RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 OTOGQ6ZRI0 2925 aa0.61□□□□□ -2.31
CNOT1-203ENST00000562046 NAV2Q8IVL1 2488 aa0.6□□□□□ -2.31
CNOT1-203ENST00000562046 COL6A5A8TX70 2615 aa0.6□□□□□ -2.31
CNOT1-203ENST00000562046 PIEZO1Q92508 2521 aa0.6□□□□□ -2.31
CNOT1-203ENST00000562046 CHD7Q9P2D1 2997 aa0.6□□□□□ -2.31
CNOT1-203ENST00000562046 HECTD1Q9ULT8 2610 aa0.6□□□□□ -2.31
CNOT1-203ENST00000562046 VPS13DQ5THJ4 4388 aa0.6□□□□□ -2.31
CNOT1-203ENST00000562046 FAT2Q9NYQ8 4349 aa0.6□□□□□ -2.31
CNOT1-203ENST00000562046 CREBBPQ92793 2442 aa0.59□□□□□ -2.31
CNOT1-203ENST00000562046 SRRM2Q9UQ35 2752 aaKnown RBP0.59□□□□□ -2.31
CNOT1-203ENST00000562046 U3KQA8 63 aa0.59□□□□□ -2.31
CNOT1-203ENST00000562046 DNAH11Q96DT5 4516 aa0.59□□□□□ -2.32
CNOT1-203ENST00000562046 CHD8Q9HCK8 2581 aa0.58□□□□□ -2.32
CNOT1-203ENST00000562046 UBR5O95071 2799 aaPredicted RBP0.58□□□□□ -2.32
CNOT1-203ENST00000562046 ACACAQ13085 2346 aa0.58□□□□□ -2.32
CNOT1-203ENST00000562046 NEBP20929 6669 aa0.58□□□□□ -2.32
CNOT1-203ENST00000562046 LYSTQ99698 3801 aa0.57□□□□□ -2.32
CNOT1-203ENST00000562046 SACSQ9NZJ4 4579 aa0.57□□□□□ -2.32
CNOT1-203ENST00000562046 K7EIM0 57 aa0.57□□□□□ -2.32
CNOT1-203ENST00000562046 SYNE2Q8WXH0 6885 aaKnown RBP0.57□□□□□ -2.32
CNOT1-203ENST00000562046 DMBT1Q9UGM3 2413 aaPredicted RBP0.56□□□□□ -2.32
CNOT1-203ENST00000562046 TENM2Q9NT68 2774 aa0.56□□□□□ -2.32
CNOT1-203ENST00000562046 C9orf92A6NGG3 77 aa0.56□□□□□ -2.32
CNOT1-203ENST00000562046 TNP1P09430 55 aa0.56□□□□□ -2.32
CNOT1-203ENST00000562046 SETD2Q9BYW2 2564 aaPredicted RBP0.55□□□□□ -2.32
CNOT1-203ENST00000562046 CCDC168Q8NDH2 2452 aa0.55□□□□□ -2.32
CNOT1-203ENST00000562046 PDZD2O15018 2839 aa0.55□□□□□ -2.32
CNOT1-203ENST00000562046 KMT2AQ03164 3969 aa0.55□□□□□ -2.32
CNOT1-203ENST00000562046 APC2O95996 2303 aa0.55□□□□□ -2.32
CNOT1-203ENST00000562046 HIVEP3Q5T1R4 2406 aa0.55□□□□□ -2.32
CNOT1-203ENST00000562046 MYCBP2O75592 4640 aa0.55□□□□□ -2.32
CNOT1-203ENST00000562046 FSIP2Q5CZC0 6907 aa0.54□□□□□ -2.32
CNOT1-203ENST00000562046 H3BNG1 76 aa0.54□□□□□ -2.32
CNOT1-203ENST00000562046 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
CNOT1-203ENST00000562046 TMEM167AQ8TBQ9 72 aa0.54□□□□□ -2.32
CNOT1-203ENST00000562046 VPS13BQ7Z7G8 4022 aa0.54□□□□□ -2.32
CNOT1-203ENST00000562046 HUWE1Q7Z6Z7 4374 aaKnown RBP0.53□□□□□ -2.32
CNOT1-203ENST00000562046 APCP25054 2843 aa0.53□□□□□ -2.32
CNOT1-203ENST00000562046 ACANP16112 2415 aa0.53□□□□□ -2.32
CNOT1-203ENST00000562046 MUC5ACP98088 5654 aa0.53□□□□□ -2.33
CNOT1-203ENST00000562046 MAP1BP46821 2468 aaKnown RBP0.53□□□□□ -2.33
CNOT1-203ENST00000562046 SPTBN4Q9H254 2564 aa0.51□□□□□ -2.33
CNOT1-203ENST00000562046 STAB1Q9NY15 2570 aa0.51□□□□□ -2.33
CNOT1-203ENST00000562046 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
CNOT1-203ENST00000562046 USP24Q9UPU5 2620 aa0.51□□□□□ -2.33
CNOT1-203ENST00000562046 DNAH2Q9P225 4427 aa0.5□□□□□ -2.33
CNOT1-203ENST00000562046 DEFB110Q30KQ9 67 aa0.5□□□□□ -2.33
CNOT1-203ENST00000562046 HSPG2P98160 4391 aa0.5□□□□□ -2.33
CNOT1-203ENST00000562046 DYNC2H1Q8NCM8 4307 aaKnown RBP0.5□□□□□ -2.33
CNOT1-203ENST00000562046 ANK3Q12955 4377 aaKnown RBP0.5□□□□□ -2.33
CNOT1-203ENST00000562046 ZZEF1O43149 2961 aa0.49□□□□□ -2.33
CNOT1-203ENST00000562046 PKD1P98161 4303 aa0.49□□□□□ -2.33
CNOT1-203ENST00000562046 GCN1Q92616 2671 aaKnown RBP0.49□□□□□ -2.33
CNOT1-203ENST00000562046 SPRR2DP22532 72 aa0.49□□□□□ -2.33
CNOT1-203ENST00000562046 RPL39P5Q59GN2 51 aa0.49□□□□□ -2.33
CNOT1-203ENST00000562046 MDN1Q9NU22 5596 aa0.49□□□□□ -2.33
CNOT1-203ENST00000562046 DNAH3Q8TD57 4116 aa0.49□□□□□ -2.33
CNOT1-203ENST00000562046 PTPN13Q12923 2485 aa0.48□□□□□ -2.33
CNOT1-203ENST00000562046 NBPF19A0A087WUL8 3843 aa0.48□□□□□ -2.33
CNOT1-203ENST00000562046 NF1P21359 2839 aa0.48□□□□□ -2.33
CNOT1-203ENST00000562046 DNAH8Q96JB1 4490 aa0.48□□□□□ -2.33
CNOT1-203ENST00000562046 FRYQ5TBA9 3013 aa0.48□□□□□ -2.33
CNOT1-203ENST00000562046 KMT2DO14686 5537 aa0.48□□□□□ -2.33
CNOT1-203ENST00000562046 SPART-AS1P0CW21 52 aa0.48□□□□□ -2.33
CNOT1-203ENST00000562046 PKHD1L1Q86WI1 4243 aa0.48□□□□□ -2.33
CNOT1-203ENST00000562046 DCHS2Q6V1P9 2916 aa0.48□□□□□ -2.33
CNOT1-203ENST00000562046 LRP1Q07954 4544 aaKnown RBP0.48□□□□□ -2.33
CNOT1-203ENST00000562046 ZFYVE26Q68DK2 2539 aa0.47□□□□□ -2.33
CNOT1-203ENST00000562046 COL6A3P12111 3177 aa0.47□□□□□ -2.33
CNOT1-203ENST00000562046 COL12A1Q99715 3063 aa0.47□□□□□ -2.33
CNOT1-203ENST00000562046 FLNCQ14315 2725 aa0.47□□□□□ -2.33
CNOT1-203ENST00000562046 MGAQ8IWI9 3026 aa0.47□□□□□ -2.33
CNOT1-203ENST00000562046 SYNE1Q8NF91 8797 aaKnown RBP0.47□□□□□ -2.33
CNOT1-203ENST00000562046 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
CNOT1-203ENST00000562046 PCLOQ9Y6V0 5065 aa0.47□□□□□ -2.33
CNOT1-203ENST00000562046 MTORP42345 2549 aa0.47□□□□□ -2.33
CNOT1-203ENST00000562046 RIF1Q5UIP0 2472 aaKnown RBP0.47□□□□□ -2.33
CNOT1-203ENST00000562046 CRYBG3Q68DQ2 2970 aa0.47□□□□□ -2.33
CNOT1-203ENST00000562046 SPENQ96T58 3664 aaKnown RBP0.46□□□□□ -2.34
CNOT1-203ENST00000562046 CUBNO60494 3623 aa0.46□□□□□ -2.34
CNOT1-203ENST00000562046 SPRR2BP35325 72 aa0.46□□□□□ -2.34
CNOT1-203ENST00000562046 KRTAP8-1Q8IUC2 63 aa0.46□□□□□ -2.34
CNOT1-203ENST00000562046 COL7A1Q02388 2944 aa0.46□□□□□ -2.34
CNOT1-203ENST00000562046 FAM186AA6NE01 2351 aa0.46□□□□□ -2.34
CNOT1-203ENST00000562046 TACC2O95359 2948 aa0.45□□□□□ -2.34
CNOT1-203ENST00000562046 DEFB108AA8MXU0 73 aa0.45□□□□□ -2.34
CNOT1-203ENST00000562046 SETXQ7Z333 2677 aaKnown RBP0.45□□□□□ -2.34
CNOT1-203ENST00000562046 DMXL1Q9Y485 3027 aa0.45□□□□□ -2.34
CNOT1-203ENST00000562046 DNAH7Q8WXX0 4024 aa0.45□□□□□ -2.34
CNOT1-203ENST00000562046 HECTD4Q9Y4D8 3996 aa0.45□□□□□ -2.34
CNOT1-203ENST00000562046 ZFHX4Q86UP3 3567 aa0.45□□□□□ -2.34
CNOT1-203ENST00000562046 RANBP2P49792 3224 aaKnown RBP0.44□□□□□ -2.34
CNOT1-203ENST00000562046 SONP18583 2426 aaKnown RBP0.44□□□□□ -2.34
CNOT1-203ENST00000562046 MUC2Q02817 5179 aa0.44□□□□□ -2.34
CNOT1-203ENST00000562046 ACACBO00763 2458 aa0.44□□□□□ -2.34
CNOT1-203ENST00000562046 CELSR3Q9NYQ7 3312 aa0.44□□□□□ -2.34
CNOT1-203ENST00000562046 LPAP08519 4548 aa0.44□□□□□ -2.34
CNOT1-203ENST00000562046 EPG5Q9HCE0 2579 aa0.44□□□□□ -2.34
CNOT1-203ENST00000562046 LRRK2Q5S007 2527 aa0.43□□□□□ -2.34
CNOT1-203ENST00000562046 ANKHD1Q8IWZ3 2542 aaKnown RBP0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms