTAP12-1P59990 96 aa6.63□□□□□ -1.35
COL1A2-213ENST00000620463 XP32Q5T750 250 aa6.62□□□□□ -1.35
COL1A2-213ENST00000620463 KRTAP3-1Q9BYR8 98 aa6.62□□□□□ -1.35
COL1A2-213ENST00000620463 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
COL1A2-213ENST00000620463 FBN3Q75N90 2809 aa6.57□□□□□ -1.36
COL1A2-213ENST00000620463 ZNF469Q96JG9 3925 aaPredicted RBP6.55□□□□□ -1.36
COL1A2-213ENST00000620463 KRTAP10-6P60371 365 aaPredicted RBP6.51□□□□□ -1.37
COL1A2-213ENST00000620463 COL7A1Q02388 2944 aa6.51□□□□□ -1.37
COL1A2-213ENST00000620463 MEGF8Q7Z7M0 2845 aa6.5□□□□□ -1.37
COL1A2-213ENST00000620463 A0A1B0GVY2 172 aa6.35□□□□□ -1.39
COL1A2-213ENST00000620463 KRTAP3-2Q9BYR7 98 aa6.27□□□□□ -1.41
COL1A2-213ENST00000620463 AKAP9Q99996 3911 aa6.26□□□□□ -1.41
COL1A2-213ENST00000620463 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.41
COL1A2-213ENST00000620463 INE1O15225 51 aa6.18□□□□□ -1.42
COL1A2-213ENST00000620463 KRTAP3-3Q9BYR6 98 aa6.18□□□□□ -1.42
COL1A2-213ENST00000620463 CSMD3Q7Z407 3707 aa6.18□□□□□ -1.42
COL1A2-213ENST00000620463 HUWE1Q7Z6Z7 4374 aaKnown RBP6.12□□□□□ -1.43
COL1A2-213ENST00000620463 KRTAP10-10P60014 251 aa6.05□□□□□ -1.44
COL1A2-213ENST00000620463 DNHD1Q96M86 4753 aa5.98□□□□□ -1.45
COL1A2-213ENST00000620463 DNAH9Q9NYC9 4486 aa5.94□□□□□ -1.46
COL1A2-213ENST00000620463 PLECQ15149 4684 aaKnown RBP5.86□□□□□ -1.47
COL1A2-213ENST00000620463 MT1HL1P0DM35 61 aa5.84□□□□□ -1.47
COL1A2-213ENST00000620463 KRTAP4-5Q9BYR2 181 aa5.84□□□□□ -1.47
COL1A2-213ENST00000620463 KRTAP10-4P60372 401 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms