RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 FBN2P35556 2912 aa8.69□□□□□ -1.02
SYMPK-213ENST00000599460 LINC01558Q9Y6Z2 57 aa8.68□□□□□ -1.02
SYMPK-213ENST00000599460 Q5W150 140 aa8.67□□□□□ -1.02
SYMPK-213ENST00000599460 ZFHX4Q86UP3 3567 aa8.67□□□□□ -1.02
SYMPK-213ENST00000599460 NF1P21359 2839 aa8.66□□□□□ -1.02
SYMPK-213ENST00000599460 DCHS1Q96JQ0 3298 aa8.66□□□□□ -1.02
SYMPK-213ENST00000599460 Q5VV11 94 aa8.65□□□□□ -1.02
SYMPK-213ENST00000599460 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
SYMPK-213ENST00000599460 SPINK7P58062 85 aa8.61□□□□□ -1.03
SYMPK-213ENST00000599460 KRTAP13-1Q8IUC0 172 aa8.57□□□□□ -1.04
SYMPK-213ENST00000599460 MXRA5Q9NR99 2828 aa8.57□□□□□ -1.04
SYMPK-213ENST00000599460 A0A0D9SG42 100 aa8.57□□□□□ -1.04
SYMPK-213ENST00000599460 PRAC1Q96KF2 57 aa8.54□□□□□ -1.04
SYMPK-213ENST00000599460 PDZD2O15018 2839 aa8.53□□□□□ -1.04
SYMPK-213ENST00000599460 S4R3F8 94 aa8.52□□□□□ -1.05
SYMPK-213ENST00000599460 KRTAP13-2Q52LG2 175 aa8.51□□□□□ -1.05
SYMPK-213ENST00000599460 KRTAP29-1A8MX34 341 aaPredicted RBP8.5□□□□□ -1.05
SYMPK-213ENST00000599460 NBPF19A0A087WUL8 3843 aa8.49□□□□□ -1.05
SYMPK-213ENST00000599460 NOTCH2NLQ7Z3S9 236 aa8.49□□□□□ -1.05
SYMPK-213ENST00000599460 CSAG1Q6PB30 78 aa8.48□□□□□ -1.05
SYMPK-213ENST00000599460 ASB16-AS1Q495Z4 193 aa8.47□□□□□ -1.05
SYMPK-213ENST00000599460 RPS29P62273 56 aaKnown RBP8.46□□□□□ -1.05
SYMPK-213ENST00000599460 A0A1B0GU33 70 aa8.45□□□□□ -1.06
SYMPK-213ENST00000599460 SMG1Q96Q15 3661 aaKnown RBP8.41□□□□□ -1.06
SYMPK-213ENST00000599460 DMAC1Q96GE9 116 aa8.41□□□□□ -1.06
SYMPK-213ENST00000599460 LUZP6Q538Z0 58 aa8.38□□□□□ -1.07
SYMPK-213ENST00000599460 CELSR1Q9NYQ6 3014 aa8.38□□□□□ -1.07
SYMPK-213ENST00000599460 OTOGQ6ZRI0 2925 aa8.34□□□□□ -1.07
SYMPK-213ENST00000599460 DMBT1Q9UGM3 2413 aaPredicted RBP8.34□□□□□ -1.07
SYMPK-213ENST00000599460 CAMK2N1Q7Z7J9 78 aa8.33□□□□□ -1.08
SYMPK-213ENST00000599460 CSMD1Q96PZ7 3565 aa8.28□□□□□ -1.08
SYMPK-213ENST00000599460 SPENQ96T58 3664 aaKnown RBP8.28□□□□□ -1.08
SYMPK-213ENST00000599460 ANK3Q12955 4377 aaKnown RBP8.26□□□□□ -1.09
SYMPK-213ENST00000599460 BSNQ9UPA5 3926 aa8.26□□□□□ -1.09
SYMPK-213ENST00000599460 TENM1Q9UKZ4 2725 aa8.26□□□□□ -1.09
SYMPK-213ENST00000599460 TENM3Q9P273 2699 aa8.26□□□□□ -1.09
SYMPK-213ENST00000599460 R4GN34 69 aa8.24□□□□□ -1.09
SYMPK-213ENST00000599460 A6NN06 94 aa8.24□□□□□ -1.09
SYMPK-213ENST00000599460 KRTAP1-4P0C5Y4 121 aa8.23□□□□□ -1.09
SYMPK-213ENST00000599460 TENM2Q9NT68 2774 aa8.2□□□□□ -1.1
SYMPK-213ENST00000599460 RPL37P61927 97 aaKnown RBP8.2□□□□□ -1.1
SYMPK-213ENST00000599460 ZFHX3Q15911 3703 aa8.18□□□□□ -1.1
SYMPK-213ENST00000599460 SVEP1Q4LDE5 3571 aa8.18□□□□□ -1.1
SYMPK-213ENST00000599460 FLG2Q5D862 2391 aaPredicted RBP8.16□□□□□ -1.1
SYMPK-213ENST00000599460 A0A0A0MQY5 61 aa8.16□□□□□ -1.1
SYMPK-213ENST00000599460 SPATA8Q6RVD6 105 aa8.15□□□□□ -1.11
SYMPK-213ENST00000599460 H1FX-AS1Q4G0G2 97 aa8.14□□□□□ -1.11
SYMPK-213ENST00000599460 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
SYMPK-213ENST00000599460 M0QZ58 72 aa8.12□□□□□ -1.11
SYMPK-213ENST00000599460 ROMO1P60602 79 aa8.12□□□□□ -1.11
SYMPK-213ENST00000599460 CSMD2Q7Z408 3487 aa8.1□□□□□ -1.11
SYMPK-213ENST00000599460 PLAC4Q8WY50 150 aa8.09□□□□□ -1.11
SYMPK-213ENST00000599460 A8MUU9 505 aa8.08□□□□□ -1.12
SYMPK-213ENST00000599460 FBN1P35555 2871 aaKnown RBP8.08□□□□□ -1.12
SYMPK-213ENST00000599460 C20orf166-AS1Q96NR2 134 aa8.07□□□□□ -1.12
SYMPK-213ENST00000599460 VWFP04275 2813 aa8.05□□□□□ -1.12
SYMPK-213ENST00000599460 A0A1B0GVY2 172 aa8.05□□□□□ -1.12
SYMPK-213ENST00000599460 KRTAP16-1A8MUX0 517 aa8.01□□□□□ -1.13
SYMPK-213ENST00000599460 PKD1L1Q8TDX9 2849 aa8□□□□□ -1.13
SYMPK-213ENST00000599460 A8MU10 97 aa7.98□□□□□ -1.13
SYMPK-213ENST00000599460 KRTAP25-1Q3LHN0 102 aa7.98□□□□□ -1.13
SYMPK-213ENST00000599460 XP32Q5T750 250 aa7.98□□□□□ -1.13
SYMPK-213ENST00000599460 TGP01266 2768 aa7.91□□□□□ -1.14
SYMPK-213ENST00000599460 TRRAPQ9Y4A5 3859 aa7.91□□□□□ -1.14
SYMPK-213ENST00000599460 TPRXLQ17RH7 258 aa7.87□□□□□ -1.15
SYMPK-213ENST00000599460 KRTAP10-8P60410 259 aa7.81□□□□□ -1.16
SYMPK-213ENST00000599460 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
SYMPK-213ENST00000599460 NDUFAF8A1L188 74 aa7.79□□□□□ -1.16
SYMPK-213ENST00000599460 CUBNO60494 3623 aa7.78□□□□□ -1.16
SYMPK-213ENST00000599460 VPS13CQ709C8 3753 aa7.69□□□□□ -1.18
SYMPK-213ENST00000599460 HUWE1Q7Z6Z7 4374 aaKnown RBP7.67□□□□□ -1.18
SYMPK-213ENST00000599460 AKAP9Q99996 3911 aa7.62□□□□□ -1.19
SYMPK-213ENST00000599460 ZNF469Q96JG9 3925 aaPredicted RBP7.6□□□□□ -1.19
SYMPK-213ENST00000599460 FBN3Q75N90 2809 aa7.53□□□□□ -1.2
SYMPK-213ENST00000599460 MEGF8Q7Z7M0 2845 aa7.47□□□□□ -1.21
SYMPK-213ENST00000599460 KRTAP10-10P60014 251 aa7.44□□□□□ -1.22
SYMPK-213ENST00000599460 TNP1P09430 55 aa7.43□□□□□ -1.22
SYMPK-213ENST00000599460 PP632Q6XCG6 107 aa7.41□□□□□ -1.22
SYMPK-213ENST00000599460 H0YAA0 97 aa7.41□□□□□ -1.22
SYMPK-213ENST00000599460 P0C880 135 aa7.39□□□□□ -1.23
SYMPK-213ENST00000599460 DNAH9Q9NYC9 4486 aa7.39□□□□□ -1.23
SYMPK-213ENST00000599460 ALMS1Q8TCU4 4167 aa7.37□□□□□ -1.23
SYMPK-213ENST00000599460 PRO2289Q9P1D8 64 aa7.35□□□□□ -1.23
SYMPK-213ENST00000599460 COL7A1Q02388 2944 aa7.33□□□□□ -1.24
SYMPK-213ENST00000599460 MT1HL1P0DM35 61 aa7.31□□□□□ -1.24
SYMPK-213ENST00000599460 SRRM2Q9UQ35 2752 aaKnown RBP7.31□□□□□ -1.24
SYMPK-213ENST00000599460 C10orf95Q9H7T3 257 aa7.3□□□□□ -1.24
SYMPK-213ENST00000599460 KRTAP10-4P60372 401 aaPredicted RBP7.28□□□□□ -1.24
SYMPK-213ENST00000599460 KRTAP3-1Q9BYR8 98 aa7.24□□□□□ -1.25
SYMPK-213ENST00000599460 KRTAP4-5Q9BYR2 181 aa7.24□□□□□ -1.25
SYMPK-213ENST00000599460 PLECQ15149 4684 aaKnown RBP7.13□□□□□ -1.27
SYMPK-213ENST00000599460 DNAH1Q9P2D7 4330 aa7.1□□□□□ -1.27
SYMPK-213ENST00000599460 CSMD3Q7Z407 3707 aa7.09□□□□□ -1.27
SYMPK-213ENST00000599460 KRTAP12-2P59991 146 aa7.05□□□□□ -1.28
SYMPK-213ENST00000599460 DNHD1Q96M86 4753 aa7.05□□□□□ -1.28
SYMPK-213ENST00000599460 DNAH5Q8TE73 4624 aa7.03□□□□□ -1.28
SYMPK-213ENST00000599460 VPS13DQ5THJ4 4388 aa6.99□□□□□ -1.29
SYMPK-213ENST00000599460 ANK2Q01484 3957 aa6.96□□□□□ -1.3
SYMPK-213ENST00000599460 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
SYMPK-213ENST00000599460 STARD9Q9P2P6 4700 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms