RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 PRKDCP78527 4128 aaKnown RBP11.95□□□□□ -0.5
AC009041.2-204ENST00000568394 CIRBP-AS1Q8TBR5 109 aa11.92□□□□□ -0.5
AC009041.2-204ENST00000568394 APLNQ9ULZ1 77 aa11.92□□□□□ -0.5
AC009041.2-204ENST00000568394 A0A1B0GU69 56 aa11.91□□□□□ -0.5
AC009041.2-204ENST00000568394 SPRR1BP22528 89 aa11.9□□□□□ -0.5
AC009041.2-204ENST00000568394 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.9□□□□□ -0.5
AC009041.2-204ENST00000568394 C8orf87E5RJ46 101 aa11.9□□□□□ -0.5
AC009041.2-204ENST00000568394 Q5W150 140 aa11.89□□□□□ -0.51
AC009041.2-204ENST00000568394 Q96NJ1 140 aa11.89□□□□□ -0.51
AC009041.2-204ENST00000568394 ACYP2P14621 99 aa11.88□□□□□ -0.51
AC009041.2-204ENST00000568394 C14orf177Q52M58 125 aa11.88□□□□□ -0.51
AC009041.2-204ENST00000568394 NBDYA0A0U1RRE5 68 aa11.87□□□□□ -0.51
AC009041.2-204ENST00000568394 KMT2AQ03164 3969 aa11.86□□□□□ -0.51
AC009041.2-204ENST00000568394 Q6ZR54 194 aa11.86□□□□□ -0.51
AC009041.2-204ENST00000568394 STARD9Q9P2P6 4700 aa11.85□□□□□ -0.51
AC009041.2-204ENST00000568394 SPINK1P00995 79 aa11.81□□□□□ -0.52
AC009041.2-204ENST00000568394 C4orf48Q5BLP8 95 aa11.81□□□□□ -0.52
AC009041.2-204ENST00000568394 PLAC8Q9NZF1 115 aa11.8□□□□□ -0.52
AC009041.2-204ENST00000568394 IGKV2D-30A0A075B6S6 120 aa11.75□□□□□ -0.53
AC009041.2-204ENST00000568394 IGKV2-30P06310 120 aa11.75□□□□□ -0.53
AC009041.2-204ENST00000568394 MIR22HGQ0VDD5 57 aa11.73□□□□□ -0.53
AC009041.2-204ENST00000568394 LINC01554Q52M75 96 aa11.73□□□□□ -0.53
AC009041.2-204ENST00000568394 DNAH3Q8TD57 4116 aa11.73□□□□□ -0.53
AC009041.2-204ENST00000568394 PSORS1C2Q9UIG4 136 aa11.72□□□□□ -0.53
AC009041.2-204ENST00000568394 FRAS1Q86XX4 4008 aa11.71□□□□□ -0.54
AC009041.2-204ENST00000568394 ZNF706Q9Y5V0 76 aaPredicted RBP11.7□□□□□ -0.54
AC009041.2-204ENST00000568394 RTL8CO15255 209 aa11.7□□□□□ -0.54
AC009041.2-204ENST00000568394 H3BS24 57 aa11.69□□□□□ -0.54
AC009041.2-204ENST00000568394 WWC2-AS2Q96NR7 200 aa11.69□□□□□ -0.54
AC009041.2-204ENST00000568394 NUPR2A6NF83 97 aa11.68□□□□□ -0.54
AC009041.2-204ENST00000568394 IGLV5-52A0A0A0MRZ9 124 aa11.68□□□□□ -0.54
AC009041.2-204ENST00000568394 ASB16-AS1Q495Z4 193 aa11.68□□□□□ -0.54
AC009041.2-204ENST00000568394 CSAG1Q6PB30 78 aa11.66□□□□□ -0.54
AC009041.2-204ENST00000568394 FLG2Q5D862 2391 aaPredicted RBP11.66□□□□□ -0.54
AC009041.2-204ENST00000568394 A0A087WTM6 91 aa11.66□□□□□ -0.54
AC009041.2-204ENST00000568394 DNAH1Q9P2D7 4330 aa11.66□□□□□ -0.54
AC009041.2-204ENST00000568394 UQCR11O14957 56 aa11.65□□□□□ -0.54
AC009041.2-204ENST00000568394 KRTAP13-1Q8IUC0 172 aa11.64□□□□□ -0.55
AC009041.2-204ENST00000568394 ZNF861PO60384 105 aa11.58□□□□□ -0.56
AC009041.2-204ENST00000568394 C1orf134Q5TEV5 83 aa11.57□□□□□ -0.56
AC009041.2-204ENST00000568394 PLA2G1BP04054 148 aaKnown RBP11.56□□□□□ -0.56
AC009041.2-204ENST00000568394 SPACA4Q8TDM5 124 aa11.56□□□□□ -0.56
AC009041.2-204ENST00000568394 KRTAP10-2P60368 255 aa11.55□□□□□ -0.56
AC009041.2-204ENST00000568394 Q6ZRN7 208 aaPredicted RBP11.55□□□□□ -0.56
AC009041.2-204ENST00000568394 DMAC1Q96GE9 116 aa11.54□□□□□ -0.56
AC009041.2-204ENST00000568394 FAM229AH3BQW9 127 aa11.52□□□□□ -0.57
AC009041.2-204ENST00000568394 LINC00483Q53H64 154 aa11.5□□□□□ -0.57
AC009041.2-204ENST00000568394 DNAH11Q96DT5 4516 aa11.5□□□□□ -0.57
AC009041.2-204ENST00000568394 DNAH6Q9C0G6 4158 aa11.5□□□□□ -0.57
AC009041.2-204ENST00000568394 SPATA8Q6RVD6 105 aa11.5□□□□□ -0.57
AC009041.2-204ENST00000568394 Q8N1X5 172 aa11.49□□□□□ -0.57
AC009041.2-204ENST00000568394 SMR3BP02814 79 aaPredicted RBP11.47□□□□□ -0.57
AC009041.2-204ENST00000568394 VPS13DQ5THJ4 4388 aa11.46□□□□□ -0.57
AC009041.2-204ENST00000568394 DNAH2Q9P225 4427 aa11.44□□□□□ -0.58
AC009041.2-204ENST00000568394 DMBT1Q9UGM3 2413 aaPredicted RBP11.41□□□□□ -0.58
AC009041.2-204ENST00000568394 KRTAP13-3Q3SY46 172 aa11.4□□□□□ -0.58
AC009041.2-204ENST00000568394 CRIPTQ9P021 101 aa11.4□□□□□ -0.58
AC009041.2-204ENST00000568394 IGLV7-43P04211 117 aa11.37□□□□□ -0.59
AC009041.2-204ENST00000568394 DNAH8Q96JB1 4490 aa11.37□□□□□ -0.59
AC009041.2-204ENST00000568394 HYDINQ4G0P3 5121 aa11.36□□□□□ -0.59
AC009041.2-204ENST00000568394 DNAH17Q9UFH2 4485 aa11.33□□□□□ -0.6
AC009041.2-204ENST00000568394 HECTD4Q9Y4D8 3996 aa11.3□□□□□ -0.6
AC009041.2-204ENST00000568394 KRTAP10-1P60331 282 aa11.29□□□□□ -0.6
AC009041.2-204ENST00000568394 SSBP3-AS1Q7Z2R9 100 aa11.26□□□□□ -0.61
AC009041.2-204ENST00000568394 LRP1BQ9NZR2 4599 aa11.24□□□□□ -0.61
AC009041.2-204ENST00000568394 PKHD1P08F94 4074 aa11.17□□□□□ -0.62
AC009041.2-204ENST00000568394 FAT1Q14517 4588 aa11.13□□□□□ -0.63
AC009041.2-204ENST00000568394 KRTAP13-2Q52LG2 175 aa11.12□□□□□ -0.63
AC009041.2-204ENST00000568394 ALMS1Q8TCU4 4167 aa11.11□□□□□ -0.63
AC009041.2-204ENST00000568394 TYMSOSQ8TAI1 123 aa11.09□□□□□ -0.63
AC009041.2-204ENST00000568394 C9orf92A6NGG3 77 aa11.07□□□□□ -0.64
AC009041.2-204ENST00000568394 Q6ZSA8 131 aa11.06□□□□□ -0.64
AC009041.2-204ENST00000568394 A0A1B0GU33 70 aa11.06□□□□□ -0.64
AC009041.2-204ENST00000568394 FAT2Q9NYQ8 4349 aa11.05□□□□□ -0.64
AC009041.2-204ENST00000568394 H0YAA0 97 aa11.04□□□□□ -0.64
AC009041.2-204ENST00000568394 DNAH5Q8TE73 4624 aa11.04□□□□□ -0.64
AC009041.2-204ENST00000568394 KRTAP16-1A8MUX0 517 aa11.03□□□□□ -0.64
AC009041.2-204ENST00000568394 LINC00304Q8N9R0 145 aa11.02□□□□□ -0.64
AC009041.2-204ENST00000568394 KRTAP25-1Q3LHN0 102 aa11.02□□□□□ -0.65
AC009041.2-204ENST00000568394 DYNC2H1Q8NCM8 4307 aaKnown RBP11.02□□□□□ -0.65
AC009041.2-204ENST00000568394 K7ERS5 55 aa11□□□□□ -0.65
AC009041.2-204ENST00000568394 VPS13BQ7Z7G8 4022 aa10.99□□□□□ -0.65
AC009041.2-204ENST00000568394 ROMO1P60602 79 aa10.96□□□□□ -0.66
AC009041.2-204ENST00000568394 A8MUU9 505 aa10.94□□□□□ -0.66
AC009041.2-204ENST00000568394 A0A0D9SG42 100 aa10.91□□□□□ -0.66
AC009041.2-204ENST00000568394 KMT2CQ8NEZ4 4911 aaKnown RBP10.89□□□□□ -0.67
AC009041.2-204ENST00000568394 SPINT4Q6UDR6 99 aa10.88□□□□□ -0.67
AC009041.2-204ENST00000568394 H1FX-AS1Q4G0G2 97 aa10.86□□□□□ -0.67
AC009041.2-204ENST00000568394 MYCBP2O75592 4640 aa10.84□□□□□ -0.67
AC009041.2-204ENST00000568394 KRTAP1-4P0C5Y4 121 aa10.75□□□□□ -0.69
AC009041.2-204ENST00000568394 DYNC1H1Q14204 4646 aaKnown RBP10.74□□□□□ -0.69
AC009041.2-204ENST00000568394 SACSQ9NZJ4 4579 aa10.72□□□□□ -0.69
AC009041.2-204ENST00000568394 LRP1Q07954 4544 aaKnown RBP10.72□□□□□ -0.69
AC009041.2-204ENST00000568394 COX6B2Q6YFQ2 88 aa10.69□□□□□ -0.7
AC009041.2-204ENST00000568394 PKD1P98161 4303 aa10.67□□□□□ -0.7
AC009041.2-204ENST00000568394 KRTAP3-1Q9BYR8 98 aa10.64□□□□□ -0.71
AC009041.2-204ENST00000568394 P0C880 135 aa10.64□□□□□ -0.71
AC009041.2-204ENST00000568394 C10orf95Q9H7T3 257 aa10.63□□□□□ -0.71
AC009041.2-204ENST00000568394 FAT3Q8TDW7 4589 aa10.62□□□□□ -0.71
AC009041.2-204ENST00000568394 APOBP04114 4563 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms