RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 MRPL34Q9BQ48 92 aaKnown RBP8.49□□□□□ -1.05
CDH1-209ENST00000566510 A8MU10 97 aa8.48□□□□□ -1.05
CDH1-209ENST00000566510 MEGF8Q7Z7M0 2845 aa8.47□□□□□ -1.05
CDH1-209ENST00000566510 Q6ZR54 194 aa8.47□□□□□ -1.05
CDH1-209ENST00000566510 CIRBP-AS1Q8TBR5 109 aa8.47□□□□□ -1.05
CDH1-209ENST00000566510 PLAC8Q9NZF1 115 aa8.46□□□□□ -1.06
CDH1-209ENST00000566510 DNAH8Q96JB1 4490 aa8.45□□□□□ -1.06
CDH1-209ENST00000566510 PRKDCP78527 4128 aaKnown RBP8.45□□□□□ -1.06
CDH1-209ENST00000566510 VPS13DQ5THJ4 4388 aa8.45□□□□□ -1.06
CDH1-209ENST00000566510 SPAG11AQ6PDA7 123 aa8.44□□□□□ -1.06
CDH1-209ENST00000566510 FBN3Q75N90 2809 aa8.43□□□□□ -1.06
CDH1-209ENST00000566510 DNAH2Q9P225 4427 aa8.41□□□□□ -1.06
CDH1-209ENST00000566510 A6NED7 52 aa8.4□□□□□ -1.06
CDH1-209ENST00000566510 IGLV7-43P04211 117 aa8.4□□□□□ -1.06
CDH1-209ENST00000566510 C1orf134Q5TEV5 83 aa8.4□□□□□ -1.07
CDH1-209ENST00000566510 DNAH17Q9UFH2 4485 aa8.38□□□□□ -1.07
CDH1-209ENST00000566510 PMAIP1Q13794 54 aa8.38□□□□□ -1.07
CDH1-209ENST00000566510 SPTSSBQ8NFR3 76 aa8.38□□□□□ -1.07
CDH1-209ENST00000566510 HRES1P13985 223 aa8.38□□□□□ -1.07
CDH1-209ENST00000566510 Q5W150 140 aa8.37□□□□□ -1.07
CDH1-209ENST00000566510 LY6G6CO95867 125 aa8.36□□□□□ -1.07
CDH1-209ENST00000566510 Q75L30 129 aa8.36□□□□□ -1.07
CDH1-209ENST00000566510 LOC101927531A0A1B0GV80 90 aa8.35□□□□□ -1.07
CDH1-209ENST00000566510 DNAH6Q9C0G6 4158 aa8.34□□□□□ -1.07
CDH1-209ENST00000566510 LCA10Q71F78 164 aa8.32□□□□□ -1.08
CDH1-209ENST00000566510 RETNLBQ9BQ08 111 aa8.32□□□□□ -1.08
CDH1-209ENST00000566510 LINC01558Q9Y6Z2 57 aa8.31□□□□□ -1.08
CDH1-209ENST00000566510 PRR26Q8N8Z3 221 aa8.29□□□□□ -1.08
CDH1-209ENST00000566510 SSBP3-AS1Q7Z2R9 100 aa8.29□□□□□ -1.08
CDH1-209ENST00000566510 ALMS1Q8TCU4 4167 aa8.28□□□□□ -1.08
CDH1-209ENST00000566510 LINC00313P59037 77 aa8.27□□□□□ -1.08
CDH1-209ENST00000566510 KRTAP10-2P60368 255 aa8.27□□□□□ -1.09
CDH1-209ENST00000566510 KRTAP13-3Q3SY46 172 aa8.26□□□□□ -1.09
CDH1-209ENST00000566510 C8orf87E5RJ46 101 aa8.25□□□□□ -1.09
CDH1-209ENST00000566510 SPINK7P58062 85 aa8.24□□□□□ -1.09
CDH1-209ENST00000566510 ATP11AUNQ6ZP68 121 aa8.24□□□□□ -1.09
CDH1-209ENST00000566510 ACYP2P14621 99 aa8.23□□□□□ -1.09
CDH1-209ENST00000566510 CDC42SE1Q9NRR8 79 aa8.23□□□□□ -1.09
CDH1-209ENST00000566510 DNAH11Q96DT5 4516 aa8.23□□□□□ -1.09
CDH1-209ENST00000566510 SEC61GP60059 68 aa8.22□□□□□ -1.09
CDH1-209ENST00000566510 KRTAP13-2Q52LG2 175 aa8.2□□□□□ -1.1
CDH1-209ENST00000566510 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
CDH1-209ENST00000566510 DNAH5Q8TE73 4624 aa8.18□□□□□ -1.1
CDH1-209ENST00000566510 KRTAP10-1P60331 282 aa8.15□□□□□ -1.11
CDH1-209ENST00000566510 DMAC1Q96GE9 116 aa8.14□□□□□ -1.11
CDH1-209ENST00000566510 KTN1-AS1Q86SY8 53 aa8.14□□□□□ -1.11
CDH1-209ENST00000566510 IGKV2D-30A0A075B6S6 120 aa8.13□□□□□ -1.11
CDH1-209ENST00000566510 IGKV2-30P06310 120 aa8.13□□□□□ -1.11
CDH1-209ENST00000566510 DNHD1Q96M86 4753 aa8.12□□□□□ -1.11
CDH1-209ENST00000566510 LRP1BQ9NZR2 4599 aa8.12□□□□□ -1.11
CDH1-209ENST00000566510 A6NN06 94 aa8.11□□□□□ -1.11
CDH1-209ENST00000566510 VPS13BQ7Z7G8 4022 aa8.08□□□□□ -1.12
CDH1-209ENST00000566510 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
CDH1-209ENST00000566510 A0A1B0GU69 56 aa8.07□□□□□ -1.12
CDH1-209ENST00000566510 KRTAP16-1A8MUX0 517 aa8.07□□□□□ -1.12
CDH1-209ENST00000566510 Q6ZSA8 131 aa8.07□□□□□ -1.12
CDH1-209ENST00000566510 KRTAP1-4P0C5Y4 121 aa8.06□□□□□ -1.12
CDH1-209ENST00000566510 HYDINQ4G0P3 5121 aa8.05□□□□□ -1.12
CDH1-209ENST00000566510 PKD1P98161 4303 aa8.05□□□□□ -1.12
CDH1-209ENST00000566510 TYMSOSQ8TAI1 123 aa8.05□□□□□ -1.12
CDH1-209ENST00000566510 C7orf65Q6ZTY9 151 aa8.03□□□□□ -1.12
CDH1-209ENST00000566510 RBM12B-AS1Q9P1G2 102 aa7.99□□□□□ -1.13
CDH1-209ENST00000566510 FAT2Q9NYQ8 4349 aa7.99□□□□□ -1.13
CDH1-209ENST00000566510 SPINK1P00995 79 aa7.97□□□□□ -1.13
CDH1-209ENST00000566510 Q8N1X5 172 aa7.94□□□□□ -1.14
CDH1-209ENST00000566510 J3QL48 77 aa7.92□□□□□ -1.14
CDH1-209ENST00000566510 PKHD1P08F94 4074 aa7.92□□□□□ -1.14
CDH1-209ENST00000566510 UQCR11O14957 56 aa7.91□□□□□ -1.14
CDH1-209ENST00000566510 MIR22HGQ0VDD5 57 aa7.91□□□□□ -1.14
CDH1-209ENST00000566510 LINC00304Q8N9R0 145 aa7.91□□□□□ -1.14
CDH1-209ENST00000566510 SMR3BP02814 79 aaPredicted RBP7.88□□□□□ -1.15
CDH1-209ENST00000566510 SPATA8Q6RVD6 105 aa7.88□□□□□ -1.15
CDH1-209ENST00000566510 C9orf92A6NGG3 77 aa7.86□□□□□ -1.15
CDH1-209ENST00000566510 LCE2DQ5TA82 110 aaPredicted RBP7.86□□□□□ -1.15
CDH1-209ENST00000566510 PRAC1Q96KF2 57 aa7.85□□□□□ -1.15
CDH1-209ENST00000566510 ADM2Q7Z4H4 148 aa7.83□□□□□ -1.16
CDH1-209ENST00000566510 KRTAP3-3Q9BYR6 98 aa7.78□□□□□ -1.16
CDH1-209ENST00000566510 KRTAP3-2Q9BYR7 98 aa7.78□□□□□ -1.16
CDH1-209ENST00000566510 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
CDH1-209ENST00000566510 FAT1Q14517 4588 aa7.7□□□□□ -1.18
CDH1-209ENST00000566510 A8MUU9 505 aa7.69□□□□□ -1.18
CDH1-209ENST00000566510 C20orf166-AS1Q96NR2 134 aa7.69□□□□□ -1.18
CDH1-209ENST00000566510 DYNC1H1Q14204 4646 aaKnown RBP7.67□□□□□ -1.18
CDH1-209ENST00000566510 SACSQ9NZJ4 4579 aa7.66□□□□□ -1.18
CDH1-209ENST00000566510 KRTAP3-1Q9BYR8 98 aa7.65□□□□□ -1.18
CDH1-209ENST00000566510 H0YAA0 97 aa7.62□□□□□ -1.19
CDH1-209ENST00000566510 A0A1B0GU33 70 aa7.6□□□□□ -1.19
CDH1-209ENST00000566510 CSAG1Q6PB30 78 aa7.6□□□□□ -1.19
CDH1-209ENST00000566510 KRTAP10-4P60372 401 aaPredicted RBP7.59□□□□□ -1.19
CDH1-209ENST00000566510 PKHD1L1Q86WI1 4243 aa7.58□□□□□ -1.2
CDH1-209ENST00000566510 H3BS24 57 aa7.57□□□□□ -1.2
CDH1-209ENST00000566510 LINC01554Q52M75 96 aa7.57□□□□□ -1.2
CDH1-209ENST00000566510 FLG2Q5D862 2391 aaPredicted RBP7.57□□□□□ -1.2
CDH1-209ENST00000566510 APOBP04114 4563 aaKnown RBP7.56□□□□□ -1.2
CDH1-209ENST00000566510 A0A1B0GVY2 172 aa7.56□□□□□ -1.2
CDH1-209ENST00000566510 H1FX-AS1Q4G0G2 97 aa7.54□□□□□ -1.2
CDH1-209ENST00000566510 COX6B2Q6YFQ2 88 aa7.51□□□□□ -1.21
CDH1-209ENST00000566510 DMBT1Q9UGM3 2413 aaPredicted RBP7.51□□□□□ -1.21
CDH1-209ENST00000566510 LRP1Q07954 4544 aaKnown RBP7.45□□□□□ -1.22
CDH1-209ENST00000566510 K7ERS5 55 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms