RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 ALMS1Q8TCU4 4167 aa17.79■□□□□ 0.44
KHSRP-213ENST00000619396 CDK2AP2O75956 126 aa17.76■□□□□ 0.43
KHSRP-213ENST00000619396 A0A087X002 238 aa17.76■□□□□ 0.43
KHSRP-213ENST00000619396 NOTCH2NLQ7Z3S9 236 aa17.76■□□□□ 0.43
KHSRP-213ENST00000619396 MRPL34Q9BQ48 92 aaKnown RBP17.75■□□□□ 0.43
KHSRP-213ENST00000619396 A8MUN3 132 aa17.75■□□□□ 0.43
KHSRP-213ENST00000619396 CD164Q04900 197 aa17.75■□□□□ 0.43
KHSRP-213ENST00000619396 PCOTHQ58A44 107 aa17.74■□□□□ 0.43
KHSRP-213ENST00000619396 Q8N9P0 234 aaPredicted RBP17.74■□□□□ 0.43
KHSRP-213ENST00000619396 PKD1P98161 4303 aa17.74■□□□□ 0.43
KHSRP-213ENST00000619396 NDUFS5O43920 106 aa17.72■□□□□ 0.43
KHSRP-213ENST00000619396 CIRBP-AS1Q8TBR5 109 aa17.72■□□□□ 0.43
KHSRP-213ENST00000619396 FAT2Q9NYQ8 4349 aa17.72■□□□□ 0.43
KHSRP-213ENST00000619396 IGLV7-43P04211 117 aa17.71■□□□□ 0.43
KHSRP-213ENST00000619396 COA5Q86WW8 74 aa17.7■□□□□ 0.42
KHSRP-213ENST00000619396 C1orf195Q5TG92 126 aa17.67■□□□□ 0.42
KHSRP-213ENST00000619396 Q5VV11 94 aa17.67■□□□□ 0.42
KHSRP-213ENST00000619396 LIMD2Q9BT23 127 aa17.64■□□□□ 0.41
KHSRP-213ENST00000619396 KRTAP10-1P60331 282 aa17.61■□□□□ 0.41
KHSRP-213ENST00000619396 LRP1BQ9NZR2 4599 aa17.59■□□□□ 0.41
KHSRP-213ENST00000619396 SPINK6Q6UWN8 80 aa17.57■□□□□ 0.4
KHSRP-213ENST00000619396 KRTAP21-3Q3LHN1 58 aa17.55■□□□□ 0.4
KHSRP-213ENST00000619396 SSBP3-AS1Q7Z2R9 100 aa17.52■□□□□ 0.39
KHSRP-213ENST00000619396 PRR15LQ9BU68 103 aa17.51■□□□□ 0.39
KHSRP-213ENST00000619396 KRTAP13-3Q3SY46 172 aa17.51■□□□□ 0.39
KHSRP-213ENST00000619396 Q5W150 140 aa17.5■□□□□ 0.39
KHSRP-213ENST00000619396 Q6ZSA8 131 aa17.49■□□□□ 0.39
KHSRP-213ENST00000619396 LOC101927531A0A1B0GV80 90 aa17.46■□□□□ 0.39
KHSRP-213ENST00000619396 CHKB-CPT1BH3BT56 60 aa17.44■□□□□ 0.38
KHSRP-213ENST00000619396 HRES1P13985 223 aa17.44■□□□□ 0.38
KHSRP-213ENST00000619396 A8MU10 97 aa17.41■□□□□ 0.38
KHSRP-213ENST00000619396 Q75L30 129 aa17.4■□□□□ 0.38
KHSRP-213ENST00000619396 C8orf87E5RJ46 101 aa17.4■□□□□ 0.38
KHSRP-213ENST00000619396 SACSQ9NZJ4 4579 aa17.38■□□□□ 0.37
KHSRP-213ENST00000619396 VPS13BQ7Z7G8 4022 aa17.38■□□□□ 0.37
KHSRP-213ENST00000619396 LINC01558Q9Y6Z2 57 aa17.35■□□□□ 0.37
KHSRP-213ENST00000619396 PKHD1P08F94 4074 aa17.35■□□□□ 0.37
KHSRP-213ENST00000619396 SPAG11AQ6PDA7 123 aa17.32■□□□□ 0.36
KHSRP-213ENST00000619396 KRTAP13-2Q52LG2 175 aa17.32■□□□□ 0.36
KHSRP-213ENST00000619396 LINC00313P59037 77 aa17.26■□□□□ 0.35
KHSRP-213ENST00000619396 LCA10Q71F78 164 aa17.23■□□□□ 0.35
KHSRP-213ENST00000619396 A6NED7 52 aa17.19■□□□□ 0.34
KHSRP-213ENST00000619396 KRTAP1-4P0C5Y4 121 aa17.17■□□□□ 0.34
KHSRP-213ENST00000619396 FAM229AH3BQW9 127 aa17.15■□□□□ 0.34
KHSRP-213ENST00000619396 PMAIP1Q13794 54 aa17.15■□□□□ 0.34
KHSRP-213ENST00000619396 PRR26Q8N8Z3 221 aa17.13■□□□□ 0.33
KHSRP-213ENST00000619396 ACYP2P14621 99 aa17.11■□□□□ 0.33
KHSRP-213ENST00000619396 KRTAP16-1A8MUX0 517 aa17.11■□□□□ 0.33
KHSRP-213ENST00000619396 DMAC1Q96GE9 116 aa17.08■□□□□ 0.32
KHSRP-213ENST00000619396 CDC42SE1Q9NRR8 79 aa17.07■□□□□ 0.32
KHSRP-213ENST00000619396 DYNC1H1Q14204 4646 aaKnown RBP17.07■□□□□ 0.32
KHSRP-213ENST00000619396 RETNLBQ9BQ08 111 aa17.06■□□□□ 0.32
KHSRP-213ENST00000619396 IGKV2-30P06310 120 aa17.06■□□□□ 0.32
KHSRP-213ENST00000619396 ATP11AUNQ6ZP68 121 aa17.05■□□□□ 0.32
KHSRP-213ENST00000619396 PLA2G1BP04054 148 aaKnown RBP17.01■□□□□ 0.31
KHSRP-213ENST00000619396 SPINK7P58062 85 aa17■□□□□ 0.31
KHSRP-213ENST00000619396 SPTSSBQ8NFR3 76 aa17■□□□□ 0.31
KHSRP-213ENST00000619396 SMR3BP02814 79 aaPredicted RBP16.96■□□□□ 0.31
KHSRP-213ENST00000619396 TYMSOSQ8TAI1 123 aa16.9■□□□□ 0.3
KHSRP-213ENST00000619396 A0A1B0GVY2 172 aa16.88■□□□□ 0.29
KHSRP-213ENST00000619396 RYR2Q92736 4967 aa16.87■□□□□ 0.29
KHSRP-213ENST00000619396 FAT1Q14517 4588 aa16.86■□□□□ 0.29
KHSRP-213ENST00000619396 APOBP04114 4563 aaKnown RBP16.85■□□□□ 0.29
KHSRP-213ENST00000619396 A6NN06 94 aa16.84■□□□□ 0.29
KHSRP-213ENST00000619396 C4orf48Q5BLP8 95 aa16.83■□□□□ 0.28
KHSRP-213ENST00000619396 KMT2CQ8NEZ4 4911 aaKnown RBP16.82■□□□□ 0.28
KHSRP-213ENST00000619396 SPINK1P00995 79 aa16.8■□□□□ 0.28
KHSRP-213ENST00000619396 IGKV2D-30A0A075B6S6 120 aa16.77■□□□□ 0.27
KHSRP-213ENST00000619396 KTN1-AS1Q86SY8 53 aa16.74■□□□□ 0.27
KHSRP-213ENST00000619396 SEC61GP60059 68 aa16.69■□□□□ 0.26
KHSRP-213ENST00000619396 KRTAP10-4P60372 401 aaPredicted RBP16.66■□□□□ 0.26
KHSRP-213ENST00000619396 LINC00304Q8N9R0 145 aa16.65■□□□□ 0.26
KHSRP-213ENST00000619396 A0A1B0GU69 56 aa16.65■□□□□ 0.26
KHSRP-213ENST00000619396 RPS29P62273 56 aaKnown RBP16.6■□□□□ 0.25
KHSRP-213ENST00000619396 C7orf65Q6ZTY9 151 aa16.6■□□□□ 0.25
KHSRP-213ENST00000619396 PKHD1L1Q86WI1 4243 aa16.55■□□□□ 0.24
KHSRP-213ENST00000619396 SPATA8Q6RVD6 105 aa16.47■□□□□ 0.23
KHSRP-213ENST00000619396 Q8N1X5 172 aa16.39■□□□□ 0.21
KHSRP-213ENST00000619396 UQCR11O14957 56 aa16.37■□□□□ 0.21
KHSRP-213ENST00000619396 RYR3Q15413 4870 aa16.34■□□□□ 0.21
KHSRP-213ENST00000619396 RBM12B-AS1Q9P1G2 102 aa16.34■□□□□ 0.21
KHSRP-213ENST00000619396 MIR22HGQ0VDD5 57 aa16.33■□□□□ 0.2
KHSRP-213ENST00000619396 C9orf92A6NGG3 77 aa16.32■□□□□ 0.2
KHSRP-213ENST00000619396 A8MUU9 505 aa16.31■□□□□ 0.2
KHSRP-213ENST00000619396 C20orf166-AS1Q96NR2 134 aa16.3■□□□□ 0.2
KHSRP-213ENST00000619396 LRP1Q07954 4544 aaKnown RBP16.26■□□□□ 0.19
KHSRP-213ENST00000619396 HSPG2P98160 4391 aa16.25■□□□□ 0.19
KHSRP-213ENST00000619396 FLG2Q5D862 2391 aaPredicted RBP16.16■□□□□ 0.18
KHSRP-213ENST00000619396 TNXBP22105 4242 aa16.15■□□□□ 0.18
KHSRP-213ENST00000619396 KRTAP3-1Q9BYR8 98 aa16.13■□□□□ 0.17
KHSRP-213ENST00000619396 Q5VSD8 79 aa16.1■□□□□ 0.17
KHSRP-213ENST00000619396 KRTAP17-1Q9BYP8 105 aa16.07■□□□□ 0.16
KHSRP-213ENST00000619396 FAT3Q8TDW7 4589 aa16.05■□□□□ 0.16
KHSRP-213ENST00000619396 RYR1P21817 5038 aa16.05■□□□□ 0.16
KHSRP-213ENST00000619396 PRAC1Q96KF2 57 aa16.02■□□□□ 0.15
KHSRP-213ENST00000619396 ADM2Q7Z4H4 148 aa16■□□□□ 0.15
KHSRP-213ENST00000619396 KRTAP10-8P60410 259 aa15.96■□□□□ 0.15
KHSRP-213ENST00000619396 KIAA1109Q2LD37 5005 aa15.9■□□□□ 0.14
KHSRP-213ENST00000619396 H0YAA0 97 aa15.84■□□□□ 0.13
KHSRP-213ENST00000619396 DMBT1Q9UGM3 2413 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms