RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 LINC00208Q96KT6 92 aa9.22□□□□□ -0.93
MBD1-227ENST00000592060 LRP1BQ9NZR2 4599 aa9.22□□□□□ -0.93
MBD1-227ENST00000592060 KRTAP13-2Q52LG2 175 aa9.21□□□□□ -0.93
MBD1-227ENST00000592060 CDK2AP2O75956 126 aa9.21□□□□□ -0.94
MBD1-227ENST00000592060 FAM229BQ4G0N7 80 aa9.2□□□□□ -0.94
MBD1-227ENST00000592060 KRTAP1-4P0C5Y4 121 aa9.17□□□□□ -0.94
MBD1-227ENST00000592060 NOTCH2NLQ7Z3S9 236 aa9.17□□□□□ -0.94
MBD1-227ENST00000592060 TP53AIP1Q9HCN2 124 aa9.17□□□□□ -0.94
MBD1-227ENST00000592060 SMIM26A0A096LP01 95 aa9.16□□□□□ -0.94
MBD1-227ENST00000592060 SPINK6Q6UWN8 80 aa9.15□□□□□ -0.94
MBD1-227ENST00000592060 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.94
MBD1-227ENST00000592060 CYP4F30PQ9H0H9 118 aa9.15□□□□□ -0.95
MBD1-227ENST00000592060 FP248Q71RG6 208 aaPredicted RBP9.14□□□□□ -0.95
MBD1-227ENST00000592060 C1orf64Q8NEQ6 169 aa9.14□□□□□ -0.95
MBD1-227ENST00000592060 C4orf26Q17RF5 130 aa9.12□□□□□ -0.95
MBD1-227ENST00000592060 VPS13BQ7Z7G8 4022 aa9.11□□□□□ -0.95
MBD1-227ENST00000592060 LINC00336Q6ZUF6 198 aa9.1□□□□□ -0.95
MBD1-227ENST00000592060 SPANXA2-OT1Q8N9U9 137 aa9.1□□□□□ -0.95
MBD1-227ENST00000592060 NDUFS5O43920 106 aa9.08□□□□□ -0.96
MBD1-227ENST00000592060 PRR4Q16378 134 aa9.08□□□□□ -0.96
MBD1-227ENST00000592060 C8orf87E5RJ46 101 aa9.07□□□□□ -0.96
MBD1-227ENST00000592060 C1orf195Q5TG92 126 aa9.06□□□□□ -0.96
MBD1-227ENST00000592060 A0A1B0GVY2 172 aa9.06□□□□□ -0.96
MBD1-227ENST00000592060 PKHD1P08F94 4074 aa9.05□□□□□ -0.96
MBD1-227ENST00000592060 PLA2G1BP04054 148 aaKnown RBP9.03□□□□□ -0.96
MBD1-227ENST00000592060 KRTAP13-3Q3SY46 172 aa9.02□□□□□ -0.97
MBD1-227ENST00000592060 LIMD2Q9BT23 127 aa9.01□□□□□ -0.97
MBD1-227ENST00000592060 DYNC1H1Q14204 4646 aaKnown RBP9.01□□□□□ -0.97
MBD1-227ENST00000592060 SVIPQ8NHG7 77 aa8.99□□□□□ -0.97
MBD1-227ENST00000592060 TYMSOSQ8TAI1 123 aa8.99□□□□□ -0.97
MBD1-227ENST00000592060 IGLV7-46A0A075B6I9 117 aa8.98□□□□□ -0.97
MBD1-227ENST00000592060 LINC00313P59037 77 aa8.98□□□□□ -0.97
MBD1-227ENST00000592060 PCOTHQ58A44 107 aa8.98□□□□□ -0.97
MBD1-227ENST00000592060 Q5W150 140 aa8.98□□□□□ -0.97
MBD1-227ENST00000592060 HERC2O95714 4834 aa8.96□□□□□ -0.98
MBD1-227ENST00000592060 MPLKIPQ8TAP9 179 aa8.95□□□□□ -0.98
MBD1-227ENST00000592060 PCLOQ9Y6V0 5065 aa8.95□□□□□ -0.98
MBD1-227ENST00000592060 Q8N9P0 234 aaPredicted RBP8.95□□□□□ -0.98
MBD1-227ENST00000592060 KRTAP16-1A8MUX0 517 aa8.94□□□□□ -0.98
MBD1-227ENST00000592060 SPINK1P00995 79 aa8.94□□□□□ -0.98
MBD1-227ENST00000592060 LOC101927531A0A1B0GV80 90 aa8.93□□□□□ -0.98
MBD1-227ENST00000592060 SMR3BP02814 79 aaPredicted RBP8.93□□□□□ -0.98
MBD1-227ENST00000592060 KRTAP10-4P60372 401 aaPredicted RBP8.93□□□□□ -0.98
MBD1-227ENST00000592060 C4orf48Q5BLP8 95 aa8.93□□□□□ -0.98
MBD1-227ENST00000592060 APOBP04114 4563 aaKnown RBP8.92□□□□□ -0.98
MBD1-227ENST00000592060 PRR26Q8N8Z3 221 aa8.92□□□□□ -0.98
MBD1-227ENST00000592060 Q1T7F1 81 aa8.9□□□□□ -0.98
MBD1-227ENST00000592060 RYR1P21817 5038 aa8.89□□□□□ -0.99
MBD1-227ENST00000592060 RPS29P62273 56 aaKnown RBP8.89□□□□□ -0.99
MBD1-227ENST00000592060 LINC00304Q8N9R0 145 aa8.89□□□□□ -0.99
MBD1-227ENST00000592060 FAM229AH3BQW9 127 aa8.87□□□□□ -0.99
MBD1-227ENST00000592060 COA5Q86WW8 74 aa8.86□□□□□ -0.99
MBD1-227ENST00000592060 SPAG11AQ6PDA7 123 aa8.84□□□□□ -0.99
MBD1-227ENST00000592060 PKHD1L1Q86WI1 4243 aa8.84□□□□□ -0.99
MBD1-227ENST00000592060 RETNLBQ9BQ08 111 aa8.81□□□□□ -1
MBD1-227ENST00000592060 FAT1Q14517 4588 aa8.8□□□□□ -1
MBD1-227ENST00000592060 IGKV2-30P06310 120 aa8.79□□□□□ -1
MBD1-227ENST00000592060 KIAA1109Q2LD37 5005 aa8.79□□□□□ -1
MBD1-227ENST00000592060 HRES1P13985 223 aa8.78□□□□□ -1
MBD1-227ENST00000592060 V9GYY9 64 aa8.78□□□□□ -1
MBD1-227ENST00000592060 PSPHP1O15172 72 aa8.73□□□□□ -1.01
MBD1-227ENST00000592060 A8MUN3 132 aa8.7□□□□□ -1.02
MBD1-227ENST00000592060 DMAC1Q96GE9 116 aa8.7□□□□□ -1.02
MBD1-227ENST00000592060 PRO0628Q9UI54 55 aa8.7□□□□□ -1.02
MBD1-227ENST00000592060 Q5VV11 94 aa8.68□□□□□ -1.02
MBD1-227ENST00000592060 BRK1Q8WUW1 75 aa8.68□□□□□ -1.02
MBD1-227ENST00000592060 IGKV2D-30A0A075B6S6 120 aa8.66□□□□□ -1.02
MBD1-227ENST00000592060 ACYP2P14621 99 aa8.66□□□□□ -1.02
MBD1-227ENST00000592060 PRR15LQ9BU68 103 aa8.64□□□□□ -1.03
MBD1-227ENST00000592060 LINC01558Q9Y6Z2 57 aa8.62□□□□□ -1.03
MBD1-227ENST00000592060 ABCA13Q86UQ4 5058 aa8.61□□□□□ -1.03
MBD1-227ENST00000592060 A8MUU9 505 aa8.61□□□□□ -1.03
MBD1-227ENST00000592060 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
MBD1-227ENST00000592060 C9orf92A6NGG3 77 aa8.61□□□□□ -1.03
MBD1-227ENST00000592060 HSPG2P98160 4391 aa8.59□□□□□ -1.03
MBD1-227ENST00000592060 Q75L30 129 aa8.59□□□□□ -1.03
MBD1-227ENST00000592060 Q5VSD8 79 aa8.58□□□□□ -1.04
MBD1-227ENST00000592060 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
MBD1-227ENST00000592060 FLG2Q5D862 2391 aaPredicted RBP8.56□□□□□ -1.04
MBD1-227ENST00000592060 KRTAP10-8P60410 259 aa8.55□□□□□ -1.04
MBD1-227ENST00000592060 Q8N1X5 172 aa8.55□□□□□ -1.04
MBD1-227ENST00000592060 TNXBP22105 4242 aa8.55□□□□□ -1.04
MBD1-227ENST00000592060 CHKB-CPT1BH3BT56 60 aa8.53□□□□□ -1.04
MBD1-227ENST00000592060 KRTAP4-5Q9BYR2 181 aa8.48□□□□□ -1.05
MBD1-227ENST00000592060 FAT3Q8TDW7 4589 aa8.47□□□□□ -1.05
MBD1-227ENST00000592060 LRP1Q07954 4544 aaKnown RBP8.47□□□□□ -1.05
MBD1-227ENST00000592060 A8MU10 97 aa8.46□□□□□ -1.06
MBD1-227ENST00000592060 A6NED7 52 aa8.43□□□□□ -1.06
MBD1-227ENST00000592060 LCA10Q71F78 164 aa8.41□□□□□ -1.06
MBD1-227ENST00000592060 HERC1Q15751 4861 aa8.39□□□□□ -1.07
MBD1-227ENST00000592060 SPINK7P58062 85 aa8.39□□□□□ -1.07
MBD1-227ENST00000592060 CDC42SE1Q9NRR8 79 aa8.36□□□□□ -1.07
MBD1-227ENST00000592060 MT1HL1P0DM35 61 aa8.35□□□□□ -1.07
MBD1-227ENST00000592060 KRTAP3-1Q9BYR8 98 aa8.34□□□□□ -1.07
MBD1-227ENST00000592060 A0A1B0GU69 56 aa8.33□□□□□ -1.08
MBD1-227ENST00000592060 RPL37P61927 97 aaKnown RBP8.3□□□□□ -1.08
MBD1-227ENST00000592060 XP32Q5T750 250 aa8.28□□□□□ -1.08
MBD1-227ENST00000592060 ATP11AUNQ6ZP68 121 aa8.26□□□□□ -1.09
MBD1-227ENST00000592060 COX6B2Q6YFQ2 88 aa8.24□□□□□ -1.09
MBD1-227ENST00000592060 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms