RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LINC01556Q5JQF7 62 aa1.42□□□□□ -2.18
LINC00397-202ENST00000606785 NAV2Q8IVL1 2488 aa1.42□□□□□ -2.18
LINC00397-202ENST00000606785 VPS13DQ5THJ4 4388 aa1.41□□□□□ -2.18
LINC00397-202ENST00000606785 TNP1P09430 55 aa1.41□□□□□ -2.18
LINC00397-202ENST00000606785 DEFB133Q30KQ1 61 aa1.41□□□□□ -2.18
LINC00397-202ENST00000606785 TTC28Q96AY4 2481 aa1.41□□□□□ -2.18
LINC00397-202ENST00000606785 CEP250Q9BV73 2442 aa1.4□□□□□ -2.18
LINC00397-202ENST00000606785 RANBP2P49792 3224 aaKnown RBP1.4□□□□□ -2.19
LINC00397-202ENST00000606785 FCGBPQ9Y6R7 5405 aaPredicted RBP1.39□□□□□ -2.19
LINC00397-202ENST00000606785 PRUNE2Q8WUY3 3088 aa1.39□□□□□ -2.19
LINC00397-202ENST00000606785 CREBBPQ92793 2442 aa1.39□□□□□ -2.19
LINC00397-202ENST00000606785 DEFB135Q30KP9 77 aa1.38□□□□□ -2.19
LINC00397-202ENST00000606785 DMBT1Q9UGM3 2413 aaPredicted RBP1.38□□□□□ -2.19
LINC00397-202ENST00000606785 FRYLO94915 3013 aa1.37□□□□□ -2.19
LINC00397-202ENST00000606785 CFAP54Q96N23 3096 aa1.37□□□□□ -2.19
LINC00397-202ENST00000606785 NBASA2RRP1 2371 aa1.36□□□□□ -2.19
LINC00397-202ENST00000606785 MAP1AP78559 2803 aaPredicted RBP1.36□□□□□ -2.19
LINC00397-202ENST00000606785 SETD2Q9BYW2 2564 aaPredicted RBP1.36□□□□□ -2.19
LINC00397-202ENST00000606785 FBN3Q75N90 2809 aa1.35□□□□□ -2.19
LINC00397-202ENST00000606785 ITPR1Q14643 2758 aa1.35□□□□□ -2.19
LINC00397-202ENST00000606785 HECTD1Q9ULT8 2610 aa1.35□□□□□ -2.19
LINC00397-202ENST00000606785 ITPR3Q14573 2671 aa1.34□□□□□ -2.2
LINC00397-202ENST00000606785 BOD1L1Q8NFC6 3051 aa1.34□□□□□ -2.2
LINC00397-202ENST00000606785 ZZEF1O43149 2961 aa1.34□□□□□ -2.2
LINC00397-202ENST00000606785 FRYQ5TBA9 3013 aa1.34□□□□□ -2.2
LINC00397-202ENST00000606785 CHD9Q3L8U1 2897 aa1.33□□□□□ -2.2
LINC00397-202ENST00000606785 C9orf92A6NGG3 77 aa1.33□□□□□ -2.2
LINC00397-202ENST00000606785 LRBAP50851 2863 aa1.33□□□□□ -2.2
LINC00397-202ENST00000606785 TENM1Q9UKZ4 2725 aa1.32□□□□□ -2.2
LINC00397-202ENST00000606785 PDZD2O15018 2839 aa1.32□□□□□ -2.2
LINC00397-202ENST00000606785 C5orf42Q9H799 3197 aa1.32□□□□□ -2.2
LINC00397-202ENST00000606785 DNAH11Q96DT5 4516 aa1.32□□□□□ -2.2
LINC00397-202ENST00000606785 M0R2T5 61 aa1.31□□□□□ -2.2
LINC00397-202ENST00000606785 ZFHX4Q86UP3 3567 aa1.31□□□□□ -2.2
LINC00397-202ENST00000606785 USP9YO00507 2555 aaPredicted RBP1.31□□□□□ -2.2
LINC00397-202ENST00000606785 POLQO75417 2590 aa1.31□□□□□ -2.2
LINC00397-202ENST00000606785 NF1P21359 2839 aa1.3□□□□□ -2.2
LINC00397-202ENST00000606785 PTPN13Q12923 2485 aa1.3□□□□□ -2.2
LINC00397-202ENST00000606785 NCOR2Q9Y618 2525 aa1.3□□□□□ -2.2
LINC00397-202ENST00000606785 HTN3P15516 51 aa1.3□□□□□ -2.2
LINC00397-202ENST00000606785 RPS29P62273 56 aaKnown RBP1.3□□□□□ -2.2
LINC00397-202ENST00000606785 DCHS2Q6V1P9 2916 aa1.3□□□□□ -2.2
LINC00397-202ENST00000606785 TRIOO75962 3097 aa1.3□□□□□ -2.2
LINC00397-202ENST00000606785 MYCBP2O75592 4640 aa1.3□□□□□ -2.2
LINC00397-202ENST00000606785 PIEZO1Q92508 2521 aa1.29□□□□□ -2.2
LINC00397-202ENST00000606785 USP24Q9UPU5 2620 aa1.29□□□□□ -2.2
LINC00397-202ENST00000606785 KRTAP2-3P0C7H8 128 aa1.29□□□□□ -2.2
LINC00397-202ENST00000606785 KRTAP2-4Q9BYR9 128 aa1.29□□□□□ -2.2
LINC00397-202ENST00000606785 KRTAP2-1Q9BYU5 128 aa1.29□□□□□ -2.2
LINC00397-202ENST00000606785 NBPF19A0A087WUL8 3843 aa1.29□□□□□ -2.2
LINC00397-202ENST00000606785 DMXL1Q9Y485 3027 aa1.29□□□□□ -2.2
LINC00397-202ENST00000606785 AKAP9Q99996 3911 aa1.28□□□□□ -2.2
LINC00397-202ENST00000606785 COL7A1Q02388 2944 aa1.28□□□□□ -2.2
LINC00397-202ENST00000606785 HTTP42858 3142 aa1.28□□□□□ -2.2
LINC00397-202ENST00000606785 SRCAPQ6ZRS2 3230 aa1.28□□□□□ -2.2
LINC00397-202ENST00000606785 HIVEP3Q5T1R4 2406 aa1.28□□□□□ -2.2
LINC00397-202ENST00000606785 ATRQ13535 2644 aa1.28□□□□□ -2.2
LINC00397-202ENST00000606785 TENM4Q6N022 2769 aa1.28□□□□□ -2.2
LINC00397-202ENST00000606785 RELNP78509 3460 aa1.27□□□□□ -2.21
LINC00397-202ENST00000606785 MKI67P46013 3256 aaKnown RBP1.27□□□□□ -2.21
LINC00397-202ENST00000606785 VPS13AQ96RL7 3174 aa1.27□□□□□ -2.21
LINC00397-202ENST00000606785 ANKHD1Q8IWZ3 2542 aaKnown RBP1.27□□□□□ -2.21
LINC00397-202ENST00000606785 ATMQ13315 3056 aa1.26□□□□□ -2.21
LINC00397-202ENST00000606785 BDP1A6H8Y1 2624 aa1.26□□□□□ -2.21
LINC00397-202ENST00000606785 LRRK2Q5S007 2527 aa1.26□□□□□ -2.21
LINC00397-202ENST00000606785 DNAH12Q6ZR08 3092 aa1.26□□□□□ -2.21
LINC00397-202ENST00000606785 U3KQA8 63 aa1.26□□□□□ -2.21
LINC00397-202ENST00000606785 CFAP47Q6ZTR5 3102 aa1.26□□□□□ -2.21
LINC00397-202ENST00000606785 SPG11Q96JI7 2443 aa1.26□□□□□ -2.21
LINC00397-202ENST00000606785 APCP25054 2843 aa1.25□□□□□ -2.21
LINC00397-202ENST00000606785 CACNA1AO00555 2505 aa1.25□□□□□ -2.21
LINC00397-202ENST00000606785 RIF1Q5UIP0 2472 aaKnown RBP1.24□□□□□ -2.21
LINC00397-202ENST00000606785 NIPBLQ6KC79 2804 aaeCLIP1.24□□□□□ -2.21
LINC00397-202ENST00000606785 SZT2Q5T011 3432 aa1.24□□□□□ -2.21
LINC00397-202ENST00000606785 SETXQ7Z333 2677 aaKnown RBP1.23□□□□□ -2.21
LINC00397-202ENST00000606785 SACSQ9NZJ4 4579 aa1.23□□□□□ -2.21
LINC00397-202ENST00000606785 DEFB4AO15263 64 aa1.23□□□□□ -2.21
LINC00397-202ENST00000606785 DNAH8Q96JB1 4490 aa1.23□□□□□ -2.21
LINC00397-202ENST00000606785 FLNCQ14315 2725 aa1.23□□□□□ -2.21
LINC00397-202ENST00000606785 COL12A1Q99715 3063 aa1.22□□□□□ -2.21
LINC00397-202ENST00000606785 KRTAP8-1Q8IUC2 63 aa1.22□□□□□ -2.21
LINC00397-202ENST00000606785 SMR3AQ99954 134 aa1.22□□□□□ -2.21
LINC00397-202ENST00000606785 EPG5Q9HCE0 2579 aa1.22□□□□□ -2.21
LINC00397-202ENST00000606785 WDFY4Q6ZS81 3184 aa1.22□□□□□ -2.21
LINC00397-202ENST00000606785 GOLGB1Q14789 3259 aaKnown RBP1.21□□□□□ -2.21
LINC00397-202ENST00000606785 SONP18583 2426 aaKnown RBP1.21□□□□□ -2.22
LINC00397-202ENST00000606785 KALRNO60229 2985 aa1.21□□□□□ -2.22
LINC00397-202ENST00000606785 FAM186AA6NE01 2351 aa1.21□□□□□ -2.22
LINC00397-202ENST00000606785 GCN1Q92616 2671 aaKnown RBP1.21□□□□□ -2.22
LINC00397-202ENST00000606785 CELSR3Q9NYQ7 3312 aa1.2□□□□□ -2.22
LINC00397-202ENST00000606785 DMXL2Q8TDJ6 3036 aa1.2□□□□□ -2.22
LINC00397-202ENST00000606785 DCHS1Q96JQ0 3298 aa1.2□□□□□ -2.22
LINC00397-202ENST00000606785 CFAP46Q8IYW2 2715 aa1.19□□□□□ -2.22
LINC00397-202ENST00000606785 CSMD3Q7Z407 3707 aa1.19□□□□□ -2.22
LINC00397-202ENST00000606785 TGP01266 2768 aa1.19□□□□□ -2.22
LINC00397-202ENST00000606785 FBN2P35556 2912 aa1.18□□□□□ -2.22
LINC00397-202ENST00000606785 UTP20O75691 2785 aaKnown RBP1.18□□□□□ -2.22
LINC00397-202ENST00000606785 SPEGQ15772 3267 aa1.18□□□□□ -2.22
LINC00397-202ENST00000606785 UTRNP46939 3433 aa1.18□□□□□ -2.22
LINC00397-202ENST00000606785 SPENQ96T58 3664 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms