RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
USP6NL-205ENST00000609104 SETXQ7Z333 2677 aaKnown RBP7.31□□□□□ -1.24
USP6NL-205ENST00000609104 KRTAP7-1Q8IUC3 87 aa7.3□□□□□ -1.24
USP6NL-205ENST00000609104 SPTBN5Q9NRC6 3674 aaKnown RBP7.3□□□□□ -1.24
USP6NL-205ENST00000609104 NBEAQ8NFP9 2946 aa7.29□□□□□ -1.24
USP6NL-205ENST00000609104 TNP1P09430 55 aa7.28□□□□□ -1.24
USP6NL-205ENST00000609104 ADGRG4Q8IZF6 3080 aa7.28□□□□□ -1.24
USP6NL-205ENST00000609104 ITPR1Q14643 2758 aa7.28□□□□□ -1.24
USP6NL-205ENST00000609104 ATMQ13315 3056 aa7.27□□□□□ -1.25
USP6NL-205ENST00000609104 KRTAP13-2Q52LG2 175 aa7.26□□□□□ -1.25
USP6NL-205ENST00000609104 WDFY3Q8IZQ1 3526 aa7.26□□□□□ -1.25
USP6NL-205ENST00000609104 Q6ZRN7 208 aaPredicted RBP7.24□□□□□ -1.25
USP6NL-205ENST00000609104 UBR5O95071 2799 aaPredicted RBP7.22□□□□□ -1.25
USP6NL-205ENST00000609104 MYO15AQ9UKN7 3530 aa7.22□□□□□ -1.25
USP6NL-205ENST00000609104 DCHS1Q96JQ0 3298 aa7.21□□□□□ -1.26
USP6NL-205ENST00000609104 ZZEF1O43149 2961 aa7.21□□□□□ -1.26
USP6NL-205ENST00000609104 NSD1Q96L73 2696 aaPredicted RBP7.2□□□□□ -1.26
USP6NL-205ENST00000609104 TACC2O95359 2948 aa7.2□□□□□ -1.26
USP6NL-205ENST00000609104 KRTAP13-1Q8IUC0 172 aa7.19□□□□□ -1.26
USP6NL-205ENST00000609104 UTP20O75691 2785 aaKnown RBP7.18□□□□□ -1.26
USP6NL-205ENST00000609104 DMXL1Q9Y485 3027 aa7.17□□□□□ -1.26
USP6NL-205ENST00000609104 ASPMQ8IZT6 3477 aa7.13□□□□□ -1.27
USP6NL-205ENST00000609104 LOC400499M0QZD8 3231 aa7.12□□□□□ -1.27
USP6NL-205ENST00000609104 EYSQ5T1H1 3165 aa7.12□□□□□ -1.27
USP6NL-205ENST00000609104 BAHCC1Q9P281 2608 aa7.11□□□□□ -1.27
USP6NL-205ENST00000609104 HIVEP1P15822 2718 aa7.08□□□□□ -1.28
USP6NL-205ENST00000609104 TNRC18O15417 2968 aaPredicted RBP7.08□□□□□ -1.28
USP6NL-205ENST00000609104 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
USP6NL-205ENST00000609104 IGSF10Q6WRI0 2623 aa7.04□□□□□ -1.28
USP6NL-205ENST00000609104 CELSR2Q9HCU4 2923 aa7.02□□□□□ -1.29
USP6NL-205ENST00000609104 A0A1B0GVY2 172 aa7.02□□□□□ -1.29
USP6NL-205ENST00000609104 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
USP6NL-205ENST00000609104 H0YAA0 97 aa7□□□□□ -1.29
USP6NL-205ENST00000609104 LAMA5O15230 3695 aa6.99□□□□□ -1.29
USP6NL-205ENST00000609104 CSMD1Q96PZ7 3565 aa6.96□□□□□ -1.3
USP6NL-205ENST00000609104 P0C880 135 aa6.91□□□□□ -1.3
USP6NL-205ENST00000609104 NBPF19A0A087WUL8 3843 aa6.91□□□□□ -1.3
USP6NL-205ENST00000609104 XP32Q5T750 250 aa6.9□□□□□ -1.3
USP6NL-205ENST00000609104 CELSR1Q9NYQ6 3014 aa6.9□□□□□ -1.3
USP6NL-205ENST00000609104 DCHS2Q6V1P9 2916 aa6.85□□□□□ -1.31
USP6NL-205ENST00000609104 ZFHX4Q86UP3 3567 aa6.85□□□□□ -1.31
USP6NL-205ENST00000609104 KRTAP1-4P0C5Y4 121 aa6.81□□□□□ -1.32
USP6NL-205ENST00000609104 KRTAP10-10P60014 251 aa6.8□□□□□ -1.32
USP6NL-205ENST00000609104 FBN2P35556 2912 aa6.78□□□□□ -1.32
USP6NL-205ENST00000609104 RELNP78509 3460 aa6.76□□□□□ -1.33
USP6NL-205ENST00000609104 TENM1Q9UKZ4 2725 aa6.75□□□□□ -1.33
USP6NL-205ENST00000609104 PRO2289Q9P1D8 64 aa6.74□□□□□ -1.33
USP6NL-205ENST00000609104 TGP01266 2768 aa6.7□□□□□ -1.34
USP6NL-205ENST00000609104 FLNCQ14315 2725 aa6.7□□□□□ -1.34
USP6NL-205ENST00000609104 TPRXLQ17RH7 258 aa6.7□□□□□ -1.34
USP6NL-205ENST00000609104 NF1P21359 2839 aa6.67□□□□□ -1.34
USP6NL-205ENST00000609104 ZANQ9Y493 2812 aa6.66□□□□□ -1.34
USP6NL-205ENST00000609104 NIPBLQ6KC79 2804 aaeCLIP6.66□□□□□ -1.34
USP6NL-205ENST00000609104 SPENQ96T58 3664 aaKnown RBP6.65□□□□□ -1.35
USP6NL-205ENST00000609104 HRNRQ86YZ3 2850 aaPredicted RBP6.64□□□□□ -1.35
USP6NL-205ENST00000609104 SMG1Q96Q15 3661 aaKnown RBP6.62□□□□□ -1.35
USP6NL-205ENST00000609104 DMDP11532 3685 aa6.61□□□□□ -1.35
USP6NL-205ENST00000609104 KRTAP13-3Q3SY46 172 aa6.6□□□□□ -1.35
USP6NL-205ENST00000609104 KRTAP12-2P59991 146 aa6.59□□□□□ -1.35
USP6NL-205ENST00000609104 KRTAP21-3Q3LHN1 58 aa6.57□□□□□ -1.36
USP6NL-205ENST00000609104 TENM4Q6N022 2769 aa6.56□□□□□ -1.36
USP6NL-205ENST00000609104 SVEP1Q4LDE5 3571 aa6.52□□□□□ -1.37
USP6NL-205ENST00000609104 TENM3Q9P273 2699 aa6.51□□□□□ -1.37
USP6NL-205ENST00000609104 PDZD2O15018 2839 aa6.51□□□□□ -1.37
USP6NL-205ENST00000609104 MXRA5Q9NR99 2828 aa6.5□□□□□ -1.37
USP6NL-205ENST00000609104 CUBNO60494 3623 aa6.5□□□□□ -1.37
USP6NL-205ENST00000609104 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
USP6NL-205ENST00000609104 KRTAP12-1P59990 96 aa6.4□□□□□ -1.38
USP6NL-205ENST00000609104 ZFHX3Q15911 3703 aa6.4□□□□□ -1.38
USP6NL-205ENST00000609104 PKD1L1Q8TDX9 2849 aa6.4□□□□□ -1.39
USP6NL-205ENST00000609104 TENM2Q9NT68 2774 aa6.38□□□□□ -1.39
USP6NL-205ENST00000609104 VWFP04275 2813 aa6.38□□□□□ -1.39
USP6NL-205ENST00000609104 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
USP6NL-205ENST00000609104 VPS13CQ709C8 3753 aa6.25□□□□□ -1.41
USP6NL-205ENST00000609104 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
USP6NL-205ENST00000609104 BSNQ9UPA5 3926 aa6.21□□□□□ -1.42
USP6NL-205ENST00000609104 TRRAPQ9Y4A5 3859 aa6.19□□□□□ -1.42
USP6NL-205ENST00000609104 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
USP6NL-205ENST00000609104 MUC3AQ02505 3323 aa6.17□□□□□ -1.42
USP6NL-205ENST00000609104 MEGF8Q7Z7M0 2845 aa6.15□□□□□ -1.43
USP6NL-205ENST00000609104 CSMD2Q7Z408 3487 aa6.14□□□□□ -1.43
USP6NL-205ENST00000609104 COL7A1Q02388 2944 aa6.12□□□□□ -1.43
USP6NL-205ENST00000609104 CSMD3Q7Z407 3707 aa6.11□□□□□ -1.43
USP6NL-205ENST00000609104 ANK3Q12955 4377 aaKnown RBP6.11□□□□□ -1.43
USP6NL-205ENST00000609104 KRTAP10-6P60371 365 aaPredicted RBP6.07□□□□□ -1.44
USP6NL-205ENST00000609104 FBN3Q75N90 2809 aa6.06□□□□□ -1.44
USP6NL-205ENST00000609104 INE1O15225 51 aa6.01□□□□□ -1.45
USP6NL-205ENST00000609104 CRCT1Q9UGL9 99 aa6.01□□□□□ -1.45
USP6NL-205ENST00000609104 AKAP9Q99996 3911 aa5.99□□□□□ -1.45
USP6NL-205ENST00000609104 FBN1P35555 2871 aaKnown RBP5.97□□□□□ -1.45
USP6NL-205ENST00000609104 HUWE1Q7Z6Z7 4374 aaKnown RBP5.95□□□□□ -1.46
USP6NL-205ENST00000609104 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
USP6NL-205ENST00000609104 OTOGQ6ZRI0 2925 aa5.87□□□□□ -1.47
USP6NL-205ENST00000609104 KRTAP3-3Q9BYR6 98 aa5.82□□□□□ -1.48
USP6NL-205ENST00000609104 KRTAP3-2Q9BYR7 98 aa5.81□□□□□ -1.48
USP6NL-205ENST00000609104 ZNF469Q96JG9 3925 aaPredicted RBP5.72□□□□□ -1.49
USP6NL-205ENST00000609104 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
USP6NL-205ENST00000609104 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
USP6NL-205ENST00000609104 MT1HL1P0DM35 61 aa5.68□□□□□ -1.5
USP6NL-205ENST00000609104 ALMS1Q8TCU4 4167 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms