RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 AKR1D1P51857 326 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 RBM3P98179 157 aaKnown RBP0.51□□□□□ -2.33
SMG1-212ENST00000566328 TPRXLQ17RH7 258 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 OCIAD2Q56VL3 154 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 SPAG11AQ6PDA7 123 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 LINC00575Q6W349 94 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 SCGB1D4Q6XE38 83 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 HIST3H2BBQ8N257 126 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 CLEC2BQ92478 149 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 Q96NJ1 140 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 HIST1H2BLQ99880 126 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 NAA38Q9BRA0 125 aaKnown RBP0.51□□□□□ -2.33
SMG1-212ENST00000566328 MIEN1Q9BRT3 115 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 PRO1933Q9H354 126 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 SPANXB1Q9NS25 103 aaPredicted RBP0.51□□□□□ -2.33
SMG1-212ENST00000566328 LAMTOR3Q9UHA4 124 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 PKIGQ9Y2B9 76 aa0.51□□□□□ -2.33
SMG1-212ENST00000566328 IGLV5-48A0A075B6I7 105 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 A0A087WSZ3 146 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 TRBV7-7A0A0K0K1E9 115 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 A0A1W2PNM2 257 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 hADV29S1A0JD25 119 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 LINC01549A6NIU2 74 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 LINC00587B1AMM8 73 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 H3BMG7 143 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 TIMM17BO60830 172 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 MT1FP04733 61 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 S100A6P06703 90 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 SPRR1BP22528 89 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 HINT1P49773 126 aaPredicted RBP0.5□□□□□ -2.33
SMG1-212ENST00000566328 FXYD2P54710 66 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 ELOF1P60002 83 aaKnown RBP0.5□□□□□ -2.33
SMG1-212ENST00000566328 RPL37P61927 97 aaKnown RBP0.5□□□□□ -2.33
SMG1-212ENST00000566328 JOSD1Q15040 202 aaPredicted RBP0.5□□□□□ -2.33
SMG1-212ENST00000566328 SPATA45Q537H7 98 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 COX6B2Q6YFQ2 88 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 Q6ZQY7 126 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 C2orf91Q6ZV80 131 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 FP248Q71RG6 208 aaPredicted RBP0.5□□□□□ -2.33
SMG1-212ENST00000566328 RAB37Q96AX2 223 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 SPANXDQ9BXN6 97 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 SNHG12Q9BXW3 62 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 NHP2Q9NX24 153 aaKnown RBP0.5□□□□□ -2.33
SMG1-212ENST00000566328 SPANXCQ9NY87 97 aa0.5□□□□□ -2.33
SMG1-212ENST00000566328 ZNF706Q9Y5V0 76 aaPredicted RBP0.5□□□□□ -2.33
SMG1-212ENST00000566328 IGHV6-1A0A0B4J1U7 121 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 TRAV13-2A0A0B4J235 113 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 TRBV7-6A0A0J9YX20 115 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 LST1O00453 97 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 MT2AP02795 61 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 BAALC-AS2P0C853 105 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 SCGB1C2P0DMR2 95 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 COX8AP10176 69 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 IFITM1P13164 125 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 S100A2P29034 98 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 PSMB2P49721 201 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 CTAG1AP78358 180 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 S100A12P80511 92 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 VAMP3Q15836 100 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 ATP11AUNQ6ZP68 121 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 SPANXA2-OT1Q8N9U9 137 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 VPS25Q9BRG1 176 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 LINC00472Q9H8W2 130 aa0.49□□□□□ -2.33
SMG1-212ENST00000566328 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
SMG1-212ENST00000566328 A0A087WVE0 104 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 FAM236DA0A1B0GTK5 79 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 HSBP1L1C9JCN9 74 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 TCL1BO95988 128 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 FAM236CP0DP71 79 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 HRES1P13985 223 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 SPINK7P58062 85 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 LINC00313P59037 77 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 CD164Q04900 197 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 BATFQ16520 125 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 PYY3Q5JQD4 70 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 BVES-AS1Q5T3Y7 98 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 TEN1Q86WV5 123 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 ANKRD29Q8N6D5 301 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 LIMD2Q9BT23 127 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 VAMP8Q9BV40 100 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 PRO1854Q9UHT4 67 aa0.48□□□□□ -2.33
SMG1-212ENST00000566328 MACF1Q9UPN3 7388 aaKnown RBP0.48□□□□□ -2.33
SMG1-212ENST00000566328 TRBV20-1A0A075B6N2 111 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 IGKV3D-7A0A0C4DH55 119 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 F8WEM9 126 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 H0YGX0 51 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 DLEU1O43261 78 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 CCKP06307 115 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 S100A1P23297 94 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 SEC61GP60059 68 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 RPS29P62273 56 aaKnown RBP0.47□□□□□ -2.33
SMG1-212ENST00000566328 C4orf26Q17RF5 130 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 LYRM7Q5U5X0 104 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 Q5XG85 94 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 Q6JHZ5 121 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 Q6ZQT0 140 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 C20orf166-AS1Q96NR2 134 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 SIGMAR1Q99720 223 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 C14orf132Q9NPU4 83 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 ORMDL1Q9P0S3 153 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms