RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 KRTAP16-1A8MUX0 517 aa6.69□□□□□ -1.34
HNF4A-209ENST00000619550 COX6B2Q6YFQ2 88 aa6.69□□□□□ -1.34
HNF4A-209ENST00000619550 Q8N1X5 172 aa6.67□□□□□ -1.34
HNF4A-209ENST00000619550 LUZP6Q538Z0 58 aa6.66□□□□□ -1.34
HNF4A-209ENST00000619550 APCP25054 2843 aa6.66□□□□□ -1.34
HNF4A-209ENST00000619550 VPS13CQ709C8 3753 aa6.65□□□□□ -1.34
HNF4A-209ENST00000619550 A8MU10 97 aa6.65□□□□□ -1.35
HNF4A-209ENST00000619550 FBN2P35556 2912 aa6.64□□□□□ -1.35
HNF4A-209ENST00000619550 C9orf92A6NGG3 77 aa6.64□□□□□ -1.35
HNF4A-209ENST00000619550 DMBT1Q9UGM3 2413 aaPredicted RBP6.64□□□□□ -1.35
HNF4A-209ENST00000619550 KMT2BQ9UMN6 2715 aaPredicted RBP6.64□□□□□ -1.35
HNF4A-209ENST00000619550 Q5W150 140 aa6.63□□□□□ -1.35
HNF4A-209ENST00000619550 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
HNF4A-209ENST00000619550 TENM4Q6N022 2769 aa6.61□□□□□ -1.35
HNF4A-209ENST00000619550 KRTAP1-5Q9BYS1 174 aa6.6□□□□□ -1.35
HNF4A-209ENST00000619550 STAB2Q8WWQ8 2551 aa6.6□□□□□ -1.35
HNF4A-209ENST00000619550 HIVEP1P15822 2718 aa6.6□□□□□ -1.35
HNF4A-209ENST00000619550 NBEAL2Q6ZNJ1 2754 aa6.59□□□□□ -1.35
HNF4A-209ENST00000619550 ROMO1P60602 79 aa6.58□□□□□ -1.36
HNF4A-209ENST00000619550 NF1P21359 2839 aa6.58□□□□□ -1.36
HNF4A-209ENST00000619550 MXRA5Q9NR99 2828 aa6.57□□□□□ -1.36
HNF4A-209ENST00000619550 ADM2Q7Z4H4 148 aa6.56□□□□□ -1.36
HNF4A-209ENST00000619550 ZFHX3Q15911 3703 aa6.54□□□□□ -1.36
HNF4A-209ENST00000619550 A0A0D9SG42 100 aa6.54□□□□□ -1.36
HNF4A-209ENST00000619550 Q6ZSA8 131 aa6.53□□□□□ -1.36
HNF4A-209ENST00000619550 NBPF19A0A087WUL8 3843 aa6.53□□□□□ -1.36
HNF4A-209ENST00000619550 LINC00483Q53H64 154 aa6.52□□□□□ -1.37
HNF4A-209ENST00000619550 H1FX-AS1Q4G0G2 97 aa6.5□□□□□ -1.37
HNF4A-209ENST00000619550 RPL37P61927 97 aaKnown RBP6.5□□□□□ -1.37
HNF4A-209ENST00000619550 CUBNO60494 3623 aa6.5□□□□□ -1.37
HNF4A-209ENST00000619550 NIPBLQ6KC79 2804 aaeCLIP6.49□□□□□ -1.37
HNF4A-209ENST00000619550 KRTAP10-1P60331 282 aa6.49□□□□□ -1.37
HNF4A-209ENST00000619550 KRTAP7-1Q8IUC3 87 aa6.48□□□□□ -1.37
HNF4A-209ENST00000619550 KRTAP10-2P60368 255 aa6.46□□□□□ -1.38
HNF4A-209ENST00000619550 Q5VSD8 79 aa6.46□□□□□ -1.38
HNF4A-209ENST00000619550 FLG2Q5D862 2391 aaPredicted RBP6.45□□□□□ -1.38
HNF4A-209ENST00000619550 NOTCH2NLQ7Z3S9 236 aa6.43□□□□□ -1.38
HNF4A-209ENST00000619550 ZNF469Q96JG9 3925 aaPredicted RBP6.42□□□□□ -1.38
HNF4A-209ENST00000619550 PDZD2O15018 2839 aa6.41□□□□□ -1.38
HNF4A-209ENST00000619550 SEC61BP60468 96 aaKnown RBP6.41□□□□□ -1.38
HNF4A-209ENST00000619550 KRTAP11-1Q8IUC1 163 aa6.39□□□□□ -1.39
HNF4A-209ENST00000619550 NDUFAF8A1L188 74 aa6.39□□□□□ -1.39
HNF4A-209ENST00000619550 PANO1I0J062 215 aa6.39□□□□□ -1.39
HNF4A-209ENST00000619550 Q6ZRN7 208 aaPredicted RBP6.37□□□□□ -1.39
HNF4A-209ENST00000619550 OTOGQ6ZRI0 2925 aa6.37□□□□□ -1.39
HNF4A-209ENST00000619550 KRTAP13-1Q8IUC0 172 aa6.32□□□□□ -1.4
HNF4A-209ENST00000619550 A8MUU9 505 aa6.32□□□□□ -1.4
HNF4A-209ENST00000619550 RPS29P62273 56 aaKnown RBP6.29□□□□□ -1.4
HNF4A-209ENST00000619550 M0R2T5 61 aa6.29□□□□□ -1.4
HNF4A-209ENST00000619550 C20orf166-AS1Q96NR2 134 aa6.26□□□□□ -1.41
HNF4A-209ENST00000619550 S4R3F8 94 aa6.25□□□□□ -1.41
HNF4A-209ENST00000619550 TENM1Q9UKZ4 2725 aa6.24□□□□□ -1.41
HNF4A-209ENST00000619550 VWFP04275 2813 aa6.22□□□□□ -1.41
HNF4A-209ENST00000619550 CAMK2N1Q7Z7J9 78 aa6.18□□□□□ -1.42
HNF4A-209ENST00000619550 AKAP9Q99996 3911 aa6.17□□□□□ -1.42
HNF4A-209ENST00000619550 ANK3Q12955 4377 aaKnown RBP6.14□□□□□ -1.43
HNF4A-209ENST00000619550 R4GN34 69 aa6.11□□□□□ -1.43
HNF4A-209ENST00000619550 KRTAP13-2Q52LG2 175 aa6.11□□□□□ -1.43
HNF4A-209ENST00000619550 TRRAPQ9Y4A5 3859 aa6.1□□□□□ -1.43
HNF4A-209ENST00000619550 FBN1P35555 2871 aaKnown RBP6.08□□□□□ -1.44
HNF4A-209ENST00000619550 TENM3Q9P273 2699 aa6.08□□□□□ -1.44
HNF4A-209ENST00000619550 H0YAA0 97 aa6.06□□□□□ -1.44
HNF4A-209ENST00000619550 PKD1L1Q8TDX9 2849 aa6.05□□□□□ -1.44
HNF4A-209ENST00000619550 M0QZ58 72 aa6.04□□□□□ -1.44
HNF4A-209ENST00000619550 PLAC4Q8WY50 150 aa5.97□□□□□ -1.45
HNF4A-209ENST00000619550 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
HNF4A-209ENST00000619550 P0C880 135 aa5.95□□□□□ -1.46
HNF4A-209ENST00000619550 TENM2Q9NT68 2774 aa5.92□□□□□ -1.46
HNF4A-209ENST00000619550 PP632Q6XCG6 107 aa5.9□□□□□ -1.47
HNF4A-209ENST00000619550 KRTAP1-4P0C5Y4 121 aa5.89□□□□□ -1.47
HNF4A-209ENST00000619550 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
HNF4A-209ENST00000619550 TPRXLQ17RH7 258 aa5.79□□□□□ -1.48
HNF4A-209ENST00000619550 XP32Q5T750 250 aa5.76□□□□□ -1.49
HNF4A-209ENST00000619550 TGP01266 2768 aa5.76□□□□□ -1.49
HNF4A-209ENST00000619550 A0A1B0GVY2 172 aa5.72□□□□□ -1.49
HNF4A-209ENST00000619550 TNP1P09430 55 aa5.68□□□□□ -1.5
HNF4A-209ENST00000619550 ANK2Q01484 3957 aa5.67□□□□□ -1.5
HNF4A-209ENST00000619550 KRTAP10-8P60410 259 aa5.67□□□□□ -1.5
HNF4A-209ENST00000619550 COL7A1Q02388 2944 aa5.64□□□□□ -1.51
HNF4A-209ENST00000619550 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
HNF4A-209ENST00000619550 CMYA5Q8N3K9 4069 aa5.56□□□□□ -1.52
HNF4A-209ENST00000619550 KRTAP3-1Q9BYR8 98 aa5.54□□□□□ -1.52
HNF4A-209ENST00000619550 HUWE1Q7Z6Z7 4374 aaKnown RBP5.54□□□□□ -1.52
HNF4A-209ENST00000619550 MEGF8Q7Z7M0 2845 aa5.54□□□□□ -1.52
HNF4A-209ENST00000619550 DNHD1Q96M86 4753 aa5.52□□□□□ -1.53
HNF4A-209ENST00000619550 CSMD3Q7Z407 3707 aa5.52□□□□□ -1.53
HNF4A-209ENST00000619550 KRTAP12-2P59991 146 aa5.51□□□□□ -1.53
HNF4A-209ENST00000619550 FBN3Q75N90 2809 aa5.51□□□□□ -1.53
HNF4A-209ENST00000619550 SRRM2Q9UQ35 2752 aaKnown RBP5.49□□□□□ -1.53
HNF4A-209ENST00000619550 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
HNF4A-209ENST00000619550 DNAH9Q9NYC9 4486 aa5.45□□□□□ -1.54
HNF4A-209ENST00000619550 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
HNF4A-209ENST00000619550 PRKDCP78527 4128 aaKnown RBP5.43□□□□□ -1.54
HNF4A-209ENST00000619550 DNAH3Q8TD57 4116 aa5.43□□□□□ -1.54
HNF4A-209ENST00000619550 LYSTQ99698 3801 aa5.43□□□□□ -1.54
HNF4A-209ENST00000619550 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
HNF4A-209ENST00000619550 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.54
HNF4A-209ENST00000619550 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
HNF4A-209ENST00000619550 PLECQ15149 4684 aaKnown RBP5.36□□□□□ -1.55
HNF4A-209ENST00000619550 DNAH10Q8IVF4 4471 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms