RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 KMT2BQ9UMN6 2715 aaPredicted RBP8.47□□□□□ -1.05
SHISA9-203ENST00000558583 DSPP15924 2871 aaKnown RBP8.47□□□□□ -1.05
SHISA9-203ENST00000558583 KRTAP13-1Q8IUC0 172 aa8.45□□□□□ -1.06
SHISA9-203ENST00000558583 LRBAP50851 2863 aa8.44□□□□□ -1.06
SHISA9-203ENST00000558583 ASH1LQ9NR48 2969 aaKnown RBP8.44□□□□□ -1.06
SHISA9-203ENST00000558583 XP32Q5T750 250 aa8.43□□□□□ -1.06
SHISA9-203ENST00000558583 H0YAA0 97 aa8.4□□□□□ -1.06
SHISA9-203ENST00000558583 APCP25054 2843 aa8.36□□□□□ -1.07
SHISA9-203ENST00000558583 PRO2289Q9P1D8 64 aa8.35□□□□□ -1.07
SHISA9-203ENST00000558583 BOD1L1Q8NFC6 3051 aa8.35□□□□□ -1.07
SHISA9-203ENST00000558583 FRYLO94915 3013 aa8.34□□□□□ -1.07
SHISA9-203ENST00000558583 MYO15AQ9UKN7 3530 aa8.33□□□□□ -1.08
SHISA9-203ENST00000558583 ZNF292O60281 2723 aa8.33□□□□□ -1.08
SHISA9-203ENST00000558583 ITPR2Q14571 2701 aa8.32□□□□□ -1.08
SHISA9-203ENST00000558583 USP34Q70CQ2 3546 aa8.31□□□□□ -1.08
SHISA9-203ENST00000558583 IGSF10Q6WRI0 2623 aa8.31□□□□□ -1.08
SHISA9-203ENST00000558583 P0C880 135 aa8.3□□□□□ -1.08
SHISA9-203ENST00000558583 SPTBN5Q9NRC6 3674 aaKnown RBP8.27□□□□□ -1.09
SHISA9-203ENST00000558583 DCHS1Q96JQ0 3298 aa8.27□□□□□ -1.09
SHISA9-203ENST00000558583 COL12A1Q99715 3063 aa8.27□□□□□ -1.09
SHISA9-203ENST00000558583 NSD1Q96L73 2696 aaPredicted RBP8.24□□□□□ -1.09
SHISA9-203ENST00000558583 ATMQ13315 3056 aa8.24□□□□□ -1.09
SHISA9-203ENST00000558583 NBEAQ8NFP9 2946 aa8.24□□□□□ -1.09
SHISA9-203ENST00000558583 WDFY3Q8IZQ1 3526 aa8.22□□□□□ -1.09
SHISA9-203ENST00000558583 TACC2O95359 2948 aa8.21□□□□□ -1.1
SHISA9-203ENST00000558583 UBR5O95071 2799 aaPredicted RBP8.2□□□□□ -1.1
SHISA9-203ENST00000558583 HIVEP1P15822 2718 aa8.19□□□□□ -1.1
SHISA9-203ENST00000558583 TPRXLQ17RH7 258 aa8.18□□□□□ -1.1
SHISA9-203ENST00000558583 ASPMQ8IZT6 3477 aa8.18□□□□□ -1.1
SHISA9-203ENST00000558583 ADGRG4Q8IZF6 3080 aa8.17□□□□□ -1.1
SHISA9-203ENST00000558583 PP632Q6XCG6 107 aa8.16□□□□□ -1.1
SHISA9-203ENST00000558583 ITPR1Q14643 2758 aa8.16□□□□□ -1.1
SHISA9-203ENST00000558583 KRTAP1-4P0C5Y4 121 aa8.13□□□□□ -1.11
SHISA9-203ENST00000558583 UTP20O75691 2785 aaKnown RBP8.11□□□□□ -1.11
SHISA9-203ENST00000558583 ZZEF1O43149 2961 aa8.11□□□□□ -1.11
SHISA9-203ENST00000558583 LOC400499M0QZD8 3231 aa8.11□□□□□ -1.11
SHISA9-203ENST00000558583 EYSQ5T1H1 3165 aa8.09□□□□□ -1.11
SHISA9-203ENST00000558583 KRTAP13-3Q3SY46 172 aa8□□□□□ -1.13
SHISA9-203ENST00000558583 CSMD1Q96PZ7 3565 aa7.99□□□□□ -1.13
SHISA9-203ENST00000558583 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
SHISA9-203ENST00000558583 TENM4Q6N022 2769 aa7.96□□□□□ -1.13
SHISA9-203ENST00000558583 FLNCQ14315 2725 aa7.93□□□□□ -1.14
SHISA9-203ENST00000558583 DMXL1Q9Y485 3027 aa7.93□□□□□ -1.14
SHISA9-203ENST00000558583 ZFHX4Q86UP3 3567 aa7.92□□□□□ -1.14
SHISA9-203ENST00000558583 TNRC18O15417 2968 aaPredicted RBP7.91□□□□□ -1.14
SHISA9-203ENST00000558583 CELSR2Q9HCU4 2923 aa7.9□□□□□ -1.14
SHISA9-203ENST00000558583 LAMA5O15230 3695 aa7.88□□□□□ -1.15
SHISA9-203ENST00000558583 NBPF19A0A087WUL8 3843 aa7.83□□□□□ -1.16
SHISA9-203ENST00000558583 CRCT1Q9UGL9 99 aa7.82□□□□□ -1.16
SHISA9-203ENST00000558583 TENM1Q9UKZ4 2725 aa7.74□□□□□ -1.17
SHISA9-203ENST00000558583 DCHS2Q6V1P9 2916 aa7.74□□□□□ -1.17
SHISA9-203ENST00000558583 CELSR1Q9NYQ6 3014 aa7.72□□□□□ -1.17
SHISA9-203ENST00000558583 RELNP78509 3460 aa7.72□□□□□ -1.17
SHISA9-203ENST00000558583 TENM2Q9NT68 2774 aa7.71□□□□□ -1.18
SHISA9-203ENST00000558583 TGP01266 2768 aa7.66□□□□□ -1.18
SHISA9-203ENST00000558583 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
SHISA9-203ENST00000558583 KRTAP13-4Q3LI77 160 aa7.61□□□□□ -1.19
SHISA9-203ENST00000558583 KRTAP15-1Q3LI76 137 aa7.6□□□□□ -1.19
SHISA9-203ENST00000558583 FBN2P35556 2912 aa7.59□□□□□ -1.19
SHISA9-203ENST00000558583 SMG1Q96Q15 3661 aaKnown RBP7.56□□□□□ -1.2
SHISA9-203ENST00000558583 NF1P21359 2839 aa7.53□□□□□ -1.2
SHISA9-203ENST00000558583 CUBNO60494 3623 aa7.52□□□□□ -1.21
SHISA9-203ENST00000558583 PKD1L1Q8TDX9 2849 aa7.5□□□□□ -1.21
SHISA9-203ENST00000558583 SVEP1Q4LDE5 3571 aa7.5□□□□□ -1.21
SHISA9-203ENST00000558583 TENM3Q9P273 2699 aa7.47□□□□□ -1.21
SHISA9-203ENST00000558583 DMDP11532 3685 aa7.47□□□□□ -1.21
SHISA9-203ENST00000558583 HRNRQ86YZ3 2850 aaPredicted RBP7.47□□□□□ -1.21
SHISA9-203ENST00000558583 SPENQ96T58 3664 aaKnown RBP7.46□□□□□ -1.22
SHISA9-203ENST00000558583 ZANQ9Y493 2812 aa7.46□□□□□ -1.22
SHISA9-203ENST00000558583 KRTAP3-1Q9BYR8 98 aa7.45□□□□□ -1.22
SHISA9-203ENST00000558583 VWFP04275 2813 aa7.44□□□□□ -1.22
SHISA9-203ENST00000558583 NIPBLQ6KC79 2804 aaeCLIP7.39□□□□□ -1.23
SHISA9-203ENST00000558583 PDZD2O15018 2839 aa7.32□□□□□ -1.24
SHISA9-203ENST00000558583 MXRA5Q9NR99 2828 aa7.27□□□□□ -1.24
SHISA9-203ENST00000558583 KRTAP4-5Q9BYR2 181 aa7.27□□□□□ -1.25
SHISA9-203ENST00000558583 KRTAP10-6P60371 365 aaPredicted RBP7.23□□□□□ -1.25
SHISA9-203ENST00000558583 MUC3AQ02505 3323 aa7.19□□□□□ -1.26
SHISA9-203ENST00000558583 LORP23490 312 aaPredicted RBP7.18□□□□□ -1.26
SHISA9-203ENST00000558583 ZFHX3Q15911 3703 aa7.16□□□□□ -1.26
SHISA9-203ENST00000558583 CSMD2Q7Z408 3487 aa7.13□□□□□ -1.27
SHISA9-203ENST00000558583 KRTAP10-12P60413 245 aa7.13□□□□□ -1.27
SHISA9-203ENST00000558583 ANK3Q12955 4377 aaKnown RBP7.03□□□□□ -1.28
SHISA9-203ENST00000558583 INE1O15225 51 aa7.01□□□□□ -1.29
SHISA9-203ENST00000558583 SRRM2Q9UQ35 2752 aaKnown RBP7.01□□□□□ -1.29
SHISA9-203ENST00000558583 CSMD3Q7Z407 3707 aa7□□□□□ -1.29
SHISA9-203ENST00000558583 MT1HL1P0DM35 61 aa7□□□□□ -1.29
SHISA9-203ENST00000558583 VPS13CQ709C8 3753 aa6.95□□□□□ -1.3
SHISA9-203ENST00000558583 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
SHISA9-203ENST00000558583 KRTAP8-1Q8IUC2 63 aa6.91□□□□□ -1.3
SHISA9-203ENST00000558583 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
SHISA9-203ENST00000558583 TRRAPQ9Y4A5 3859 aa6.91□□□□□ -1.3
SHISA9-203ENST00000558583 LCE3AQ5TA76 89 aa6.9□□□□□ -1.3
SHISA9-203ENST00000558583 MEGF8Q7Z7M0 2845 aa6.9□□□□□ -1.3
SHISA9-203ENST00000558583 ALMS1Q8TCU4 4167 aa6.88□□□□□ -1.31
SHISA9-203ENST00000558583 HUWE1Q7Z6Z7 4374 aaKnown RBP6.85□□□□□ -1.31
SHISA9-203ENST00000558583 FBN3Q75N90 2809 aa6.85□□□□□ -1.31
SHISA9-203ENST00000558583 KRTAP12-3P60328 96 aa6.83□□□□□ -1.32
SHISA9-203ENST00000558583 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
SHISA9-203ENST00000558583 FBN1P35555 2871 aaKnown RBP6.77□□□□□ -1.33
SHISA9-203ENST00000558583 COL7A1Q02388 2944 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms