RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 A0A087WVE0 104 aa17.49■□□□□ 0.39
CAPNS1-206ENST00000588815 ABCA13Q86UQ4 5058 aa17.43■□□□□ 0.38
CAPNS1-206ENST00000588815 IGHV6-1A0A0B4J1U7 121 aa17.43■□□□□ 0.38
CAPNS1-206ENST00000588815 J3QL48 77 aa17.42■□□□□ 0.38
CAPNS1-206ENST00000588815 C8orf87E5RJ46 101 aa17.41■□□□□ 0.38
CAPNS1-206ENST00000588815 SCGB1A1P11684 91 aa17.41■□□□□ 0.38
CAPNS1-206ENST00000588815 HCG22E2RYF7 251 aa17.4■□□□□ 0.38
CAPNS1-206ENST00000588815 FP248Q71RG6 208 aaPredicted RBP17.4■□□□□ 0.38
CAPNS1-206ENST00000588815 C8orf17Q9NRJ1 99 aa17.38■□□□□ 0.37
CAPNS1-206ENST00000588815 RETNLBQ9BQ08 111 aa17.37■□□□□ 0.37
CAPNS1-206ENST00000588815 FAM236AA0A1B0GUQ0 79 aa17.37■□□□□ 0.37
CAPNS1-206ENST00000588815 FAM236BA0A1B0GV22 79 aa17.37■□□□□ 0.37
CAPNS1-206ENST00000588815 MMP24-AS1A0A0U1RRL7 71 aa17.35■□□□□ 0.37
CAPNS1-206ENST00000588815 LINC00313P59037 77 aa17.31■□□□□ 0.36
CAPNS1-206ENST00000588815 CASC2Q6XLA1 102 aa17.31■□□□□ 0.36
CAPNS1-206ENST00000588815 hDV103S1A0JD37 113 aa17.29■□□□□ 0.36
CAPNS1-206ENST00000588815 WFDC13Q8IUB5 93 aa17.27■□□□□ 0.36
CAPNS1-206ENST00000588815 NOTCH2NLQ7Z3S9 236 aa17.24■□□□□ 0.35
CAPNS1-206ENST00000588815 TMEM254Q8TBM7 123 aa17.24■□□□□ 0.35
CAPNS1-206ENST00000588815 ATOX1O00244 68 aa17.22■□□□□ 0.35
CAPNS1-206ENST00000588815 MRPL34Q9BQ48 92 aaKnown RBP17.18■□□□□ 0.34
CAPNS1-206ENST00000588815 IGLV7-46A0A075B6I9 117 aa17.17■□□□□ 0.34
CAPNS1-206ENST00000588815 SMIM20Q8N5G0 67 aa17.15■□□□□ 0.34
CAPNS1-206ENST00000588815 KRTAP16-1A8MUX0 517 aa17.12■□□□□ 0.33
CAPNS1-206ENST00000588815 PRR4Q16378 134 aa17.1■□□□□ 0.33
CAPNS1-206ENST00000588815 Q8N9P0 234 aaPredicted RBP17.05■□□□□ 0.32
CAPNS1-206ENST00000588815 C9orf92A6NGG3 77 aa17.05■□□□□ 0.32
CAPNS1-206ENST00000588815 OCR1Q9BZK8 76 aa17.04■□□□□ 0.32
CAPNS1-206ENST00000588815 TP53AIP1Q9HCN2 124 aa17.03■□□□□ 0.32
CAPNS1-206ENST00000588815 KRTAP13-3Q3SY46 172 aa17.01■□□□□ 0.31
CAPNS1-206ENST00000588815 TRAV7A0A075B6U4 112 aa17■□□□□ 0.31
CAPNS1-206ENST00000588815 ANAPC13Q9BS18 74 aa16.99■□□□□ 0.31
CAPNS1-206ENST00000588815 NDUFS5O43920 106 aa16.99■□□□□ 0.31
CAPNS1-206ENST00000588815 TPRXLQ17RH7 258 aa16.98■□□□□ 0.31
CAPNS1-206ENST00000588815 SERP2Q8N6R1 65 aa16.97■□□□□ 0.31
CAPNS1-206ENST00000588815 PCLOQ9Y6V0 5065 aa16.95■□□□□ 0.3
CAPNS1-206ENST00000588815 UQCRQO14949 82 aa16.94■□□□□ 0.3
CAPNS1-206ENST00000588815 C20orf166-AS1Q96NR2 134 aa16.93■□□□□ 0.3
CAPNS1-206ENST00000588815 A8MUU9 505 aa16.91■□□□□ 0.3
CAPNS1-206ENST00000588815 COX7CP15954 63 aa16.85■□□□□ 0.29
CAPNS1-206ENST00000588815 Q75L30 129 aa16.85■□□□□ 0.29
CAPNS1-206ENST00000588815 C5orf47Q569G3 176 aa16.83■□□□□ 0.28
CAPNS1-206ENST00000588815 XP32Q5T750 250 aa16.81■□□□□ 0.28
CAPNS1-206ENST00000588815 TRAV22A0A0B4J277 110 aa16.79■□□□□ 0.28
CAPNS1-206ENST00000588815 MP68P56378 58 aa16.73■□□□□ 0.27
CAPNS1-206ENST00000588815 PCP4P48539 62 aa16.72■□□□□ 0.27
CAPNS1-206ENST00000588815 RPL37P61927 97 aaKnown RBP16.72■□□□□ 0.27
CAPNS1-206ENST00000588815 H0Y9P7 68 aa16.71■□□□□ 0.27
CAPNS1-206ENST00000588815 H3BPC8 53 aa16.7■□□□□ 0.26
CAPNS1-206ENST00000588815 ZCCHC13Q8WW36 166 aaKnown RBP16.7■□□□□ 0.26
CAPNS1-206ENST00000588815 Q5W150 140 aa16.68■□□□□ 0.26
CAPNS1-206ENST00000588815 ATP11AUNQ6ZP68 121 aa16.61■□□□□ 0.25
CAPNS1-206ENST00000588815 C20orf197Q8N268 126 aa16.61■□□□□ 0.25
CAPNS1-206ENST00000588815 A0A0U1RQV1 116 aa16.57■□□□□ 0.24
CAPNS1-206ENST00000588815 KLKP1Q107X0 134 aa16.57■□□□□ 0.24
CAPNS1-206ENST00000588815 LINC00208Q96KT6 92 aa16.57■□□□□ 0.24
CAPNS1-206ENST00000588815 CCDC179H3BU77 68 aa16.56■□□□□ 0.24
CAPNS1-206ENST00000588815 C1orf64Q8NEQ6 169 aa16.54■□□□□ 0.24
CAPNS1-206ENST00000588815 LOC101927531A0A1B0GV80 90 aa16.54■□□□□ 0.24
CAPNS1-206ENST00000588815 LPAP08519 4548 aa16.48■□□□□ 0.23
CAPNS1-206ENST00000588815 SNURFQ9Y675 71 aa16.48■□□□□ 0.23
CAPNS1-206ENST00000588815 HERC1Q15751 4861 aa16.45■□□□□ 0.22
CAPNS1-206ENST00000588815 IGKV2-30P06310 120 aa16.45■□□□□ 0.22
CAPNS1-206ENST00000588815 NDUFC1O43677 76 aa16.41■□□□□ 0.22
CAPNS1-206ENST00000588815 SEC61BP60468 96 aaKnown RBP16.41■□□□□ 0.22
CAPNS1-206ENST00000588815 C7orf65Q6ZTY9 151 aa16.39■□□□□ 0.21
CAPNS1-206ENST00000588815 CYP4F30PQ9H0H9 118 aa16.39■□□□□ 0.21
CAPNS1-206ENST00000588815 LRP2P98164 4655 aa16.38■□□□□ 0.21
CAPNS1-206ENST00000588815 PCOTHQ58A44 107 aa16.36■□□□□ 0.21
CAPNS1-206ENST00000588815 IGKV2D-30A0A075B6S6 120 aa16.35■□□□□ 0.21
CAPNS1-206ENST00000588815 CYSTM1Q9H1C7 97 aa16.29■□□□□ 0.2
CAPNS1-206ENST00000588815 HMCN2Q8NDA2 5059 aa16.28■□□□□ 0.2
CAPNS1-206ENST00000588815 SPINK7P58062 85 aa16.28■□□□□ 0.2
CAPNS1-206ENST00000588815 H7BZZ5 65 aa16.25■□□□□ 0.19
CAPNS1-206ENST00000588815 SPANXA2-OT1Q8N9U9 137 aa16.12■□□□□ 0.17
CAPNS1-206ENST00000588815 HRES1P13985 223 aa16.09■□□□□ 0.17
CAPNS1-206ENST00000588815 TMEM258P61165 79 aa16.09■□□□□ 0.17
CAPNS1-206ENST00000588815 MUC17Q685J3 4493 aa16.07■□□□□ 0.16
CAPNS1-206ENST00000588815 ATP5EP56381 51 aaPredicted RBP16■□□□□ 0.15
CAPNS1-206ENST00000588815 FAM236DA0A1B0GTK5 79 aa15.94■□□□□ 0.14
CAPNS1-206ENST00000588815 FAM236CP0DP71 79 aa15.94■□□□□ 0.14
CAPNS1-206ENST00000588815 C4orf26Q17RF5 130 aa15.93■□□□□ 0.14
CAPNS1-206ENST00000588815 KRTAP4-1Q9BYQ7 146 aa15.89■□□□□ 0.13
CAPNS1-206ENST00000588815 COX6B2Q6YFQ2 88 aa15.86■□□□□ 0.13
CAPNS1-206ENST00000588815 MPLKIPQ8TAP9 179 aa15.86■□□□□ 0.13
CAPNS1-206ENST00000588815 A8MUN3 132 aa15.85■□□□□ 0.13
CAPNS1-206ENST00000588815 DMAC1Q96GE9 116 aa15.84■□□□□ 0.13
CAPNS1-206ENST00000588815 RBM12B-AS1Q9P1G2 102 aa15.84■□□□□ 0.13
CAPNS1-206ENST00000588815 ACYP2P14621 99 aa15.75■□□□□ 0.11
CAPNS1-206ENST00000588815 KRTAP3-1Q9BYR8 98 aa15.7■□□□□ 0.1
CAPNS1-206ENST00000588815 SERP1Q9Y6X1 66 aa15.58■□□□□ 0.08
CAPNS1-206ENST00000588815 H1FX-AS1Q4G0G2 97 aa15.57■□□□□ 0.08
CAPNS1-206ENST00000588815 COA5Q86WW8 74 aa15.54■□□□□ 0.08
CAPNS1-206ENST00000588815 UBR4Q5T4S7 5183 aa15.48■□□□□ 0.07
CAPNS1-206ENST00000588815 KRTAP19-2Q3LHN2 52 aa15.47■□□□□ 0.07
CAPNS1-206ENST00000588815 CHKB-CPT1BH3BT56 60 aa15.45■□□□□ 0.06
CAPNS1-206ENST00000588815 RPS28P62857 69 aaKnown RBP15.45■□□□□ 0.06
CAPNS1-206ENST00000588815 MUC2Q02817 5179 aa15.41■□□□□ 0.06
CAPNS1-206ENST00000588815 S4R3F8 94 aa15.37■□□□□ 0.05
CAPNS1-206ENST00000588815 RNF213Q63HN8 5207 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms