RNA–Protein interactions for RNA: ENST00000576894.5

SRRM2-229, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 2,210 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-229ENST00000576894 HYDINQ4G0P3 5121 aa12.23□□□□□ -0.45
SRRM2-229ENST00000576894 CDK2AP2O75956 126 aa12.23□□□□□ -0.45
SRRM2-229ENST00000576894 KRTAP10-2P60368 255 aa12.19□□□□□ -0.46
SRRM2-229ENST00000576894 CD164Q04900 197 aa12.18□□□□□ -0.46
SRRM2-229ENST00000576894 MRPL34Q9BQ48 92 aaKnown RBP12.18□□□□□ -0.46
SRRM2-229ENST00000576894 CIRBP-AS1Q8TBR5 109 aa12.17□□□□□ -0.46
SRRM2-229ENST00000576894 A0A087X002 238 aa12.15□□□□□ -0.46
SRRM2-229ENST00000576894 SSBP3-AS1Q7Z2R9 100 aa12.15□□□□□ -0.46
SRRM2-229ENST00000576894 NOTCH2NLQ7Z3S9 236 aa12.15□□□□□ -0.46
SRRM2-229ENST00000576894 FAT2Q9NYQ8 4349 aa12.14□□□□□ -0.47
SRRM2-229ENST00000576894 LRP1BQ9NZR2 4599 aa12.14□□□□□ -0.47
SRRM2-229ENST00000576894 IGLV7-46A0A075B6I9 117 aa12.14□□□□□ -0.47
SRRM2-229ENST00000576894 A8MUN3 132 aa12.14□□□□□ -0.47
SRRM2-229ENST00000576894 PKD1P98161 4303 aa12.13□□□□□ -0.47
SRRM2-229ENST00000576894 V9GYY9 64 aa12.13□□□□□ -0.47
SRRM2-229ENST00000576894 NDUFS5O43920 106 aa12.11□□□□□ -0.47
SRRM2-229ENST00000576894 Q6ZSA8 131 aa12.09□□□□□ -0.47
SRRM2-229ENST00000576894 Q5VV11 94 aa12.07□□□□□ -0.48
SRRM2-229ENST00000576894 SPINK6Q6UWN8 80 aa12.07□□□□□ -0.48
SRRM2-229ENST00000576894 PCOTHQ58A44 107 aa12.06□□□□□ -0.48
SRRM2-229ENST00000576894 Q8N9P0 234 aaPredicted RBP12.06□□□□□ -0.48
SRRM2-229ENST00000576894 KRTAP10-1P60331 282 aa12.03□□□□□ -0.48
SRRM2-229ENST00000576894 C8orf87E5RJ46 101 aa12.01□□□□□ -0.49
SRRM2-229ENST00000576894 COA5Q86WW8 74 aa12□□□□□ -0.49
SRRM2-229ENST00000576894 LIMD2Q9BT23 127 aa12□□□□□ -0.49
SRRM2-229ENST00000576894 KRTAP13-2Q52LG2 175 aa11.99□□□□□ -0.49
SRRM2-229ENST00000576894 A8MU10 97 aa11.99□□□□□ -0.49
SRRM2-229ENST00000576894 KRTAP13-3Q3SY46 172 aa11.99□□□□□ -0.49
SRRM2-229ENST00000576894 PRR15LQ9BU68 103 aa11.96□□□□□ -0.49
SRRM2-229ENST00000576894 Q5W150 140 aa11.96□□□□□ -0.49
SRRM2-229ENST00000576894 LOC101927531A0A1B0GV80 90 aa11.95□□□□□ -0.5
SRRM2-229ENST00000576894 VPS13BQ7Z7G8 4022 aa11.95□□□□□ -0.5
SRRM2-229ENST00000576894 CHKB-CPT1BH3BT56 60 aa11.94□□□□□ -0.5
SRRM2-229ENST00000576894 PMAIP1Q13794 54 aa11.93□□□□□ -0.5
SRRM2-229ENST00000576894 KRTAP1-4P0C5Y4 121 aa11.9□□□□□ -0.51
SRRM2-229ENST00000576894 LINC00313P59037 77 aa11.88□□□□□ -0.51
SRRM2-229ENST00000576894 PKHD1P08F94 4074 aa11.87□□□□□ -0.51
SRRM2-229ENST00000576894 Q75L30 129 aa11.86□□□□□ -0.51
SRRM2-229ENST00000576894 SACSQ9NZJ4 4579 aa11.85□□□□□ -0.51
SRRM2-229ENST00000576894 HRES1P13985 223 aa11.84□□□□□ -0.51
SRRM2-229ENST00000576894 SEC61GP60059 68 aa11.82□□□□□ -0.52
SRRM2-229ENST00000576894 FAM229AH3BQW9 127 aa11.79□□□□□ -0.52
SRRM2-229ENST00000576894 LCA10Q71F78 164 aa11.79□□□□□ -0.52
SRRM2-229ENST00000576894 KRTAP21-3Q3LHN1 58 aa11.78□□□□□ -0.52
SRRM2-229ENST00000576894 A6NED7 52 aa11.78□□□□□ -0.52
SRRM2-229ENST00000576894 KRTAP16-1A8MUX0 517 aa11.78□□□□□ -0.52
SRRM2-229ENST00000576894 SPAG11AQ6PDA7 123 aa11.76□□□□□ -0.53
SRRM2-229ENST00000576894 LINC01558Q9Y6Z2 57 aa11.75□□□□□ -0.53
SRRM2-229ENST00000576894 PLA2G1BP04054 148 aaKnown RBP11.74□□□□□ -0.53
SRRM2-229ENST00000576894 SPTSSBQ8NFR3 76 aa11.72□□□□□ -0.53
SRRM2-229ENST00000576894 TYMSOSQ8TAI1 123 aa11.71□□□□□ -0.54
SRRM2-229ENST00000576894 IGKV2-30P06310 120 aa11.7□□□□□ -0.54
SRRM2-229ENST00000576894 ATP11AUNQ6ZP68 121 aa11.7□□□□□ -0.54
SRRM2-229ENST00000576894 C4orf48Q5BLP8 95 aa11.69□□□□□ -0.54
SRRM2-229ENST00000576894 DYNC1H1Q14204 4646 aaKnown RBP11.68□□□□□ -0.54
SRRM2-229ENST00000576894 SPINK1P00995 79 aa11.68□□□□□ -0.54
SRRM2-229ENST00000576894 ACYP2P14621 99 aa11.68□□□□□ -0.54
SRRM2-229ENST00000576894 CDC42SE1Q9NRR8 79 aa11.67□□□□□ -0.54
SRRM2-229ENST00000576894 RETNLBQ9BQ08 111 aa11.67□□□□□ -0.54
SRRM2-229ENST00000576894 DMAC1Q96GE9 116 aa11.66□□□□□ -0.54
SRRM2-229ENST00000576894 KTN1-AS1Q86SY8 53 aa11.6□□□□□ -0.55
SRRM2-229ENST00000576894 PRR26Q8N8Z3 221 aa11.6□□□□□ -0.55
SRRM2-229ENST00000576894 FAT1Q14517 4588 aa11.6□□□□□ -0.55
SRRM2-229ENST00000576894 A6NN06 94 aa11.59□□□□□ -0.55
SRRM2-229ENST00000576894 SPINK7P58062 85 aa11.59□□□□□ -0.55
SRRM2-229ENST00000576894 RPS29P62273 56 aaKnown RBP11.59□□□□□ -0.55
SRRM2-229ENST00000576894 SMR3BP02814 79 aaPredicted RBP11.56□□□□□ -0.56
SRRM2-229ENST00000576894 LINC00304Q8N9R0 145 aa11.55□□□□□ -0.56
SRRM2-229ENST00000576894 APOBP04114 4563 aaKnown RBP11.53□□□□□ -0.56
SRRM2-229ENST00000576894 IGKV2D-30A0A075B6S6 120 aa11.49□□□□□ -0.57
SRRM2-229ENST00000576894 A0A1B0GVY2 172 aa11.47□□□□□ -0.57
SRRM2-229ENST00000576894 RYR2Q92736 4967 aa11.46□□□□□ -0.57
SRRM2-229ENST00000576894 KMT2CQ8NEZ4 4911 aaKnown RBP11.44□□□□□ -0.58
SRRM2-229ENST00000576894 KRTAP10-4P60372 401 aaPredicted RBP11.42□□□□□ -0.58
SRRM2-229ENST00000576894 RBM12B-AS1Q9P1G2 102 aa11.4□□□□□ -0.58
SRRM2-229ENST00000576894 C7orf65Q6ZTY9 151 aa11.38□□□□□ -0.59
SRRM2-229ENST00000576894 PKHD1L1Q86WI1 4243 aa11.38□□□□□ -0.59
SRRM2-229ENST00000576894 A0A1B0GU69 56 aa11.29□□□□□ -0.6
SRRM2-229ENST00000576894 C20orf166-AS1Q96NR2 134 aa11.29□□□□□ -0.6
SRRM2-229ENST00000576894 A8MUU9 505 aa11.29□□□□□ -0.6
SRRM2-229ENST00000576894 C9orf92A6NGG3 77 aa11.24□□□□□ -0.61
SRRM2-229ENST00000576894 Q8N1X5 172 aa11.2□□□□□ -0.62
SRRM2-229ENST00000576894 SPATA8Q6RVD6 105 aa11.16□□□□□ -0.62
SRRM2-229ENST00000576894 LRP1Q07954 4544 aaKnown RBP11.15□□□□□ -0.62
SRRM2-229ENST00000576894 RYR3Q15413 4870 aa11.1□□□□□ -0.63
SRRM2-229ENST00000576894 UQCR11O14957 56 aa11.09□□□□□ -0.63
SRRM2-229ENST00000576894 MIR22HGQ0VDD5 57 aa11.09□□□□□ -0.63
SRRM2-229ENST00000576894 PRAC1Q96KF2 57 aa11.09□□□□□ -0.63
SRRM2-229ENST00000576894 HSPG2P98160 4391 aa11.08□□□□□ -0.64
SRRM2-229ENST00000576894 TNXBP22105 4242 aa11.08□□□□□ -0.64
SRRM2-229ENST00000576894 ADM2Q7Z4H4 148 aa11.06□□□□□ -0.64
SRRM2-229ENST00000576894 FAT3Q8TDW7 4589 aa11.05□□□□□ -0.64
SRRM2-229ENST00000576894 KRTAP3-1Q9BYR8 98 aa11.05□□□□□ -0.64
SRRM2-229ENST00000576894 FLG2Q5D862 2391 aaPredicted RBP11.02□□□□□ -0.65
SRRM2-229ENST00000576894 KRTAP10-8P60410 259 aa10.99□□□□□ -0.65
SRRM2-229ENST00000576894 RYR1P21817 5038 aa10.94□□□□□ -0.66
SRRM2-229ENST00000576894 Q5VSD8 79 aa10.91□□□□□ -0.66
SRRM2-229ENST00000576894 KRTAP17-1Q9BYP8 105 aa10.9□□□□□ -0.66
SRRM2-229ENST00000576894 COX6B2Q6YFQ2 88 aa10.89□□□□□ -0.67
SRRM2-229ENST00000576894 MYCBP2O75592 4640 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms