RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 C1orf195Q5TG92 126 aa16.71■□□□□ 0.27
CTDNEP1-208ENST00000573600 C8orf17Q9NRJ1 99 aa16.71■□□□□ 0.27
CTDNEP1-208ENST00000573600 PKHD1L1Q86WI1 4243 aa16.71■□□□□ 0.27
CTDNEP1-208ENST00000573600 hDV103S1A0JD37 113 aa16.68■□□□□ 0.26
CTDNEP1-208ENST00000573600 HSPG2P98160 4391 aa16.68■□□□□ 0.26
CTDNEP1-208ENST00000573600 RYR1P21817 5038 aa16.66■□□□□ 0.26
CTDNEP1-208ENST00000573600 C20orf197Q8N268 126 aa16.62■□□□□ 0.25
CTDNEP1-208ENST00000573600 BIRC6Q9NR09 4857 aa16.61■□□□□ 0.25
CTDNEP1-208ENST00000573600 C8orf87E5RJ46 101 aa16.59■□□□□ 0.25
CTDNEP1-208ENST00000573600 TMEM254Q8TBM7 123 aa16.56■□□□□ 0.24
CTDNEP1-208ENST00000573600 Q8N1X5 172 aa16.55■□□□□ 0.24
CTDNEP1-208ENST00000573600 KLKP1Q107X0 134 aa16.54■□□□□ 0.24
CTDNEP1-208ENST00000573600 NOTCH2NLQ7Z3S9 236 aa16.53■□□□□ 0.24
CTDNEP1-208ENST00000573600 C5orf47Q569G3 176 aa16.53■□□□□ 0.24
CTDNEP1-208ENST00000573600 MRPL34Q9BQ48 92 aaKnown RBP16.53■□□□□ 0.24
CTDNEP1-208ENST00000573600 KRTAP17-1Q9BYP8 105 aa16.48■□□□□ 0.23
CTDNEP1-208ENST00000573600 LINC00313P59037 77 aa16.48■□□□□ 0.23
CTDNEP1-208ENST00000573600 CYSTM1Q9H1C7 97 aa16.48■□□□□ 0.23
CTDNEP1-208ENST00000573600 TP53AIP1Q9HCN2 124 aa16.48■□□□□ 0.23
CTDNEP1-208ENST00000573600 SNURFQ9Y675 71 aa16.47■□□□□ 0.23
CTDNEP1-208ENST00000573600 A0A0U1RQV1 116 aa16.45■□□□□ 0.22
CTDNEP1-208ENST00000573600 KRTAP10-8P60410 259 aa16.44■□□□□ 0.22
CTDNEP1-208ENST00000573600 KIAA1109Q2LD37 5005 aa16.4■□□□□ 0.22
CTDNEP1-208ENST00000573600 NDUFS5O43920 106 aa16.4■□□□□ 0.22
CTDNEP1-208ENST00000573600 MP68P56378 58 aa16.4■□□□□ 0.22
CTDNEP1-208ENST00000573600 NDUFC1O43677 76 aa16.39■□□□□ 0.21
CTDNEP1-208ENST00000573600 H0Y9P7 68 aa16.34■□□□□ 0.21
CTDNEP1-208ENST00000573600 H3BPC8 53 aa16.33■□□□□ 0.21
CTDNEP1-208ENST00000573600 TMEM258P61165 79 aa16.33■□□□□ 0.21
CTDNEP1-208ENST00000573600 TRAV22A0A0B4J277 110 aa16.32■□□□□ 0.2
CTDNEP1-208ENST00000573600 H7BZZ5 65 aa16.32■□□□□ 0.2
CTDNEP1-208ENST00000573600 ZCCHC13Q8WW36 166 aaKnown RBP16.3■□□□□ 0.2
CTDNEP1-208ENST00000573600 KRTAP16-1A8MUX0 517 aa16.27■□□□□ 0.19
CTDNEP1-208ENST00000573600 Q8N9P0 234 aaPredicted RBP16.27■□□□□ 0.19
CTDNEP1-208ENST00000573600 LINC00208Q96KT6 92 aa16.25■□□□□ 0.19
CTDNEP1-208ENST00000573600 TNXBP22105 4242 aa16.23■□□□□ 0.19
CTDNEP1-208ENST00000573600 LRP1Q07954 4544 aaKnown RBP16.21■□□□□ 0.18
CTDNEP1-208ENST00000573600 FAT3Q8TDW7 4589 aa16.19■□□□□ 0.18
CTDNEP1-208ENST00000573600 FLG2Q5D862 2391 aaPredicted RBP16.19■□□□□ 0.18
CTDNEP1-208ENST00000573600 C1orf64Q8NEQ6 169 aa16.18■□□□□ 0.18
CTDNEP1-208ENST00000573600 RETNLBQ9BQ08 111 aa16.17■□□□□ 0.18
CTDNEP1-208ENST00000573600 MT1HL1P0DM35 61 aa16.14■□□□□ 0.17
CTDNEP1-208ENST00000573600 OXTP01178 125 aa16.13■□□□□ 0.17
CTDNEP1-208ENST00000573600 FAM236DA0A1B0GTK5 79 aa16.12■□□□□ 0.17
CTDNEP1-208ENST00000573600 FAM236CP0DP71 79 aa16.12■□□□□ 0.17
CTDNEP1-208ENST00000573600 HERC2O95714 4834 aa16.12■□□□□ 0.17
CTDNEP1-208ENST00000573600 Q5W150 140 aa16.09■□□□□ 0.17
CTDNEP1-208ENST00000573600 KRTAP13-3Q3SY46 172 aa16.08■□□□□ 0.17
CTDNEP1-208ENST00000573600 ATP5EP56381 51 aaPredicted RBP16.07■□□□□ 0.16
CTDNEP1-208ENST00000573600 FP248Q71RG6 208 aaPredicted RBP16.05■□□□□ 0.16
CTDNEP1-208ENST00000573600 LOC101927531A0A1B0GV80 90 aa16.02■□□□□ 0.15
CTDNEP1-208ENST00000573600 C9orf92A6NGG3 77 aa16.02■□□□□ 0.15
CTDNEP1-208ENST00000573600 KRTAP4-5Q9BYR2 181 aa16.02■□□□□ 0.15
CTDNEP1-208ENST00000573600 C20orf166-AS1Q96NR2 134 aa15.94■□□□□ 0.14
CTDNEP1-208ENST00000573600 A8MUU9 505 aa15.92■□□□□ 0.14
CTDNEP1-208ENST00000573600 SPANXA2-OT1Q8N9U9 137 aa15.9■□□□□ 0.14
CTDNEP1-208ENST00000573600 DMBT1Q9UGM3 2413 aaPredicted RBP15.9■□□□□ 0.14
CTDNEP1-208ENST00000573600 MYCBP2O75592 4640 aa15.89■□□□□ 0.13
CTDNEP1-208ENST00000573600 RPS28P62857 69 aaKnown RBP15.88■□□□□ 0.13
CTDNEP1-208ENST00000573600 PCOTHQ58A44 107 aa15.86■□□□□ 0.13
CTDNEP1-208ENST00000573600 CYP4F30PQ9H0H9 118 aa15.86■□□□□ 0.13
CTDNEP1-208ENST00000573600 IGLV7-46A0A075B6I9 117 aa15.85■□□□□ 0.13
CTDNEP1-208ENST00000573600 IGKV2-30P06310 120 aa15.83■□□□□ 0.13
CTDNEP1-208ENST00000573600 SERP1Q9Y6X1 66 aa15.82■□□□□ 0.12
CTDNEP1-208ENST00000573600 Q75L30 129 aa15.78■□□□□ 0.12
CTDNEP1-208ENST00000573600 PCLOQ9Y6V0 5065 aa15.75■□□□□ 0.11
CTDNEP1-208ENST00000573600 PRR4Q16378 134 aa15.74■□□□□ 0.11
CTDNEP1-208ENST00000573600 ABCA13Q86UQ4 5058 aa15.71■□□□□ 0.11
CTDNEP1-208ENST00000573600 IGKV2D-30A0A075B6S6 120 aa15.69■□□□□ 0.1
CTDNEP1-208ENST00000573600 C7orf65Q6ZTY9 151 aa15.65■□□□□ 0.1
CTDNEP1-208ENST00000573600 J3QL48 77 aa15.63■□□□□ 0.09
CTDNEP1-208ENST00000573600 HRES1P13985 223 aa15.61■□□□□ 0.09
CTDNEP1-208ENST00000573600 XP32Q5T750 250 aa15.61■□□□□ 0.09
CTDNEP1-208ENST00000573600 RPL37P61927 97 aaKnown RBP15.58■□□□□ 0.08
CTDNEP1-208ENST00000573600 TPRXLQ17RH7 258 aa15.56■□□□□ 0.08
CTDNEP1-208ENST00000573600 ATP11AUNQ6ZP68 121 aa15.55■□□□□ 0.08
CTDNEP1-208ENST00000573600 SMIM26A0A096LP01 95 aa15.43■□□□□ 0.06
CTDNEP1-208ENST00000573600 SPINK7P58062 85 aa15.43■□□□□ 0.06
CTDNEP1-208ENST00000573600 DMAC1Q96GE9 116 aa15.43■□□□□ 0.06
CTDNEP1-208ENST00000573600 COA5Q86WW8 74 aa15.4■□□□□ 0.06
CTDNEP1-208ENST00000573600 ACYP2P14621 99 aa15.39■□□□□ 0.05
CTDNEP1-208ENST00000573600 C4orf26Q17RF5 130 aa15.26■□□□□ 0.03
CTDNEP1-208ENST00000573600 A8MUN3 132 aa15.25■□□□□ 0.03
CTDNEP1-208ENST00000573600 CHKB-CPT1BH3BT56 60 aa15.14■□□□□ 0.01
CTDNEP1-208ENST00000573600 MPLKIPQ8TAP9 179 aa15.12■□□□□ 0.01
CTDNEP1-208ENST00000573600 Q1T7F1 81 aa15.09■□□□□ 0.01
CTDNEP1-208ENST00000573600 COX6B2Q6YFQ2 88 aa15.09■□□□□ 0.01
CTDNEP1-208ENST00000573600 V9GYY9 64 aa15.06■□□□□ 0
CTDNEP1-208ENST00000573600 LPAP08519 4548 aa15.06■□□□□ 0
CTDNEP1-208ENST00000573600 KRTAP3-1Q9BYR8 98 aa15.04■□□□□ -0
CTDNEP1-208ENST00000573600 SEC61BP60468 96 aaKnown RBP15.03■□□□□ -0
CTDNEP1-208ENST00000573600 LRP2P98164 4655 aa15.02■□□□□ -0
CTDNEP1-208ENST00000573600 HERC1Q15751 4861 aa14.97□□□□□ -0.01
CTDNEP1-208ENST00000573600 LINC01558Q9Y6Z2 57 aa14.87□□□□□ -0.03
CTDNEP1-208ENST00000573600 SPTSSBQ8NFR3 76 aa14.83□□□□□ -0.04
CTDNEP1-208ENST00000573600 PSPHP1O15172 72 aa14.78□□□□□ -0.04
CTDNEP1-208ENST00000573600 RBM12B-AS1Q9P1G2 102 aa14.78□□□□□ -0.04
CTDNEP1-208ENST00000573600 PRR15LQ9BU68 103 aa14.75□□□□□ -0.05
CTDNEP1-208ENST00000573600 MUC17Q685J3 4493 aa14.7□□□□□ -0.06
CTDNEP1-208ENST00000573600 H1FX-AS1Q4G0G2 97 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms