RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 SVIPQ8NHG7 77 aa13.97□□□□□ -0.17
HOXA4-204ENST00000610970 MRPL34Q9BQ48 92 aaKnown RBP13.96□□□□□ -0.17
HOXA4-204ENST00000610970 DNAH11Q96DT5 4516 aa13.96□□□□□ -0.17
HOXA4-204ENST00000610970 C4orf26Q17RF5 130 aa13.93□□□□□ -0.18
HOXA4-204ENST00000610970 FP248Q71RG6 208 aaPredicted RBP13.93□□□□□ -0.18
HOXA4-204ENST00000610970 DNAH5Q8TE73 4624 aa13.89□□□□□ -0.19
HOXA4-204ENST00000610970 C8orf87E5RJ46 101 aa13.89□□□□□ -0.19
HOXA4-204ENST00000610970 KRTAP13-2Q52LG2 175 aa13.87□□□□□ -0.19
HOXA4-204ENST00000610970 A0A087X002 238 aa13.87□□□□□ -0.19
HOXA4-204ENST00000610970 SPINK6Q6UWN8 80 aa13.87□□□□□ -0.19
HOXA4-204ENST00000610970 EPPK1P58107 5090 aaKnown RBP13.86□□□□□ -0.19
HOXA4-204ENST00000610970 NDUFS5O43920 106 aa13.85□□□□□ -0.19
HOXA4-204ENST00000610970 PKD1P98161 4303 aa13.84□□□□□ -0.19
HOXA4-204ENST00000610970 LINC00336Q6ZUF6 198 aa13.84□□□□□ -0.19
HOXA4-204ENST00000610970 NOTCH2NLQ7Z3S9 236 aa13.82□□□□□ -0.2
HOXA4-204ENST00000610970 KRTAP1-4P0C5Y4 121 aa13.81□□□□□ -0.2
HOXA4-204ENST00000610970 LIMD2Q9BT23 127 aa13.79□□□□□ -0.2
HOXA4-204ENST00000610970 PRR4Q16378 134 aa13.77□□□□□ -0.21
HOXA4-204ENST00000610970 IGLV7-46A0A075B6I9 117 aa13.76□□□□□ -0.21
HOXA4-204ENST00000610970 C1orf195Q5TG92 126 aa13.74□□□□□ -0.21
HOXA4-204ENST00000610970 LINC00313P59037 77 aa13.71□□□□□ -0.21
HOXA4-204ENST00000610970 LOC101927531A0A1B0GV80 90 aa13.7□□□□□ -0.22
HOXA4-204ENST00000610970 PLA2G1BP04054 148 aaKnown RBP13.7□□□□□ -0.22
HOXA4-204ENST00000610970 PKHD1P08F94 4074 aa13.69□□□□□ -0.22
HOXA4-204ENST00000610970 Q1T7F1 81 aa13.69□□□□□ -0.22
HOXA4-204ENST00000610970 C4orf48Q5BLP8 95 aa13.69□□□□□ -0.22
HOXA4-204ENST00000610970 MPLKIPQ8TAP9 179 aa13.68□□□□□ -0.22
HOXA4-204ENST00000610970 TYMSOSQ8TAI1 123 aa13.66□□□□□ -0.22
HOXA4-204ENST00000610970 BIRC6Q9NR09 4857 aa13.66□□□□□ -0.22
HOXA4-204ENST00000610970 SPINK1P00995 79 aa13.64□□□□□ -0.23
HOXA4-204ENST00000610970 KRTAP13-3Q3SY46 172 aa13.64□□□□□ -0.23
HOXA4-204ENST00000610970 PCOTHQ58A44 107 aa13.64□□□□□ -0.23
HOXA4-204ENST00000610970 A0A1B0GVY2 172 aa13.63□□□□□ -0.23
HOXA4-204ENST00000610970 Q8N9P0 234 aaPredicted RBP13.62□□□□□ -0.23
HOXA4-204ENST00000610970 V9GYY9 64 aa13.62□□□□□ -0.23
HOXA4-204ENST00000610970 LRP1BQ9NZR2 4599 aa13.62□□□□□ -0.23
HOXA4-204ENST00000610970 DYNC1H1Q14204 4646 aaKnown RBP13.59□□□□□ -0.23
HOXA4-204ENST00000610970 FAM229AH3BQW9 127 aa13.59□□□□□ -0.23
HOXA4-204ENST00000610970 RPS29P62273 56 aaKnown RBP13.59□□□□□ -0.23
HOXA4-204ENST00000610970 Q5W150 140 aa13.59□□□□□ -0.23
HOXA4-204ENST00000610970 SPAG11AQ6PDA7 123 aa13.56□□□□□ -0.24
HOXA4-204ENST00000610970 COA5Q86WW8 74 aa13.53□□□□□ -0.24
HOXA4-204ENST00000610970 KRTAP16-1A8MUX0 517 aa13.51□□□□□ -0.25
HOXA4-204ENST00000610970 LINC00304Q8N9R0 145 aa13.49□□□□□ -0.25
HOXA4-204ENST00000610970 PRR26Q8N8Z3 221 aa13.45□□□□□ -0.26
HOXA4-204ENST00000610970 VPS13BQ7Z7G8 4022 aa13.43□□□□□ -0.26
HOXA4-204ENST00000610970 PRO0628Q9UI54 55 aa13.43□□□□□ -0.26
HOXA4-204ENST00000610970 APOBP04114 4563 aaKnown RBP13.42□□□□□ -0.26
HOXA4-204ENST00000610970 SMR3BP02814 79 aaPredicted RBP13.41□□□□□ -0.26
HOXA4-204ENST00000610970 IGKV2-30P06310 120 aa13.39□□□□□ -0.27
HOXA4-204ENST00000610970 KRTAP10-4P60372 401 aaPredicted RBP13.38□□□□□ -0.27
HOXA4-204ENST00000610970 HRES1P13985 223 aa13.36□□□□□ -0.27
HOXA4-204ENST00000610970 KIAA1109Q2LD37 5005 aa13.35□□□□□ -0.27
HOXA4-204ENST00000610970 PSPHP1O15172 72 aa13.33□□□□□ -0.28
HOXA4-204ENST00000610970 ACYP2P14621 99 aa13.32□□□□□ -0.28
HOXA4-204ENST00000610970 BRK1Q8WUW1 75 aa13.32□□□□□ -0.28
HOXA4-204ENST00000610970 A8MUN3 132 aa13.29□□□□□ -0.28
HOXA4-204ENST00000610970 DMAC1Q96GE9 116 aa13.28□□□□□ -0.28
HOXA4-204ENST00000610970 RETNLBQ9BQ08 111 aa13.28□□□□□ -0.28
HOXA4-204ENST00000610970 Q5VV11 94 aa13.24□□□□□ -0.29
HOXA4-204ENST00000610970 LINC01558Q9Y6Z2 57 aa13.24□□□□□ -0.29
HOXA4-204ENST00000610970 FAT1Q14517 4588 aa13.24□□□□□ -0.29
HOXA4-204ENST00000610970 HERC2O95714 4834 aa13.23□□□□□ -0.29
HOXA4-204ENST00000610970 PRR15LQ9BU68 103 aa13.21□□□□□ -0.3
HOXA4-204ENST00000610970 HSPG2P98160 4391 aa13.17□□□□□ -0.3
HOXA4-204ENST00000610970 RYR1P21817 5038 aa13.17□□□□□ -0.3
HOXA4-204ENST00000610970 Q75L30 129 aa13.16□□□□□ -0.3
HOXA4-204ENST00000610970 IGKV2D-30A0A075B6S6 120 aa13.15□□□□□ -0.3
HOXA4-204ENST00000610970 CHKB-CPT1BH3BT56 60 aa13.11□□□□□ -0.31
HOXA4-204ENST00000610970 C7orf65Q6ZTY9 151 aa13.1□□□□□ -0.31
HOXA4-204ENST00000610970 C20orf166-AS1Q96NR2 134 aa13.09□□□□□ -0.31
HOXA4-204ENST00000610970 A8MUU9 505 aa13.08□□□□□ -0.32
HOXA4-204ENST00000610970 KRTAP17-1Q9BYP8 105 aa13.05□□□□□ -0.32
HOXA4-204ENST00000610970 PCLOQ9Y6V0 5065 aa13.01□□□□□ -0.33
HOXA4-204ENST00000610970 PKHD1L1Q86WI1 4243 aa13.01□□□□□ -0.33
HOXA4-204ENST00000610970 C9orf92A6NGG3 77 aa12.97□□□□□ -0.33
HOXA4-204ENST00000610970 KRTAP4-5Q9BYR2 181 aa12.96□□□□□ -0.34
HOXA4-204ENST00000610970 A6NED7 52 aa12.95□□□□□ -0.34
HOXA4-204ENST00000610970 KRTAP10-8P60410 259 aa12.93□□□□□ -0.34
HOXA4-204ENST00000610970 ABCA13Q86UQ4 5058 aa12.92□□□□□ -0.34
HOXA4-204ENST00000610970 Q5VSD8 79 aa12.91□□□□□ -0.34
HOXA4-204ENST00000610970 Q8N1X5 172 aa12.88□□□□□ -0.35
HOXA4-204ENST00000610970 CDC42SE1Q9NRR8 79 aa12.85□□□□□ -0.35
HOXA4-204ENST00000610970 LCA10Q71F78 164 aa12.82□□□□□ -0.36
HOXA4-204ENST00000610970 A0A1B0GU69 56 aa12.79□□□□□ -0.36
HOXA4-204ENST00000610970 ATP11AUNQ6ZP68 121 aa12.78□□□□□ -0.36
HOXA4-204ENST00000610970 FLG2Q5D862 2391 aaPredicted RBP12.77□□□□□ -0.37
HOXA4-204ENST00000610970 SPINK7P58062 85 aa12.76□□□□□ -0.37
HOXA4-204ENST00000610970 SPTSSBQ8NFR3 76 aa12.74□□□□□ -0.37
HOXA4-204ENST00000610970 A8MU10 97 aa12.74□□□□□ -0.37
HOXA4-204ENST00000610970 LRP1Q07954 4544 aaKnown RBP12.69□□□□□ -0.38
HOXA4-204ENST00000610970 PMAIP1Q13794 54 aa12.63□□□□□ -0.39
HOXA4-204ENST00000610970 FAT3Q8TDW7 4589 aa12.63□□□□□ -0.39
HOXA4-204ENST00000610970 MYCBP2O75592 4640 aa12.62□□□□□ -0.39
HOXA4-204ENST00000610970 KRTAP3-1Q9BYR8 98 aa12.59□□□□□ -0.39
HOXA4-204ENST00000610970 RPL37P61927 97 aaKnown RBP12.58□□□□□ -0.4
HOXA4-204ENST00000610970 TNXBP22105 4242 aa12.57□□□□□ -0.4
HOXA4-204ENST00000610970 COX6B2Q6YFQ2 88 aa12.57□□□□□ -0.4
HOXA4-204ENST00000610970 SEC61GP60059 68 aa12.56□□□□□ -0.4
HOXA4-204ENST00000610970 UQCR11O14957 56 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms