RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 FBN1P35555 2871 aaKnown RBP9.42□□□□□ -0.9
HMBOX1-212ENST00000558662 SPACA4Q8TDM5 124 aa9.42□□□□□ -0.9
HMBOX1-212ENST00000558662 PKD1L1Q8TDX9 2849 aa9.38□□□□□ -0.91
HMBOX1-212ENST00000558662 SSBP3-AS1Q7Z2R9 100 aa9.37□□□□□ -0.91
HMBOX1-212ENST00000558662 IGLV5-52A0A0A0MRZ9 124 aa9.37□□□□□ -0.91
HMBOX1-212ENST00000558662 KRTAP25-1Q3LHN0 102 aa9.37□□□□□ -0.91
HMBOX1-212ENST00000558662 C1orf134Q5TEV5 83 aa9.37□□□□□ -0.91
HMBOX1-212ENST00000558662 MAST4O15021 2626 aa9.36□□□□□ -0.91
HMBOX1-212ENST00000558662 IGKV2D-30A0A075B6S6 120 aa9.36□□□□□ -0.91
HMBOX1-212ENST00000558662 SPINK6Q6UWN8 80 aa9.36□□□□□ -0.91
HMBOX1-212ENST00000558662 LY6G6CO95867 125 aa9.35□□□□□ -0.91
HMBOX1-212ENST00000558662 UBE2DNLQ8IWF7 75 aa9.35□□□□□ -0.91
HMBOX1-212ENST00000558662 ROMO1P60602 79 aa9.32□□□□□ -0.92
HMBOX1-212ENST00000558662 A8MUU9 505 aa9.32□□□□□ -0.92
HMBOX1-212ENST00000558662 TRRAPQ9Y4A5 3859 aa9.3□□□□□ -0.92
HMBOX1-212ENST00000558662 PANO1I0J062 215 aa9.3□□□□□ -0.92
HMBOX1-212ENST00000558662 PSORS1C2Q9UIG4 136 aa9.29□□□□□ -0.92
HMBOX1-212ENST00000558662 STAB1Q9NY15 2570 aa9.28□□□□□ -0.92
HMBOX1-212ENST00000558662 TENM3Q9P273 2699 aa9.28□□□□□ -0.92
HMBOX1-212ENST00000558662 CMYA5Q8N3K9 4069 aa9.27□□□□□ -0.92
HMBOX1-212ENST00000558662 SRRM2Q9UQ35 2752 aaKnown RBP9.26□□□□□ -0.93
HMBOX1-212ENST00000558662 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.26□□□□□ -0.93
HMBOX1-212ENST00000558662 APLNQ9ULZ1 77 aa9.25□□□□□ -0.93
HMBOX1-212ENST00000558662 ANK2Q01484 3957 aa9.24□□□□□ -0.93
HMBOX1-212ENST00000558662 DNAH3Q8TD57 4116 aa9.24□□□□□ -0.93
HMBOX1-212ENST00000558662 COL6A5A8TX70 2615 aa9.22□□□□□ -0.93
HMBOX1-212ENST00000558662 Q6ZRN7 208 aaPredicted RBP9.22□□□□□ -0.93
HMBOX1-212ENST00000558662 CIRBP-AS1Q8TBR5 109 aa9.22□□□□□ -0.93
HMBOX1-212ENST00000558662 NBDYA0A0U1RRE5 68 aa9.22□□□□□ -0.93
HMBOX1-212ENST00000558662 KRTAP16-1A8MUX0 517 aa9.22□□□□□ -0.93
HMBOX1-212ENST00000558662 ANAPC11Q9NYG5 84 aa9.19□□□□□ -0.94
HMBOX1-212ENST00000558662 LINC00304Q8N9R0 145 aa9.18□□□□□ -0.94
HMBOX1-212ENST00000558662 H0YAA0 97 aa9.14□□□□□ -0.95
HMBOX1-212ENST00000558662 Q6ZSA8 131 aa9.14□□□□□ -0.95
HMBOX1-212ENST00000558662 K7ERS5 55 aa9.13□□□□□ -0.95
HMBOX1-212ENST00000558662 A0A087WTM6 91 aa9.09□□□□□ -0.95
HMBOX1-212ENST00000558662 A0A1B0GU33 70 aa9.09□□□□□ -0.95
HMBOX1-212ENST00000558662 KRTAP21-3Q3LHN1 58 aa9.05□□□□□ -0.96
HMBOX1-212ENST00000558662 H1FX-AS1Q4G0G2 97 aa9.04□□□□□ -0.96
HMBOX1-212ENST00000558662 NBEAL1Q6ZS30 2694 aa9.02□□□□□ -0.97
HMBOX1-212ENST00000558662 NOTCH1P46531 2555 aa9.02□□□□□ -0.97
HMBOX1-212ENST00000558662 SPINK1P00995 79 aa9.01□□□□□ -0.97
HMBOX1-212ENST00000558662 NUPR2A6NF83 97 aa9.01□□□□□ -0.97
HMBOX1-212ENST00000558662 DNAH10Q8IVF4 4471 aa9□□□□□ -0.97
HMBOX1-212ENST00000558662 MGAM2Q2M2H8 2515 aa8.99□□□□□ -0.97
HMBOX1-212ENST00000558662 HUWE1Q7Z6Z7 4374 aaKnown RBP8.97□□□□□ -0.97
HMBOX1-212ENST00000558662 LYSTQ99698 3801 aa8.93□□□□□ -0.98
HMBOX1-212ENST00000558662 Q8N1X5 172 aa8.93□□□□□ -0.98
HMBOX1-212ENST00000558662 DNHD1Q96M86 4753 aa8.92□□□□□ -0.98
HMBOX1-212ENST00000558662 DNAH9Q9NYC9 4486 aa8.92□□□□□ -0.98
HMBOX1-212ENST00000558662 P0C880 135 aa8.92□□□□□ -0.98
HMBOX1-212ENST00000558662 KRTAP13-2Q52LG2 175 aa8.9□□□□□ -0.98
HMBOX1-212ENST00000558662 TYMSOSQ8TAI1 123 aa8.9□□□□□ -0.98
HMBOX1-212ENST00000558662 DYNC2H1Q8NCM8 4307 aaKnown RBP8.86□□□□□ -0.99
HMBOX1-212ENST00000558662 DNAH8Q96JB1 4490 aa8.85□□□□□ -0.99
HMBOX1-212ENST00000558662 RPS29P62273 56 aaKnown RBP8.83□□□□□ -1
HMBOX1-212ENST00000558662 COX6B2Q6YFQ2 88 aa8.8□□□□□ -1
HMBOX1-212ENST00000558662 COL7A1Q02388 2944 aa8.8□□□□□ -1
HMBOX1-212ENST00000558662 CSMD3Q7Z407 3707 aa8.79□□□□□ -1
HMBOX1-212ENST00000558662 RPL37P61927 97 aaKnown RBP8.75□□□□□ -1.01
HMBOX1-212ENST00000558662 SPINT4Q6UDR6 99 aa8.75□□□□□ -1.01
HMBOX1-212ENST00000558662 STAB2Q8WWQ8 2551 aa8.74□□□□□ -1.01
HMBOX1-212ENST00000558662 PRKDCP78527 4128 aaKnown RBP8.74□□□□□ -1.01
HMBOX1-212ENST00000558662 MEGF8Q7Z7M0 2845 aa8.74□□□□□ -1.01
HMBOX1-212ENST00000558662 FRAS1Q86XX4 4008 aa8.73□□□□□ -1.01
HMBOX1-212ENST00000558662 KRTAP1-4P0C5Y4 121 aa8.71□□□□□ -1.01
HMBOX1-212ENST00000558662 C20orf166-AS1Q96NR2 134 aa8.71□□□□□ -1.01
HMBOX1-212ENST00000558662 KRTAP3-1Q9BYR8 98 aa8.7□□□□□ -1.02
HMBOX1-212ENST00000558662 KRTAP15-1Q3LI76 137 aa8.66□□□□□ -1.02
HMBOX1-212ENST00000558662 HECTD4Q9Y4D8 3996 aa8.66□□□□□ -1.02
HMBOX1-212ENST00000558662 CRIPTQ9P021 101 aa8.66□□□□□ -1.02
HMBOX1-212ENST00000558662 VPS13DQ5THJ4 4388 aa8.65□□□□□ -1.03
HMBOX1-212ENST00000558662 DNAH17Q9UFH2 4485 aa8.65□□□□□ -1.03
HMBOX1-212ENST00000558662 TGP01266 2768 aa8.64□□□□□ -1.03
HMBOX1-212ENST00000558662 DNAH7Q8WXX0 4024 aa8.63□□□□□ -1.03
HMBOX1-212ENST00000558662 FBN3Q75N90 2809 aa8.61□□□□□ -1.03
HMBOX1-212ENST00000558662 TPRXLQ17RH7 258 aa8.61□□□□□ -1.03
HMBOX1-212ENST00000558662 PLECQ15149 4684 aaKnown RBP8.6□□□□□ -1.03
HMBOX1-212ENST00000558662 STARD9Q9P2P6 4700 aa8.58□□□□□ -1.04
HMBOX1-212ENST00000558662 NDUFAF8A1L188 74 aa8.56□□□□□ -1.04
HMBOX1-212ENST00000558662 FLG2Q5D862 2391 aaPredicted RBP8.54□□□□□ -1.04
HMBOX1-212ENST00000558662 KRTAP10-6P60371 365 aaPredicted RBP8.48□□□□□ -1.05
HMBOX1-212ENST00000558662 KRTAP10-2P60368 255 aa8.43□□□□□ -1.06
HMBOX1-212ENST00000558662 DNAH6Q9C0G6 4158 aa8.41□□□□□ -1.06
HMBOX1-212ENST00000558662 DNAH2Q9P225 4427 aa8.39□□□□□ -1.07
HMBOX1-212ENST00000558662 KRTAP10-1P60331 282 aa8.38□□□□□ -1.07
HMBOX1-212ENST00000558662 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
HMBOX1-212ENST00000558662 S4R3F8 94 aa8.38□□□□□ -1.07
HMBOX1-212ENST00000558662 KRTAP3-2Q9BYR7 98 aa8.37□□□□□ -1.07
HMBOX1-212ENST00000558662 A0A0D9SG42 100 aa8.35□□□□□ -1.07
HMBOX1-212ENST00000558662 C9orf92A6NGG3 77 aa8.35□□□□□ -1.07
HMBOX1-212ENST00000558662 C10orf95Q9H7T3 257 aa8.34□□□□□ -1.07
HMBOX1-212ENST00000558662 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
HMBOX1-212ENST00000558662 DNAH11Q96DT5 4516 aa8.32□□□□□ -1.08
HMBOX1-212ENST00000558662 XP32Q5T750 250 aa8.3□□□□□ -1.08
HMBOX1-212ENST00000558662 KMT2AQ03164 3969 aa8.29□□□□□ -1.08
HMBOX1-212ENST00000558662 A0A0A0MQY5 61 aa8.29□□□□□ -1.08
HMBOX1-212ENST00000558662 KRTAP12-2P59991 146 aa8.2□□□□□ -1.1
HMBOX1-212ENST00000558662 KRTAP12-1P59990 96 aa8.2□□□□□ -1.1
HMBOX1-212ENST00000558662 SACSQ9NZJ4 4579 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms