RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 KRTAP13-2Q52LG2 175 aa6.28□□□□□ -1.4
SMAD4-214ENST00000592186 FP248Q71RG6 208 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-214ENST00000592186 Q8NBF4 154 aa6.28□□□□□ -1.4
SMAD4-214ENST00000592186 ABCA13Q86UQ4 5058 aa6.28□□□□□ -1.4
SMAD4-214ENST00000592186 CXCL6P80162 114 aa6.27□□□□□ -1.41
SMAD4-214ENST00000592186 MOBPQ13875 183 aa6.27□□□□□ -1.41
SMAD4-214ENST00000592186 PKHD1L1Q86WI1 4243 aa6.27□□□□□ -1.41
SMAD4-214ENST00000592186 IGLV8-61A0A075B6I0 122 aa6.26□□□□□ -1.41
SMAD4-214ENST00000592186 LOC110117498A0A087WWA1 95 aa6.26□□□□□ -1.41
SMAD4-214ENST00000592186 SPAG11AQ6PDA7 123 aa6.26□□□□□ -1.41
SMAD4-214ENST00000592186 MT1HL1P0DM35 61 aa6.25□□□□□ -1.41
SMAD4-214ENST00000592186 PRR15Q8IV56 129 aa6.25□□□□□ -1.41
SMAD4-214ENST00000592186 PCLOQ9Y6V0 5065 aa6.25□□□□□ -1.41
SMAD4-214ENST00000592186 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
SMAD4-214ENST00000592186 RBM3P98179 157 aaKnown RBP6.24□□□□□ -1.41
SMAD4-214ENST00000592186 CD164Q04900 197 aa6.24□□□□□ -1.41
SMAD4-214ENST00000592186 LINC00304Q8N9R0 145 aa6.24□□□□□ -1.41
SMAD4-214ENST00000592186 TRBV7-4A0A0J9YYF1 115 aa6.23□□□□□ -1.41
SMAD4-214ENST00000592186 SPINK1P00995 79 aa6.23□□□□□ -1.41
SMAD4-214ENST00000592186 BRK1Q8WUW1 75 aa6.23□□□□□ -1.41
SMAD4-214ENST00000592186 MYCBP2O75592 4640 aa6.22□□□□□ -1.41
SMAD4-214ENST00000592186 KRTAP4-8Q9BYQ9 185 aa6.21□□□□□ -1.42
SMAD4-214ENST00000592186 RPS29P62273 56 aaKnown RBP6.2□□□□□ -1.42
SMAD4-214ENST00000592186 IGFL1Q6UW32 110 aa6.2□□□□□ -1.42
SMAD4-214ENST00000592186 Q6ZQT0 140 aa6.2□□□□□ -1.42
SMAD4-214ENST00000592186 LRP1Q07954 4544 aaKnown RBP6.19□□□□□ -1.42
SMAD4-214ENST00000592186 PMAIP1Q13794 54 aa6.17□□□□□ -1.42
SMAD4-214ENST00000592186 FAT3Q8TDW7 4589 aa6.17□□□□□ -1.42
SMAD4-214ENST00000592186 NREPQ16612 68 aa6.16□□□□□ -1.42
SMAD4-214ENST00000592186 TMEM254Q8TBM7 123 aa6.16□□□□□ -1.42
SMAD4-214ENST00000592186 LIMD2Q9BT23 127 aa6.16□□□□□ -1.42
SMAD4-214ENST00000592186 A0A1B0GW54 56 aa6.15□□□□□ -1.43
SMAD4-214ENST00000592186 Q6ZVQ6 151 aa6.15□□□□□ -1.43
SMAD4-214ENST00000592186 A0A0G2JQZ4 141 aa6.14□□□□□ -1.43
SMAD4-214ENST00000592186 SNURFQ9Y675 71 aa6.14□□□□□ -1.43
SMAD4-214ENST00000592186 A0A0U1RQV1 116 aa6.13□□□□□ -1.43
SMAD4-214ENST00000592186 Q1T7F1 81 aa6.13□□□□□ -1.43
SMAD4-214ENST00000592186 A0A1W2PNM2 257 aa6.12□□□□□ -1.43
SMAD4-214ENST00000592186 DMBT1Q9UGM3 2413 aaPredicted RBP6.11□□□□□ -1.43
SMAD4-214ENST00000592186 ASB16-AS1Q495Z4 193 aa6.1□□□□□ -1.43
SMAD4-214ENST00000592186 TNXBP22105 4242 aa6.09□□□□□ -1.43
SMAD4-214ENST00000592186 A0A087WSZ3 146 aa6.08□□□□□ -1.44
SMAD4-214ENST00000592186 BPY2O14599 106 aa6.08□□□□□ -1.44
SMAD4-214ENST00000592186 OCR1Q9BZK8 76 aa6.08□□□□□ -1.44
SMAD4-214ENST00000592186 hDV103S1A0JD37 113 aa6.07□□□□□ -1.44
SMAD4-214ENST00000592186 H3BS24 57 aa6.06□□□□□ -1.44
SMAD4-214ENST00000592186 KRTAP9-2Q9BYQ4 174 aa6.06□□□□□ -1.44
SMAD4-214ENST00000592186 CYP4F30PQ9H0H9 118 aa6.04□□□□□ -1.44
SMAD4-214ENST00000592186 PRR4Q16378 134 aa6.03□□□□□ -1.44
SMAD4-214ENST00000592186 MPLKIPQ8TAP9 179 aa6.03□□□□□ -1.44
SMAD4-214ENST00000592186 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
SMAD4-214ENST00000592186 RETNLBQ9BQ08 111 aa6.02□□□□□ -1.45
SMAD4-214ENST00000592186 IGKV4-1P06312 121 aa6.01□□□□□ -1.45
SMAD4-214ENST00000592186 KRTAP4-12Q9BQ66 201 aa6.01□□□□□ -1.45
SMAD4-214ENST00000592186 IGLV7-46A0A075B6I9 117 aa6□□□□□ -1.45
SMAD4-214ENST00000592186 KRTAP9-6A0A140TA67 174 aa6□□□□□ -1.45
SMAD4-214ENST00000592186 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
SMAD4-214ENST00000592186 NDUFB1O75438 58 aa5.99□□□□□ -1.45
SMAD4-214ENST00000592186 LINC00472Q9H8W2 130 aa5.99□□□□□ -1.45
SMAD4-214ENST00000592186 NDUFS5O43920 106 aa5.99□□□□□ -1.45
SMAD4-214ENST00000592186 HERC1Q15751 4861 aa5.98□□□□□ -1.45
SMAD4-214ENST00000592186 ZCCHC13Q8WW36 166 aaKnown RBP5.98□□□□□ -1.45
SMAD4-214ENST00000592186 Q96NJ1 140 aa5.97□□□□□ -1.45
SMAD4-214ENST00000592186 TRAV22A0A0B4J277 110 aa5.95□□□□□ -1.46
SMAD4-214ENST00000592186 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
SMAD4-214ENST00000592186 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
SMAD4-214ENST00000592186 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
SMAD4-214ENST00000592186 C1orf64Q8NEQ6 169 aa5.94□□□□□ -1.46
SMAD4-214ENST00000592186 DEFB116Q30KQ4 102 aa5.93□□□□□ -1.46
SMAD4-214ENST00000592186 KRTAP13-3Q3SY46 172 aa5.92□□□□□ -1.46
SMAD4-214ENST00000592186 SPANXA2-OT1Q8N9U9 137 aa5.92□□□□□ -1.46
SMAD4-214ENST00000592186 A8MWP4 228 aa5.91□□□□□ -1.46
SMAD4-214ENST00000592186 H3BPC8 53 aa5.91□□□□□ -1.46
SMAD4-214ENST00000592186 ATP11AUNQ6ZP68 121 aa5.91□□□□□ -1.46
SMAD4-214ENST00000592186 A0A1B0GVX0 72 aa5.89□□□□□ -1.47
SMAD4-214ENST00000592186 C8orf87E5RJ46 101 aa5.88□□□□□ -1.47
SMAD4-214ENST00000592186 LINC00313P59037 77 aa5.88□□□□□ -1.47
SMAD4-214ENST00000592186 Q5VV11 94 aa5.88□□□□□ -1.47
SMAD4-214ENST00000592186 IGHV6-1A0A0B4J1U7 121 aa5.87□□□□□ -1.47
SMAD4-214ENST00000592186 Q75L30 129 aa5.87□□□□□ -1.47
SMAD4-214ENST00000592186 RBM12B-AS1Q9P1G2 102 aa5.87□□□□□ -1.47
SMAD4-214ENST00000592186 HMCN2Q8NDA2 5059 aa5.86□□□□□ -1.47
SMAD4-214ENST00000592186 C9orf92A6NGG3 77 aa5.86□□□□□ -1.47
SMAD4-214ENST00000592186 DSCR10P59022 87 aa5.86□□□□□ -1.47
SMAD4-214ENST00000592186 LOC101927531A0A1B0GV80 90 aa5.84□□□□□ -1.47
SMAD4-214ENST00000592186 HCG22E2RYF7 251 aa5.84□□□□□ -1.47
SMAD4-214ENST00000592186 PSPHP1O15172 72 aa5.84□□□□□ -1.47
SMAD4-214ENST00000592186 MP68P56378 58 aa5.84□□□□□ -1.47
SMAD4-214ENST00000592186 A8MUN3 132 aa5.83□□□□□ -1.48
SMAD4-214ENST00000592186 C7orf65Q6ZTY9 151 aa5.83□□□□□ -1.48
SMAD4-214ENST00000592186 A6NN06 94 aa5.82□□□□□ -1.48
SMAD4-214ENST00000592186 Q8N9L7 120 aa5.82□□□□□ -1.48
SMAD4-214ENST00000592186 K7EQZ3 153 aa5.81□□□□□ -1.48
SMAD4-214ENST00000592186 LINC00208Q96KT6 92 aa5.81□□□□□ -1.48
SMAD4-214ENST00000592186 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
SMAD4-214ENST00000592186 CDC42SE1Q9NRR8 79 aa5.81□□□□□ -1.48
SMAD4-214ENST00000592186 CHKB-CPT1BH3BT56 60 aa5.8□□□□□ -1.48
SMAD4-214ENST00000592186 Q8N9P0 234 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-214ENST00000592186 NOTCH2NLQ7Z3S9 236 aa5.79□□□□□ -1.48
SMAD4-214ENST00000592186 SEC61BP60468 96 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms