RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 ALMS1Q8TCU4 4167 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 A0A1B0GUT8 65 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 SPRR2EP22531 72 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 SPRR2DP22532 72 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 SPRR2BP35325 72 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 SPRR2AP35326 72 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 PIGYQ3MUY2 71 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 CNFNQ9BYD5 112 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 LTN1O94822 1766 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 COL14A1Q05707 1796 aaKnown RBP0.36□□□□□ -2.35
USP8-211ENST00000560527 KIF1AQ12756 1690 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 FAT2Q9NYQ8 4349 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 ABCC8Q09428 1581 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 NRAPQ86VF7 1730 aa0.35□□□□□ -2.35
USP8-211ENST00000560527 PKD1P98161 4303 aa0.35□□□□□ -2.35
USP8-211ENST00000560527 CCDC180Q9P1Z9 1646 aa0.35□□□□□ -2.35
USP8-211ENST00000560527 DNAH7Q8WXX0 4024 aa0.35□□□□□ -2.35
USP8-211ENST00000560527 HRNRQ86YZ3 2850 aaPredicted RBP0.35□□□□□ -2.35
USP8-211ENST00000560527 TRAV21A0A0B4J279 112 aa0.35□□□□□ -2.35
USP8-211ENST00000560527 Q8IZM0 81 aa0.35□□□□□ -2.35
USP8-211ENST00000560527 WFDC9Q8NEX5 89 aa0.35□□□□□ -2.35
USP8-211ENST00000560527 C18orf32Q8TCD1 76 aa0.35□□□□□ -2.35
USP8-211ENST00000560527 GAFA1Q96PS6 74 aa0.35□□□□□ -2.35
USP8-211ENST00000560527 RRBP1Q9P2E9 1410 aaKnown RBP0.35□□□□□ -2.35
USP8-211ENST00000560527 URB1O60287 2271 aaKnown RBP0.35□□□□□ -2.35
USP8-211ENST00000560527 LRRC37AA6NMS7 1700 aa0.35□□□□□ -2.35
USP8-211ENST00000560527 ITSN1Q15811 1721 aa0.35□□□□□ -2.35
USP8-211ENST00000560527 PLCE1Q9P212 2302 aa0.35□□□□□ -2.35
USP8-211ENST00000560527 RGPD8O14715 1765 aaPredicted RBP0.34□□□□□ -2.35
USP8-211ENST00000560527 RGPD5Q99666 1765 aa0.34□□□□□ -2.35
USP8-211ENST00000560527 TNCP24821 2201 aa0.34□□□□□ -2.35
USP8-211ENST00000560527 SPTBN1Q01082 2364 aaKnown RBP0.34□□□□□ -2.35
USP8-211ENST00000560527 TSC2P49815 1807 aa0.34□□□□□ -2.35
USP8-211ENST00000560527 A0A087WXM4 84 aa0.34□□□□□ -2.36
USP8-211ENST00000560527 K7EQZ3 153 aa0.34□□□□□ -2.36
USP8-211ENST00000560527 SMIM13P0DJ93 91 aa0.34□□□□□ -2.36
USP8-211ENST00000560527 DEFA5Q01523 94 aa0.34□□□□□ -2.36
USP8-211ENST00000560527 RICTORQ6R327 1708 aa0.34□□□□□ -2.36
USP8-211ENST00000560527 DOT1LQ8TEK3 1739 aa0.34□□□□□ -2.36
USP8-211ENST00000560527 INO80Q9ULG1 1556 aaPredicted RBP0.34□□□□□ -2.36
USP8-211ENST00000560527 USF3Q68DE3 2245 aa0.34□□□□□ -2.36
USP8-211ENST00000560527 EIF2AK4Q9P2K8 1649 aaKnown RBP0.34□□□□□ -2.36
USP8-211ENST00000560527 TIAM2Q8IVF5 1701 aa0.33□□□□□ -2.36
USP8-211ENST00000560527 MYO5CQ9NQX4 1742 aa0.33□□□□□ -2.36
USP8-211ENST00000560527 CFDP00746 253 aaPredicted RBP0.33□□□□□ -2.36
USP8-211ENST00000560527 IFI6P09912 130 aa0.33□□□□□ -2.36
USP8-211ENST00000560527 COX7BP24311 80 aa0.33□□□□□ -2.36
USP8-211ENST00000560527 DEFB121Q5J5C9 76 aa0.33□□□□□ -2.36
USP8-211ENST00000560527 SPINK6Q6UWN8 80 aa0.33□□□□□ -2.36
USP8-211ENST00000560527 SMCO4Q9NRQ5 59 aa0.33□□□□□ -2.36
USP8-211ENST00000560527 PIK3C2BO00750 1634 aa0.33□□□□□ -2.36
USP8-211ENST00000560527 IQGAP3Q86VI3 1631 aa0.33□□□□□ -2.36
USP8-211ENST00000560527 ANK3Q12955 4377 aaKnown RBP0.33□□□□□ -2.36
USP8-211ENST00000560527 LMO7Q8WWI1 1683 aa0.33□□□□□ -2.36
USP8-211ENST00000560527 GOLGA4Q13439 2230 aaKnown RBP0.33□□□□□ -2.36
USP8-211ENST00000560527 LY75O60449 1722 aa0.33□□□□□ -2.36
USP8-211ENST00000560527 ARFGEF2Q9Y6D5 1785 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 ANKARQ7Z5J8 1434 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 SPTY2D1-AS1A0A0U1RR47 76 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 CPSF4LA6NMK7 179 aaKnown RBP0.32□□□□□ -2.36
USP8-211ENST00000560527 H3BVH4 76 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 I3L3M4 83 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 COX6B1P14854 86 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 SPRR1BP22528 89 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 Q5VSD8 79 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 USMG5Q96IX5 58 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 FXYD6Q9H0Q3 95 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 APLNQ9ULZ1 77 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 MROH2AA6NES4 1674 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 QSER1Q2KHR3 1735 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 TOP2AP11388 1531 aaKnown RBP0.32□□□□□ -2.36
USP8-211ENST00000560527 CFAP74Q9C0B2 1584 aa0.32□□□□□ -2.36
USP8-211ENST00000560527 DNAH5Q8TE73 4624 aa0.31□□□□□ -2.36
USP8-211ENST00000560527 PTPN23Q9H3S7 1636 aa0.31□□□□□ -2.36
USP8-211ENST00000560527 UMAD1C9J7I0 102 aa0.31□□□□□ -2.36
USP8-211ENST00000560527 PDCD5O14737 125 aa0.31□□□□□ -2.36
USP8-211ENST00000560527 SMR3BP02814 79 aaPredicted RBP0.31□□□□□ -2.36
USP8-211ENST00000560527 SPRR1AP35321 89 aa0.31□□□□□ -2.36
USP8-211ENST00000560527 IFI27P40305 119 aaPredicted RBP0.31□□□□□ -2.36
USP8-211ENST00000560527 KLK9Q2XQG4 91 aa0.31□□□□□ -2.36
USP8-211ENST00000560527 ABCC6O95255 1503 aa0.31□□□□□ -2.36
USP8-211ENST00000560527 BCORQ6W2J9 1755 aa0.31□□□□□ -2.36
USP8-211ENST00000560527 SYNE1Q8NF91 8797 aaKnown RBP0.31□□□□□ -2.36
USP8-211ENST00000560527 ALS2Q96Q42 1657 aa0.3□□□□□ -2.36
USP8-211ENST00000560527 HUWE1Q7Z6Z7 4374 aaKnown RBP0.3□□□□□ -2.36
USP8-211ENST00000560527 NDUFB1O75438 58 aa0.3□□□□□ -2.36
USP8-211ENST00000560527 COX8AP10176 69 aa0.3□□□□□ -2.36
USP8-211ENST00000560527 NREPQ16612 68 aa0.3□□□□□ -2.36
USP8-211ENST00000560527 Q5BKY6 102 aa0.3□□□□□ -2.36
USP8-211ENST00000560527 ATP5EP2Q5VTU8 51 aa0.3□□□□□ -2.36
USP8-211ENST00000560527 DEFB105AQ8NG35 78 aa0.3□□□□□ -2.36
USP8-211ENST00000560527 LYSTQ99698 3801 aa0.3□□□□□ -2.36
USP8-211ENST00000560527 MRPL34Q9BQ48 92 aaKnown RBP0.3□□□□□ -2.36
USP8-211ENST00000560527 HILPDAQ9Y5L2 63 aa0.3□□□□□ -2.36
USP8-211ENST00000560527 KNL1Q8NG31 2342 aa0.3□□□□□ -2.36
USP8-211ENST00000560527 CCDC141Q6ZP82 1450 aa0.29□□□□□ -2.36
USP8-211ENST00000560527 DNAH10Q8IVF4 4471 aa0.29□□□□□ -2.36
USP8-211ENST00000560527 LPAP08519 4548 aa0.29□□□□□ -2.36
USP8-211ENST00000560527 PKHD1L1Q86WI1 4243 aa0.29□□□□□ -2.36
USP8-211ENST00000560527 APOBP04114 4563 aaKnown RBP0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms