RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 Q5XG85 94 aa2.8□□□□□ -1.96
RTTN-206ENST00000581161 Q8NDZ9 215 aa2.8□□□□□ -1.96
RTTN-206ENST00000581161 SMR3BP02814 79 aaPredicted RBP2.8□□□□□ -1.96
RTTN-206ENST00000581161 PKD1P98161 4303 aa2.8□□□□□ -1.96
RTTN-206ENST00000581161 Q8N1X5 172 aa2.8□□□□□ -1.96
RTTN-206ENST00000581161 DNAH5Q8TE73 4624 aa2.8□□□□□ -1.96
RTTN-206ENST00000581161 FLNAP21333 2647 aaKnown RBP2.79□□□□□ -1.96
RTTN-206ENST00000581161 NBEAL2Q6ZNJ1 2754 aa2.79□□□□□ -1.96
RTTN-206ENST00000581161 HECTD4Q9Y4D8 3996 aa2.79□□□□□ -1.96
RTTN-206ENST00000581161 C19orf73Q9NVV2 129 aa2.79□□□□□ -1.96
RTTN-206ENST00000581161 ZNF861PO60384 105 aa2.79□□□□□ -1.96
RTTN-206ENST00000581161 MEGF8Q7Z7M0 2845 aa2.79□□□□□ -1.96
RTTN-206ENST00000581161 MTORP42345 2549 aa2.79□□□□□ -1.96
RTTN-206ENST00000581161 ACANP16112 2415 aa2.78□□□□□ -1.96
RTTN-206ENST00000581161 RYR2Q92736 4967 aa2.77□□□□□ -1.97
RTTN-206ENST00000581161 FAT2Q9NYQ8 4349 aa2.77□□□□□ -1.97
RTTN-206ENST00000581161 KRTAP16-1A8MUX0 517 aa2.77□□□□□ -1.97
RTTN-206ENST00000581161 TNP2Q05952 138 aa2.77□□□□□ -1.97
RTTN-206ENST00000581161 OCR1Q9BZK8 76 aa2.77□□□□□ -1.97
RTTN-206ENST00000581161 GVQW2A0A096LPI5 108 aaPredicted RBP2.77□□□□□ -1.97
RTTN-206ENST00000581161 Q8N377 158 aa2.77□□□□□ -1.97
RTTN-206ENST00000581161 FN1P02751 2386 aaKnown RBP2.77□□□□□ -1.97
RTTN-206ENST00000581161 C20orf166-AS1Q96NR2 134 aa2.77□□□□□ -1.97
RTTN-206ENST00000581161 Q8NAQ8 132 aa2.76□□□□□ -1.97
RTTN-206ENST00000581161 LINC00612Q8N6U2 182 aa2.76□□□□□ -1.97
RTTN-206ENST00000581161 KLKP1Q107X0 134 aa2.76□□□□□ -1.97
RTTN-206ENST00000581161 IGFL1Q6UW32 110 aa2.75□□□□□ -1.97
RTTN-206ENST00000581161 C15orf56Q8N910 161 aa2.75□□□□□ -1.97
RTTN-206ENST00000581161 LRP1BQ9NZR2 4599 aa2.75□□□□□ -1.97
RTTN-206ENST00000581161 SACSQ9NZJ4 4579 aa2.75□□□□□ -1.97
RTTN-206ENST00000581161 ZCCHC13Q8WW36 166 aaKnown RBP2.75□□□□□ -1.97
RTTN-206ENST00000581161 KRTAP10-3P60369 221 aa2.74□□□□□ -1.97
RTTN-206ENST00000581161 M0QZ58 72 aa2.73□□□□□ -1.97
RTTN-206ENST00000581161 FP248Q71RG6 208 aaPredicted RBP2.73□□□□□ -1.97
RTTN-206ENST00000581161 SPATA8Q6RVD6 105 aa2.73□□□□□ -1.97
RTTN-206ENST00000581161 SPANXA2-OT1Q8N9U9 137 aa2.73□□□□□ -1.97
RTTN-206ENST00000581161 FRAS1Q86XX4 4008 aa2.73□□□□□ -1.97
RTTN-206ENST00000581161 FAM229BQ4G0N7 80 aa2.72□□□□□ -1.97
RTTN-206ENST00000581161 Q8N9P0 234 aaPredicted RBP2.72□□□□□ -1.97
RTTN-206ENST00000581161 PRR34Q9NV39 138 aa2.72□□□□□ -1.97
RTTN-206ENST00000581161 A0A087WTM6 91 aa2.71□□□□□ -1.97
RTTN-206ENST00000581161 A0A087X002 238 aa2.71□□□□□ -1.97
RTTN-206ENST00000581161 SRRM2Q9UQ35 2752 aaKnown RBP2.71□□□□□ -1.97
RTTN-206ENST00000581161 DNAH10OSP0CZ25 163 aa2.71□□□□□ -1.98
RTTN-206ENST00000581161 TENM2Q9NT68 2774 aa2.71□□□□□ -1.98
RTTN-206ENST00000581161 FAM168BA1KXE4 195 aa2.7□□□□□ -1.98
RTTN-206ENST00000581161 HIVEP2P31629 2446 aa2.7□□□□□ -1.98
RTTN-206ENST00000581161 HECTD1Q9ULT8 2610 aa2.7□□□□□ -1.98
RTTN-206ENST00000581161 A0A0G2JQZ4 141 aa2.7□□□□□ -1.98
RTTN-206ENST00000581161 FASNP49327 2511 aaKnown RBP2.69□□□□□ -1.98
RTTN-206ENST00000581161 RPL37P61927 97 aaKnown RBP2.69□□□□□ -1.98
RTTN-206ENST00000581161 PKHD1L1Q86WI1 4243 aa2.69□□□□□ -1.98
RTTN-206ENST00000581161 ANAPC11Q9NYG5 84 aa2.69□□□□□ -1.98
RTTN-206ENST00000581161 RYR3Q15413 4870 aa2.69□□□□□ -1.98
RTTN-206ENST00000581161 SPRR4Q96PI1 79 aa2.68□□□□□ -1.98
RTTN-206ENST00000581161 KRTAP24-1Q3LI83 254 aa2.68□□□□□ -1.98
RTTN-206ENST00000581161 KCNQ1DNQ9H478 68 aa2.68□□□□□ -1.98
RTTN-206ENST00000581161 KMT2CQ8NEZ4 4911 aaKnown RBP2.68□□□□□ -1.98
RTTN-206ENST00000581161 STAB2Q8WWQ8 2551 aa2.68□□□□□ -1.98
RTTN-206ENST00000581161 NOTCH2Q04721 2471 aa2.67□□□□□ -1.98
RTTN-206ENST00000581161 ALMS1Q8TCU4 4167 aa2.67□□□□□ -1.98
RTTN-206ENST00000581161 CASC10Q5T4H9 136 aa2.67□□□□□ -1.98
RTTN-206ENST00000581161 ATRQ13535 2644 aa2.66□□□□□ -1.98
RTTN-206ENST00000581161 RYR1P21817 5038 aa2.66□□□□□ -1.98
RTTN-206ENST00000581161 PP632Q6XCG6 107 aa2.65□□□□□ -1.98
RTTN-206ENST00000581161 KRTAP26-1Q6PEX3 210 aa2.65□□□□□ -1.99
RTTN-206ENST00000581161 PKHD1P08F94 4074 aa2.65□□□□□ -1.99
RTTN-206ENST00000581161 Q75L30 129 aa2.64□□□□□ -1.99
RTTN-206ENST00000581161 NOTCH2NLQ7Z3S9 236 aa2.64□□□□□ -1.99
RTTN-206ENST00000581161 KRTAP10-11P60412 298 aa2.64□□□□□ -1.99
RTTN-206ENST00000581161 ADM2Q7Z4H4 148 aa2.63□□□□□ -1.99
RTTN-206ENST00000581161 APOBP04114 4563 aaKnown RBP2.63□□□□□ -1.99
RTTN-206ENST00000581161 FAT3Q8TDW7 4589 aa2.62□□□□□ -1.99
RTTN-206ENST00000581161 LINC01558Q9Y6Z2 57 aa2.61□□□□□ -1.99
RTTN-206ENST00000581161 KMT2AQ03164 3969 aa2.61□□□□□ -1.99
RTTN-206ENST00000581161 SPRR1BP22528 89 aa2.61□□□□□ -1.99
RTTN-206ENST00000581161 CNBPP62633 177 aaKnown RBP2.61□□□□□ -1.99
RTTN-206ENST00000581161 TNP1P09430 55 aa2.6□□□□□ -1.99
RTTN-206ENST00000581161 KRTAP4-16G5E9R7 235 aaPredicted RBP2.6□□□□□ -1.99
RTTN-206ENST00000581161 SPRR1AP35321 89 aa2.6□□□□□ -1.99
RTTN-206ENST00000581161 DYNC1H1Q14204 4646 aaKnown RBP2.6□□□□□ -1.99
RTTN-206ENST00000581161 K7EIL1 84 aa2.6□□□□□ -1.99
RTTN-206ENST00000581161 KRTAP7-1Q8IUC3 87 aa2.6□□□□□ -1.99
RTTN-206ENST00000581161 LCE6AA0A183 80 aa2.59□□□□□ -1.99
RTTN-206ENST00000581161 STAB1Q9NY15 2570 aa2.59□□□□□ -1.99
RTTN-206ENST00000581161 Q6ZR54 194 aa2.58□□□□□ -2
RTTN-206ENST00000581161 C10orf95Q9H7T3 257 aa2.58□□□□□ -2
RTTN-206ENST00000581161 A8MU10 97 aa2.58□□□□□ -2
RTTN-206ENST00000581161 NOTCH1P46531 2555 aa2.58□□□□□ -2
RTTN-206ENST00000581161 TGP01266 2768 aa2.58□□□□□ -2
RTTN-206ENST00000581161 Q5VV11 94 aa2.58□□□□□ -2
RTTN-206ENST00000581161 PRAC1Q96KF2 57 aa2.58□□□□□ -2
RTTN-206ENST00000581161 VPS13BQ7Z7G8 4022 aa2.58□□□□□ -2
RTTN-206ENST00000581161 Q5W150 140 aa2.57□□□□□ -2
RTTN-206ENST00000581161 F8P00451 2351 aa2.57□□□□□ -2
RTTN-206ENST00000581161 MMP24-AS1A0A0U1RRL7 71 aa2.56□□□□□ -2
RTTN-206ENST00000581161 KRTAP29-1A8MX34 341 aaPredicted RBP2.55□□□□□ -2
RTTN-206ENST00000581161 HSPG2P98160 4391 aa2.54□□□□□ -2
RTTN-206ENST00000581161 ABCA13Q86UQ4 5058 aa2.54□□□□□ -2
RTTN-206ENST00000581161 LINC00472Q9H8W2 130 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 255.8 ms