RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 ITPR1Q14643 2758 aa6.75□□□□□ -1.33
SYNM-203ENST00000560674 KMT2BQ9UMN6 2715 aaPredicted RBP6.73□□□□□ -1.33
SYNM-203ENST00000560674 APCP25054 2843 aa6.73□□□□□ -1.33
SYNM-203ENST00000560674 KRTAP1-4P0C5Y4 121 aa6.73□□□□□ -1.33
SYNM-203ENST00000560674 H0YAA0 97 aa6.72□□□□□ -1.33
SYNM-203ENST00000560674 KALRNO60229 2985 aa6.72□□□□□ -1.33
SYNM-203ENST00000560674 LAMA1P25391 3075 aa6.71□□□□□ -1.34
SYNM-203ENST00000560674 XP32Q5T750 250 aa6.71□□□□□ -1.34
SYNM-203ENST00000560674 UTP20O75691 2785 aaKnown RBP6.66□□□□□ -1.34
SYNM-203ENST00000560674 KRTAP10-8P60410 259 aa6.65□□□□□ -1.34
SYNM-203ENST00000560674 TNRC18O15417 2968 aaPredicted RBP6.65□□□□□ -1.34
SYNM-203ENST00000560674 P0C880 135 aa6.65□□□□□ -1.35
SYNM-203ENST00000560674 HIVEP1P15822 2718 aa6.61□□□□□ -1.35
SYNM-203ENST00000560674 WDFY3Q8IZQ1 3526 aa6.61□□□□□ -1.35
SYNM-203ENST00000560674 TACC2O95359 2948 aa6.61□□□□□ -1.35
SYNM-203ENST00000560674 KRTAP21-3Q3LHN1 58 aa6.6□□□□□ -1.35
SYNM-203ENST00000560674 ASH1LQ9NR48 2969 aaKnown RBP6.59□□□□□ -1.35
SYNM-203ENST00000560674 A0A1B0GVY2 172 aa6.59□□□□□ -1.35
SYNM-203ENST00000560674 SPEGQ15772 3267 aa6.59□□□□□ -1.36
SYNM-203ENST00000560674 LRBAP50851 2863 aa6.57□□□□□ -1.36
SYNM-203ENST00000560674 DMXL2Q8TDJ6 3036 aa6.57□□□□□ -1.36
SYNM-203ENST00000560674 MYO15AQ9UKN7 3530 aa6.57□□□□□ -1.36
SYNM-203ENST00000560674 ATMQ13315 3056 aa6.55□□□□□ -1.36
SYNM-203ENST00000560674 TPRXLQ17RH7 258 aa6.55□□□□□ -1.36
SYNM-203ENST00000560674 FLNCQ14315 2725 aa6.54□□□□□ -1.36
SYNM-203ENST00000560674 FRYLO94915 3013 aa6.52□□□□□ -1.37
SYNM-203ENST00000560674 NIPBLQ6KC79 2804 aaeCLIP6.51□□□□□ -1.37
SYNM-203ENST00000560674 NBEAQ8NFP9 2946 aa6.5□□□□□ -1.37
SYNM-203ENST00000560674 COL12A1Q99715 3063 aa6.5□□□□□ -1.37
SYNM-203ENST00000560674 ZZEF1O43149 2961 aa6.49□□□□□ -1.37
SYNM-203ENST00000560674 ADGRG4Q8IZF6 3080 aa6.47□□□□□ -1.37
SYNM-203ENST00000560674 EYSQ5T1H1 3165 aa6.46□□□□□ -1.37
SYNM-203ENST00000560674 KRTAP13-3Q3SY46 172 aa6.46□□□□□ -1.38
SYNM-203ENST00000560674 CFAP47Q6ZTR5 3102 aa6.45□□□□□ -1.38
SYNM-203ENST00000560674 BOD1L1Q8NFC6 3051 aa6.45□□□□□ -1.38
SYNM-203ENST00000560674 TENM4Q6N022 2769 aa6.44□□□□□ -1.38
SYNM-203ENST00000560674 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
SYNM-203ENST00000560674 CELSR2Q9HCU4 2923 aa6.43□□□□□ -1.38
SYNM-203ENST00000560674 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
SYNM-203ENST00000560674 CRYBG3Q68DQ2 2970 aa6.41□□□□□ -1.38
SYNM-203ENST00000560674 DCHS1Q96JQ0 3298 aa6.38□□□□□ -1.39
SYNM-203ENST00000560674 BSNQ9UPA5 3926 aa6.37□□□□□ -1.39
SYNM-203ENST00000560674 DMDP11532 3685 aa6.36□□□□□ -1.39
SYNM-203ENST00000560674 DCHS2Q6V1P9 2916 aa6.35□□□□□ -1.39
SYNM-203ENST00000560674 HRNRQ86YZ3 2850 aaPredicted RBP6.35□□□□□ -1.39
SYNM-203ENST00000560674 ASPMQ8IZT6 3477 aa6.34□□□□□ -1.4
SYNM-203ENST00000560674 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
SYNM-203ENST00000560674 ANK3Q12955 4377 aaKnown RBP6.32□□□□□ -1.4
SYNM-203ENST00000560674 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
SYNM-203ENST00000560674 ZFHX4Q86UP3 3567 aa6.3□□□□□ -1.4
SYNM-203ENST00000560674 CSMD1Q96PZ7 3565 aa6.26□□□□□ -1.41
SYNM-203ENST00000560674 ZANQ9Y493 2812 aa6.25□□□□□ -1.41
SYNM-203ENST00000560674 TGP01266 2768 aa6.25□□□□□ -1.41
SYNM-203ENST00000560674 SMG1Q96Q15 3661 aaKnown RBP6.23□□□□□ -1.41
SYNM-203ENST00000560674 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.42
SYNM-203ENST00000560674 AKAP9Q99996 3911 aa6.21□□□□□ -1.42
SYNM-203ENST00000560674 TENM3Q9P273 2699 aa6.2□□□□□ -1.42
SYNM-203ENST00000560674 SPENQ96T58 3664 aaKnown RBP6.2□□□□□ -1.42
SYNM-203ENST00000560674 TENM1Q9UKZ4 2725 aa6.2□□□□□ -1.42
SYNM-203ENST00000560674 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
SYNM-203ENST00000560674 LOC400499M0QZD8 3231 aa6.16□□□□□ -1.42
SYNM-203ENST00000560674 DMXL1Q9Y485 3027 aa6.14□□□□□ -1.43
SYNM-203ENST00000560674 NF1P21359 2839 aa6.14□□□□□ -1.43
SYNM-203ENST00000560674 FBN2P35556 2912 aa6.14□□□□□ -1.43
SYNM-203ENST00000560674 TENM2Q9NT68 2774 aa6.12□□□□□ -1.43
SYNM-203ENST00000560674 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
SYNM-203ENST00000560674 LAMA5O15230 3695 aa6.09□□□□□ -1.43
SYNM-203ENST00000560674 CELSR1Q9NYQ6 3014 aa6.06□□□□□ -1.44
SYNM-203ENST00000560674 RELNP78509 3460 aa6.04□□□□□ -1.44
SYNM-203ENST00000560674 HUWE1Q7Z6Z7 4374 aaKnown RBP5.96□□□□□ -1.45
SYNM-203ENST00000560674 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.46
SYNM-203ENST00000560674 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
SYNM-203ENST00000560674 SVEP1Q4LDE5 3571 aa5.94□□□□□ -1.46
SYNM-203ENST00000560674 ZFHX3Q15911 3703 aa5.91□□□□□ -1.46
SYNM-203ENST00000560674 PDZD2O15018 2839 aa5.91□□□□□ -1.46
SYNM-203ENST00000560674 MXRA5Q9NR99 2828 aa5.9□□□□□ -1.47
SYNM-203ENST00000560674 ALMS1Q8TCU4 4167 aa5.89□□□□□ -1.47
SYNM-203ENST00000560674 PKD1L1Q8TDX9 2849 aa5.87□□□□□ -1.47
SYNM-203ENST00000560674 NBPF19A0A087WUL8 3843 aa5.87□□□□□ -1.47
SYNM-203ENST00000560674 VPS13CQ709C8 3753 aa5.83□□□□□ -1.48
SYNM-203ENST00000560674 VWFP04275 2813 aa5.82□□□□□ -1.48
SYNM-203ENST00000560674 INE1O15225 51 aa5.74□□□□□ -1.49
SYNM-203ENST00000560674 KRTAP3-3Q9BYR6 98 aa5.74□□□□□ -1.49
SYNM-203ENST00000560674 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
SYNM-203ENST00000560674 DNAH3Q8TD57 4116 aa5.73□□□□□ -1.49
SYNM-203ENST00000560674 DNAH1Q9P2D7 4330 aa5.72□□□□□ -1.49
SYNM-203ENST00000560674 MUC3AQ02505 3323 aa5.67□□□□□ -1.5
SYNM-203ENST00000560674 CMYA5Q8N3K9 4069 aa5.67□□□□□ -1.5
SYNM-203ENST00000560674 MT1HL1P0DM35 61 aa5.66□□□□□ -1.5
SYNM-203ENST00000560674 KRTAP10-12P60413 245 aa5.65□□□□□ -1.51
SYNM-203ENST00000560674 DNAH9Q9NYC9 4486 aa5.61□□□□□ -1.51
SYNM-203ENST00000560674 FBN3Q75N90 2809 aa5.61□□□□□ -1.51
SYNM-203ENST00000560674 CSMD2Q7Z408 3487 aa5.61□□□□□ -1.51
SYNM-203ENST00000560674 CUBNO60494 3623 aa5.6□□□□□ -1.51
SYNM-203ENST00000560674 ANK2Q01484 3957 aa5.6□□□□□ -1.51
SYNM-203ENST00000560674 DNAH10Q8IVF4 4471 aa5.59□□□□□ -1.51
SYNM-203ENST00000560674 MEGF8Q7Z7M0 2845 aa5.59□□□□□ -1.51
SYNM-203ENST00000560674 DYNC2H1Q8NCM8 4307 aaKnown RBP5.57□□□□□ -1.52
SYNM-203ENST00000560674 FBN1P35555 2871 aaKnown RBP5.55□□□□□ -1.52
SYNM-203ENST00000560674 ZNF469Q96JG9 3925 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms