RNA–Protein interactions for RNA: ENST00000610705.1

AP004609.3-201, humanhuman

BASIC

Gene AP004609.3, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.3-201ENST00000610705 KRTAP10-8P60410 259 aa14.01□□□□□ -0.17
AP004609.3-201ENST00000610705 SMIM20Q8N5G0 67 aa14.01□□□□□ -0.17
AP004609.3-201ENST00000610705 SERP2Q8N6R1 65 aa14.01□□□□□ -0.17
AP004609.3-201ENST00000610705 C8orf17Q9NRJ1 99 aa14.01□□□□□ -0.17
AP004609.3-201ENST00000610705 KRTAP29-1A8MX34 341 aaPredicted RBP13.99□□□□□ -0.17
AP004609.3-201ENST00000610705 UQCRQO14949 82 aa13.99□□□□□ -0.17
AP004609.3-201ENST00000610705 COX7CP15954 63 aa13.98□□□□□ -0.17
AP004609.3-201ENST00000610705 TRAV7A0A075B6U4 112 aa13.97□□□□□ -0.17
AP004609.3-201ENST00000610705 hDV103S1A0JD37 113 aa13.97□□□□□ -0.17
AP004609.3-201ENST00000610705 NOTCH2NLQ7Z3S9 236 aa13.95□□□□□ -0.18
AP004609.3-201ENST00000610705 OCR1Q9BZK8 76 aa13.93□□□□□ -0.18
AP004609.3-201ENST00000610705 LRP1Q07954 4544 aaKnown RBP13.91□□□□□ -0.18
AP004609.3-201ENST00000610705 C8orf87E5RJ46 101 aa13.91□□□□□ -0.18
AP004609.3-201ENST00000610705 KRTAP4-5Q9BYR2 181 aa13.9□□□□□ -0.18
AP004609.3-201ENST00000610705 LINC00313P59037 77 aa13.87□□□□□ -0.19
AP004609.3-201ENST00000610705 FLG2Q5D862 2391 aaPredicted RBP13.87□□□□□ -0.19
AP004609.3-201ENST00000610705 TMEM254Q8TBM7 123 aa13.86□□□□□ -0.19
AP004609.3-201ENST00000610705 MRPL34Q9BQ48 92 aaKnown RBP13.85□□□□□ -0.19
AP004609.3-201ENST00000610705 RETNLBQ9BQ08 111 aa13.84□□□□□ -0.19
AP004609.3-201ENST00000610705 FAT3Q8TDW7 4589 aa13.84□□□□□ -0.19
AP004609.3-201ENST00000610705 TNXBP22105 4242 aa13.83□□□□□ -0.2
AP004609.3-201ENST00000610705 MT1HL1P0DM35 61 aa13.82□□□□□ -0.2
AP004609.3-201ENST00000610705 NDUFS5O43920 106 aa13.8□□□□□ -0.2
AP004609.3-201ENST00000610705 OXTP01178 125 aa13.8□□□□□ -0.2
AP004609.3-201ENST00000610705 C20orf197Q8N268 126 aa13.78□□□□□ -0.2
AP004609.3-201ENST00000610705 BIRC6Q9NR09 4857 aa13.77□□□□□ -0.21
AP004609.3-201ENST00000610705 MYCBP2O75592 4640 aa13.73□□□□□ -0.21
AP004609.3-201ENST00000610705 TP53AIP1Q9HCN2 124 aa13.72□□□□□ -0.21
AP004609.3-201ENST00000610705 C5orf47Q569G3 176 aa13.7□□□□□ -0.22
AP004609.3-201ENST00000610705 CYSTM1Q9H1C7 97 aa13.7□□□□□ -0.22
AP004609.3-201ENST00000610705 KRTAP16-1A8MUX0 517 aa13.69□□□□□ -0.22
AP004609.3-201ENST00000610705 SNURFQ9Y675 71 aa13.68□□□□□ -0.22
AP004609.3-201ENST00000610705 C9orf92A6NGG3 77 aa13.65□□□□□ -0.22
AP004609.3-201ENST00000610705 H0Y9P7 68 aa13.64□□□□□ -0.23
AP004609.3-201ENST00000610705 MP68P56378 58 aa13.64□□□□□ -0.23
AP004609.3-201ENST00000610705 Q8N9P0 234 aaPredicted RBP13.63□□□□□ -0.23
AP004609.3-201ENST00000610705 KLKP1Q107X0 134 aa13.63□□□□□ -0.23
AP004609.3-201ENST00000610705 TRAV22A0A0B4J277 110 aa13.62□□□□□ -0.23
AP004609.3-201ENST00000610705 A0A0U1RQV1 116 aa13.62□□□□□ -0.23
AP004609.3-201ENST00000610705 DMBT1Q9UGM3 2413 aaPredicted RBP13.61□□□□□ -0.23
AP004609.3-201ENST00000610705 FP248Q71RG6 208 aaPredicted RBP13.61□□□□□ -0.23
AP004609.3-201ENST00000610705 HERC2O95714 4834 aa13.59□□□□□ -0.23
AP004609.3-201ENST00000610705 LINC00208Q96KT6 92 aa13.57□□□□□ -0.24
AP004609.3-201ENST00000610705 TMEM258P61165 79 aa13.56□□□□□ -0.24
AP004609.3-201ENST00000610705 IGLV7-46A0A075B6I9 117 aa13.53□□□□□ -0.24
AP004609.3-201ENST00000610705 ABCA13Q86UQ4 5058 aa13.52□□□□□ -0.25
AP004609.3-201ENST00000610705 H3BPC8 53 aa13.52□□□□□ -0.25
AP004609.3-201ENST00000610705 J3QL48 77 aa13.51□□□□□ -0.25
AP004609.3-201ENST00000610705 Q5W150 140 aa13.51□□□□□ -0.25
AP004609.3-201ENST00000610705 C1orf64Q8NEQ6 169 aa13.5□□□□□ -0.25
AP004609.3-201ENST00000610705 ZCCHC13Q8WW36 166 aaKnown RBP13.5□□□□□ -0.25
AP004609.3-201ENST00000610705 NDUFC1O43677 76 aa13.47□□□□□ -0.25
AP004609.3-201ENST00000610705 PRR4Q16378 134 aa13.47□□□□□ -0.25
AP004609.3-201ENST00000610705 H7BZZ5 65 aa13.46□□□□□ -0.26
AP004609.3-201ENST00000610705 KRTAP13-3Q3SY46 172 aa13.44□□□□□ -0.26
AP004609.3-201ENST00000610705 C20orf166-AS1Q96NR2 134 aa13.44□□□□□ -0.26
AP004609.3-201ENST00000610705 A8MUU9 505 aa13.42□□□□□ -0.26
AP004609.3-201ENST00000610705 LOC101927531A0A1B0GV80 90 aa13.36□□□□□ -0.27
AP004609.3-201ENST00000610705 RPS28P62857 69 aaKnown RBP13.33□□□□□ -0.28
AP004609.3-201ENST00000610705 Q75L30 129 aa13.32□□□□□ -0.28
AP004609.3-201ENST00000610705 FAM236DA0A1B0GTK5 79 aa13.31□□□□□ -0.28
AP004609.3-201ENST00000610705 FAM236CP0DP71 79 aa13.31□□□□□ -0.28
AP004609.3-201ENST00000610705 PCOTHQ58A44 107 aa13.29□□□□□ -0.28
AP004609.3-201ENST00000610705 XP32Q5T750 250 aa13.28□□□□□ -0.28
AP004609.3-201ENST00000610705 CYP4F30PQ9H0H9 118 aa13.26□□□□□ -0.29
AP004609.3-201ENST00000610705 IGKV2-30P06310 120 aa13.25□□□□□ -0.29
AP004609.3-201ENST00000610705 IGKV2D-30A0A075B6S6 120 aa13.24□□□□□ -0.29
AP004609.3-201ENST00000610705 TPRXLQ17RH7 258 aa13.24□□□□□ -0.29
AP004609.3-201ENST00000610705 RPL37P61927 97 aaKnown RBP13.21□□□□□ -0.3
AP004609.3-201ENST00000610705 ATP5EP56381 51 aaPredicted RBP13.2□□□□□ -0.3
AP004609.3-201ENST00000610705 ATP11AUNQ6ZP68 121 aa13.18□□□□□ -0.3
AP004609.3-201ENST00000610705 C7orf65Q6ZTY9 151 aa13.14□□□□□ -0.31
AP004609.3-201ENST00000610705 SPANXA2-OT1Q8N9U9 137 aa13.14□□□□□ -0.31
AP004609.3-201ENST00000610705 SERP1Q9Y6X1 66 aa13.13□□□□□ -0.31
AP004609.3-201ENST00000610705 HRES1P13985 223 aa13.07□□□□□ -0.32
AP004609.3-201ENST00000610705 PCLOQ9Y6V0 5065 aa13.03□□□□□ -0.32
AP004609.3-201ENST00000610705 SPINK7P58062 85 aa13.03□□□□□ -0.32
AP004609.3-201ENST00000610705 LPAP08519 4548 aa12.95□□□□□ -0.34
AP004609.3-201ENST00000610705 C4orf26Q17RF5 130 aa12.88□□□□□ -0.35
AP004609.3-201ENST00000610705 SMIM26A0A096LP01 95 aa12.85□□□□□ -0.35
AP004609.3-201ENST00000610705 DMAC1Q96GE9 116 aa12.85□□□□□ -0.35
AP004609.3-201ENST00000610705 LRP2P98164 4655 aa12.84□□□□□ -0.35
AP004609.3-201ENST00000610705 SEC61BP60468 96 aaKnown RBP12.81□□□□□ -0.36
AP004609.3-201ENST00000610705 ACYP2P14621 99 aa12.8□□□□□ -0.36
AP004609.3-201ENST00000610705 COA5Q86WW8 74 aa12.79□□□□□ -0.36
AP004609.3-201ENST00000610705 HERC1Q15751 4861 aa12.72□□□□□ -0.37
AP004609.3-201ENST00000610705 A8MUN3 132 aa12.7□□□□□ -0.38
AP004609.3-201ENST00000610705 COX6B2Q6YFQ2 88 aa12.68□□□□□ -0.38
AP004609.3-201ENST00000610705 KRTAP3-1Q9BYR8 98 aa12.65□□□□□ -0.38
AP004609.3-201ENST00000610705 CHKB-CPT1BH3BT56 60 aa12.64□□□□□ -0.39
AP004609.3-201ENST00000610705 HMCN2Q8NDA2 5059 aa12.59□□□□□ -0.39
AP004609.3-201ENST00000610705 MPLKIPQ8TAP9 179 aa12.55□□□□□ -0.4
AP004609.3-201ENST00000610705 KRTAP4-1Q9BYQ7 146 aa12.52□□□□□ -0.41
AP004609.3-201ENST00000610705 RBM12B-AS1Q9P1G2 102 aa12.52□□□□□ -0.41
AP004609.3-201ENST00000610705 Q1T7F1 81 aa12.5□□□□□ -0.41
AP004609.3-201ENST00000610705 MUC17Q685J3 4493 aa12.48□□□□□ -0.41
AP004609.3-201ENST00000610705 H1FX-AS1Q4G0G2 97 aa12.38□□□□□ -0.43
AP004609.3-201ENST00000610705 V9GYY9 64 aa12.38□□□□□ -0.43
AP004609.3-201ENST00000610705 SPTSSBQ8NFR3 76 aa12.34□□□□□ -0.43
AP004609.3-201ENST00000610705 SVIPQ8NHG7 77 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms