RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 CSMD1Q96PZ7 3565 aa3□□□□□ -1.93
SMAD4-203ENST00000585448 SPEGQ15772 3267 aa2.99□□□□□ -1.93
SMAD4-203ENST00000585448 ASH1LQ9NR48 2969 aaKnown RBP2.98□□□□□ -1.93
SMAD4-203ENST00000585448 OTOGQ6ZRI0 2925 aa2.98□□□□□ -1.93
SMAD4-203ENST00000585448 BOD1L1Q8NFC6 3051 aa2.98□□□□□ -1.93
SMAD4-203ENST00000585448 HIVEP2P31629 2446 aa2.98□□□□□ -1.93
SMAD4-203ENST00000585448 CDH23Q9H251 3354 aa2.98□□□□□ -1.93
SMAD4-203ENST00000585448 CELSR2Q9HCU4 2923 aa2.97□□□□□ -1.93
SMAD4-203ENST00000585448 M0QZ58 72 aa2.97□□□□□ -1.93
SMAD4-203ENST00000585448 RIF1Q5UIP0 2472 aaKnown RBP2.97□□□□□ -1.93
SMAD4-203ENST00000585448 PRRC2CQ9Y520 2896 aaKnown RBP2.96□□□□□ -1.94
SMAD4-203ENST00000585448 REV3LO60673 3130 aa2.96□□□□□ -1.94
SMAD4-203ENST00000585448 TLN1Q9Y490 2541 aaKnown RBP2.96□□□□□ -1.94
SMAD4-203ENST00000585448 FN1P02751 2386 aaKnown RBP2.96□□□□□ -1.94
SMAD4-203ENST00000585448 F8P00451 2351 aa2.95□□□□□ -1.94
SMAD4-203ENST00000585448 RPS29P62273 56 aaKnown RBP2.95□□□□□ -1.94
SMAD4-203ENST00000585448 TLN2Q9Y4G6 2542 aa2.94□□□□□ -1.94
SMAD4-203ENST00000585448 HRNRQ86YZ3 2850 aaPredicted RBP2.94□□□□□ -1.94
SMAD4-203ENST00000585448 HIVEP3Q5T1R4 2406 aa2.93□□□□□ -1.94
SMAD4-203ENST00000585448 SPENQ96T58 3664 aaKnown RBP2.91□□□□□ -1.94
SMAD4-203ENST00000585448 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
SMAD4-203ENST00000585448 KRTAP13-2Q52LG2 175 aa2.91□□□□□ -1.94
SMAD4-203ENST00000585448 LCE3AQ5TA76 89 aa2.91□□□□□ -1.94
SMAD4-203ENST00000585448 COL12A1Q99715 3063 aa2.91□□□□□ -1.94
SMAD4-203ENST00000585448 ZFHX2Q9C0A1 2572 aaPredicted RBP2.91□□□□□ -1.94
SMAD4-203ENST00000585448 SMG1Q96Q15 3661 aaKnown RBP2.9□□□□□ -1.94
SMAD4-203ENST00000585448 PTPN13Q12923 2485 aa2.9□□□□□ -1.95
SMAD4-203ENST00000585448 DCHS2Q6V1P9 2916 aa2.9□□□□□ -1.95
SMAD4-203ENST00000585448 SETXQ7Z333 2677 aaKnown RBP2.89□□□□□ -1.95
SMAD4-203ENST00000585448 NAV2Q8IVL1 2488 aa2.89□□□□□ -1.95
SMAD4-203ENST00000585448 JMJD1CQ15652 2540 aa2.89□□□□□ -1.95
SMAD4-203ENST00000585448 OTOGLQ3ZCN5 2332 aa2.88□□□□□ -1.95
SMAD4-203ENST00000585448 SONP18583 2426 aaKnown RBP2.88□□□□□ -1.95
SMAD4-203ENST00000585448 CELSR3Q9NYQ7 3312 aa2.88□□□□□ -1.95
SMAD4-203ENST00000585448 APCP25054 2843 aa2.88□□□□□ -1.95
SMAD4-203ENST00000585448 DMXL1Q9Y485 3027 aa2.87□□□□□ -1.95
SMAD4-203ENST00000585448 AKAP9Q99996 3911 aa2.87□□□□□ -1.95
SMAD4-203ENST00000585448 LRBAP50851 2863 aa2.86□□□□□ -1.95
SMAD4-203ENST00000585448 KRTAP10-8P60410 259 aa2.86□□□□□ -1.95
SMAD4-203ENST00000585448 CELSR1Q9NYQ6 3014 aa2.85□□□□□ -1.95
SMAD4-203ENST00000585448 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
SMAD4-203ENST00000585448 ZFYVE26Q68DK2 2539 aa2.85□□□□□ -1.95
SMAD4-203ENST00000585448 NF1P21359 2839 aa2.85□□□□□ -1.95
SMAD4-203ENST00000585448 ADGRG4Q8IZF6 3080 aa2.84□□□□□ -1.95
SMAD4-203ENST00000585448 TEX15Q9BXT5 2789 aa2.84□□□□□ -1.95
SMAD4-203ENST00000585448 USP9XQ93008 2570 aaPredicted RBP2.83□□□□□ -1.96
SMAD4-203ENST00000585448 MUC6Q6W4X9 2439 aa2.82□□□□□ -1.96
SMAD4-203ENST00000585448 ATMQ13315 3056 aa2.82□□□□□ -1.96
SMAD4-203ENST00000585448 NOTCH2Q04721 2471 aa2.82□□□□□ -1.96
SMAD4-203ENST00000585448 CCDC168Q8NDH2 2452 aa2.82□□□□□ -1.96
SMAD4-203ENST00000585448 ZNF462Q96JM2 2506 aa2.82□□□□□ -1.96
SMAD4-203ENST00000585448 LOC400499M0QZD8 3231 aa2.81□□□□□ -1.96
SMAD4-203ENST00000585448 UBR5O95071 2799 aaPredicted RBP2.81□□□□□ -1.96
SMAD4-203ENST00000585448 DOPEY1Q5JWR5 2465 aa2.8□□□□□ -1.96
SMAD4-203ENST00000585448 UTP20O75691 2785 aaKnown RBP2.79□□□□□ -1.96
SMAD4-203ENST00000585448 Q5VSD8 79 aa2.79□□□□□ -1.96
SMAD4-203ENST00000585448 ANKRD11Q6UB99 2663 aaPredicted RBP2.79□□□□□ -1.96
SMAD4-203ENST00000585448 MTORP42345 2549 aa2.79□□□□□ -1.96
SMAD4-203ENST00000585448 MYO9AB2RTY4 2548 aa2.78□□□□□ -1.96
SMAD4-203ENST00000585448 MYO15AQ9UKN7 3530 aa2.78□□□□□ -1.96
SMAD4-203ENST00000585448 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
SMAD4-203ENST00000585448 GCN1Q92616 2671 aaKnown RBP2.77□□□□□ -1.97
SMAD4-203ENST00000585448 CEP295Q9C0D2 2601 aa2.77□□□□□ -1.97
SMAD4-203ENST00000585448 DNAH1Q9P2D7 4330 aa2.77□□□□□ -1.97
SMAD4-203ENST00000585448 VPS13DQ5THJ4 4388 aa2.77□□□□□ -1.97
SMAD4-203ENST00000585448 LAMA5O15230 3695 aa2.76□□□□□ -1.97
SMAD4-203ENST00000585448 NBPF19A0A087WUL8 3843 aa2.76□□□□□ -1.97
SMAD4-203ENST00000585448 CRYBG3Q68DQ2 2970 aa2.76□□□□□ -1.97
SMAD4-203ENST00000585448 COL6A5A8TX70 2615 aa2.75□□□□□ -1.97
SMAD4-203ENST00000585448 UNC79Q9P2D8 2635 aa2.75□□□□□ -1.97
SMAD4-203ENST00000585448 NBEAL2Q6ZNJ1 2754 aa2.75□□□□□ -1.97
SMAD4-203ENST00000585448 C9orf92A6NGG3 77 aa2.75□□□□□ -1.97
SMAD4-203ENST00000585448 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
SMAD4-203ENST00000585448 CENPEQ02224 2701 aa2.74□□□□□ -1.97
SMAD4-203ENST00000585448 FAM208BQ5VWN6 2430 aa2.73□□□□□ -1.97
SMAD4-203ENST00000585448 PIEZO1Q92508 2521 aa2.73□□□□□ -1.97
SMAD4-203ENST00000585448 PKD1L2Q7Z442 2459 aa2.72□□□□□ -1.97
SMAD4-203ENST00000585448 SMR3AQ99954 134 aa2.72□□□□□ -1.97
SMAD4-203ENST00000585448 SRRM2Q9UQ35 2752 aaKnown RBP2.72□□□□□ -1.97
SMAD4-203ENST00000585448 FBN1P35555 2871 aaKnown RBP2.71□□□□□ -1.97
SMAD4-203ENST00000585448 ASPMQ8IZT6 3477 aa2.7□□□□□ -1.98
SMAD4-203ENST00000585448 CHD8Q9HCK8 2581 aa2.7□□□□□ -1.98
SMAD4-203ENST00000585448 TENM4Q6N022 2769 aa2.7□□□□□ -1.98
SMAD4-203ENST00000585448 MEGF8Q7Z7M0 2845 aa2.69□□□□□ -1.98
SMAD4-203ENST00000585448 RELNP78509 3460 aa2.69□□□□□ -1.98
SMAD4-203ENST00000585448 VWFP04275 2813 aa2.68□□□□□ -1.98
SMAD4-203ENST00000585448 ACANP16112 2415 aa2.67□□□□□ -1.98
SMAD4-203ENST00000585448 SVEP1Q4LDE5 3571 aa2.67□□□□□ -1.98
SMAD4-203ENST00000585448 HELZ2Q9BYK8 2649 aaKnown RBP2.67□□□□□ -1.98
SMAD4-203ENST00000585448 HECTD1Q9ULT8 2610 aa2.67□□□□□ -1.98
SMAD4-203ENST00000585448 DMBT1Q9UGM3 2413 aaPredicted RBP2.67□□□□□ -1.98
SMAD4-203ENST00000585448 TTC28Q96AY4 2481 aa2.66□□□□□ -1.98
SMAD4-203ENST00000585448 ANK3Q12955 4377 aaKnown RBP2.66□□□□□ -1.98
SMAD4-203ENST00000585448 TGP01266 2768 aa2.66□□□□□ -1.98
SMAD4-203ENST00000585448 NIPBLQ6KC79 2804 aaeCLIP2.66□□□□□ -1.98
SMAD4-203ENST00000585448 BAHCC1Q9P281 2608 aa2.65□□□□□ -1.98
SMAD4-203ENST00000585448 BSNQ9UPA5 3926 aa2.65□□□□□ -1.99
SMAD4-203ENST00000585448 TNP1P09430 55 aa2.65□□□□□ -1.99
SMAD4-203ENST00000585448 EPG5Q9HCE0 2579 aa2.65□□□□□ -1.99
SMAD4-203ENST00000585448 MXRA5Q9NR99 2828 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms