RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 C1orf195Q5TG92 126 aa9.25□□□□□ -0.93
TVP23C-210ENST00000584811 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
TVP23C-210ENST00000584811 TRAV22A0A0B4J277 110 aa9.25□□□□□ -0.93
TVP23C-210ENST00000584811 C1orf64Q8NEQ6 169 aa9.24□□□□□ -0.93
TVP23C-210ENST00000584811 A0A1B0GVX0 72 aa9.23□□□□□ -0.93
TVP23C-210ENST00000584811 NDUFS5O43920 106 aa9.22□□□□□ -0.93
TVP23C-210ENST00000584811 Q6ZSA8 131 aa9.21□□□□□ -0.93
TVP23C-210ENST00000584811 V9GYY9 64 aa9.21□□□□□ -0.93
TVP23C-210ENST00000584811 KRTAP13-2Q52LG2 175 aa9.21□□□□□ -0.94
TVP23C-210ENST00000584811 ASB16-AS1Q495Z4 193 aa9.2□□□□□ -0.94
TVP23C-210ENST00000584811 SEC61GP60059 68 aa9.2□□□□□ -0.94
TVP23C-210ENST00000584811 CDK2AP2O75956 126 aa9.18□□□□□ -0.94
TVP23C-210ENST00000584811 PCOTHQ58A44 107 aa9.17□□□□□ -0.94
TVP23C-210ENST00000584811 FAT1Q14517 4588 aa9.16□□□□□ -0.94
TVP23C-210ENST00000584811 DYNC1H1Q14204 4646 aaKnown RBP9.14□□□□□ -0.95
TVP23C-210ENST00000584811 MRPL34Q9BQ48 92 aaKnown RBP9.13□□□□□ -0.95
TVP23C-210ENST00000584811 KMT2CQ8NEZ4 4911 aaKnown RBP9.12□□□□□ -0.95
TVP23C-210ENST00000584811 KRTAP1-4P0C5Y4 121 aa9.12□□□□□ -0.95
TVP23C-210ENST00000584811 Q5W150 140 aa9.1□□□□□ -0.95
TVP23C-210ENST00000584811 CYP4F30PQ9H0H9 118 aa9.1□□□□□ -0.95
TVP23C-210ENST00000584811 CD164Q04900 197 aa9.09□□□□□ -0.95
TVP23C-210ENST00000584811 SSBP3-AS1Q7Z2R9 100 aa9.09□□□□□ -0.95
TVP23C-210ENST00000584811 PSPHP1O15172 72 aa9.09□□□□□ -0.95
TVP23C-210ENST00000584811 SMR3BP02814 79 aaPredicted RBP9.07□□□□□ -0.96
TVP23C-210ENST00000584811 H3BPC8 53 aa9.06□□□□□ -0.96
TVP23C-210ENST00000584811 RETNLBQ9BQ08 111 aa9.06□□□□□ -0.96
TVP23C-210ENST00000584811 TP53AIP1Q9HCN2 124 aa9.06□□□□□ -0.96
TVP23C-210ENST00000584811 PLA2G1BP04054 148 aaKnown RBP9.03□□□□□ -0.96
TVP23C-210ENST00000584811 KRTAP21-3Q3LHN1 58 aa9.03□□□□□ -0.96
TVP23C-210ENST00000584811 SPANXA2-OT1Q8N9U9 137 aa9.01□□□□□ -0.97
TVP23C-210ENST00000584811 APOBP04114 4563 aaKnown RBP9.01□□□□□ -0.97
TVP23C-210ENST00000584811 RYR2Q92736 4967 aa8.98□□□□□ -0.97
TVP23C-210ENST00000584811 PMAIP1Q13794 54 aa8.98□□□□□ -0.97
TVP23C-210ENST00000584811 IGLV7-46A0A075B6I9 117 aa8.98□□□□□ -0.97
TVP23C-210ENST00000584811 A8MU10 97 aa8.98□□□□□ -0.97
TVP23C-210ENST00000584811 LINC00313P59037 77 aa8.97□□□□□ -0.97
TVP23C-210ENST00000584811 KRTAP13-3Q3SY46 172 aa8.97□□□□□ -0.97
TVP23C-210ENST00000584811 Q8N9P0 234 aaPredicted RBP8.97□□□□□ -0.97
TVP23C-210ENST00000584811 PRR26Q8N8Z3 221 aa8.96□□□□□ -0.97
TVP23C-210ENST00000584811 COA5Q86WW8 74 aa8.95□□□□□ -0.98
TVP23C-210ENST00000584811 TYMSOSQ8TAI1 123 aa8.95□□□□□ -0.98
TVP23C-210ENST00000584811 Q1T7F1 81 aa8.93□□□□□ -0.98
TVP23C-210ENST00000584811 A8MUN3 132 aa8.92□□□□□ -0.98
TVP23C-210ENST00000584811 KRTAP16-1A8MUX0 517 aa8.89□□□□□ -0.99
TVP23C-210ENST00000584811 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
TVP23C-210ENST00000584811 C4orf48Q5BLP8 95 aa8.88□□□□□ -0.99
TVP23C-210ENST00000584811 A0A1B0GVY2 172 aa8.87□□□□□ -0.99
TVP23C-210ENST00000584811 HRES1P13985 223 aa8.87□□□□□ -0.99
TVP23C-210ENST00000584811 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
TVP23C-210ENST00000584811 LIMD2Q9BT23 127 aa8.84□□□□□ -0.99
TVP23C-210ENST00000584811 SPTSSBQ8NFR3 76 aa8.84□□□□□ -0.99
TVP23C-210ENST00000584811 LRP1Q07954 4544 aaKnown RBP8.84□□□□□ -0.99
TVP23C-210ENST00000584811 SPAG11AQ6PDA7 123 aa8.82□□□□□ -1
TVP23C-210ENST00000584811 Q5VV11 94 aa8.81□□□□□ -1
TVP23C-210ENST00000584811 LINC00304Q8N9R0 145 aa8.81□□□□□ -1
TVP23C-210ENST00000584811 RYR3Q15413 4870 aa8.81□□□□□ -1
TVP23C-210ENST00000584811 SPINK1P00995 79 aa8.81□□□□□ -1
TVP23C-210ENST00000584811 KRTAP10-4P60372 401 aaPredicted RBP8.81□□□□□ -1
TVP23C-210ENST00000584811 PKHD1L1Q86WI1 4243 aa8.8□□□□□ -1
TVP23C-210ENST00000584811 PRR15LQ9BU68 103 aa8.8□□□□□ -1
TVP23C-210ENST00000584811 FAM229AH3BQW9 127 aa8.79□□□□□ -1
TVP23C-210ENST00000584811 CHKB-CPT1BH3BT56 60 aa8.79□□□□□ -1
TVP23C-210ENST00000584811 IGKV2D-30A0A075B6S6 120 aa8.78□□□□□ -1
TVP23C-210ENST00000584811 IGKV2-30P06310 120 aa8.78□□□□□ -1
TVP23C-210ENST00000584811 C9orf92A6NGG3 77 aa8.74□□□□□ -1.01
TVP23C-210ENST00000584811 HSPG2P98160 4391 aa8.7□□□□□ -1.02
TVP23C-210ENST00000584811 FLG2Q5D862 2391 aaPredicted RBP8.68□□□□□ -1.02
TVP23C-210ENST00000584811 A6NED7 52 aa8.67□□□□□ -1.02
TVP23C-210ENST00000584811 MYCBP2O75592 4640 aa8.66□□□□□ -1.02
TVP23C-210ENST00000584811 DMAC1Q96GE9 116 aa8.66□□□□□ -1.02
TVP23C-210ENST00000584811 ACYP2P14621 99 aa8.65□□□□□ -1.02
TVP23C-210ENST00000584811 RBM12B-AS1Q9P1G2 102 aa8.64□□□□□ -1.03
TVP23C-210ENST00000584811 TNXBP22105 4242 aa8.63□□□□□ -1.03
TVP23C-210ENST00000584811 LINC01558Q9Y6Z2 57 aa8.63□□□□□ -1.03
TVP23C-210ENST00000584811 LCA10Q71F78 164 aa8.62□□□□□ -1.03
TVP23C-210ENST00000584811 DMBT1Q9UGM3 2413 aaPredicted RBP8.62□□□□□ -1.03
TVP23C-210ENST00000584811 KTN1-AS1Q86SY8 53 aa8.61□□□□□ -1.03
TVP23C-210ENST00000584811 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
TVP23C-210ENST00000584811 KIAA1109Q2LD37 5005 aa8.6□□□□□ -1.03
TVP23C-210ENST00000584811 Q8N1X5 172 aa8.6□□□□□ -1.03
TVP23C-210ENST00000584811 Q75L30 129 aa8.6□□□□□ -1.03
TVP23C-210ENST00000584811 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
TVP23C-210ENST00000584811 FAT3Q8TDW7 4589 aa8.59□□□□□ -1.03
TVP23C-210ENST00000584811 SPINK7P58062 85 aa8.58□□□□□ -1.04
TVP23C-210ENST00000584811 C7orf65Q6ZTY9 151 aa8.57□□□□□ -1.04
TVP23C-210ENST00000584811 RYR1P21817 5038 aa8.55□□□□□ -1.04
TVP23C-210ENST00000584811 ATP11AUNQ6ZP68 121 aa8.5□□□□□ -1.05
TVP23C-210ENST00000584811 EPPK1P58107 5090 aaKnown RBP8.5□□□□□ -1.05
TVP23C-210ENST00000584811 Q5VSD8 79 aa8.5□□□□□ -1.05
TVP23C-210ENST00000584811 A8MUU9 505 aa8.49□□□□□ -1.05
TVP23C-210ENST00000584811 C20orf166-AS1Q96NR2 134 aa8.49□□□□□ -1.05
TVP23C-210ENST00000584811 A6NN06 94 aa8.46□□□□□ -1.05
TVP23C-210ENST00000584811 KRTAP3-1Q9BYR8 98 aa8.42□□□□□ -1.06
TVP23C-210ENST00000584811 CDC42SE1Q9NRR8 79 aa8.42□□□□□ -1.06
TVP23C-210ENST00000584811 A0A1B0GU69 56 aa8.41□□□□□ -1.06
TVP23C-210ENST00000584811 KRTAP10-8P60410 259 aa8.4□□□□□ -1.06
TVP23C-210ENST00000584811 PRAC1Q96KF2 57 aa8.39□□□□□ -1.07
TVP23C-210ENST00000584811 LPAP08519 4548 aa8.37□□□□□ -1.07
TVP23C-210ENST00000584811 ADM2Q7Z4H4 148 aa8.33□□□□□ -1.08
TVP23C-210ENST00000584811 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms