RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 CDK2AP2O75956 126 aa6.43□□□□□ -1.38
MTHFD1-210ENST00000555252 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.43□□□□□ -1.38
MTHFD1-210ENST00000555252 TGP01266 2768 aa6.43□□□□□ -1.38
MTHFD1-210ENST00000555252 A0A087X002 238 aa6.4□□□□□ -1.38
MTHFD1-210ENST00000555252 RTL8CO15255 209 aa6.4□□□□□ -1.38
MTHFD1-210ENST00000555252 SPINK7P58062 85 aa6.4□□□□□ -1.38
MTHFD1-210ENST00000555252 IGHV6-1A0A0B4J1U7 121 aa6.38□□□□□ -1.39
MTHFD1-210ENST00000555252 ACYP2P14621 99 aa6.38□□□□□ -1.39
MTHFD1-210ENST00000555252 TENM2Q9NT68 2774 aa6.38□□□□□ -1.39
MTHFD1-210ENST00000555252 IGLV5-52A0A0A0MRZ9 124 aa6.37□□□□□ -1.39
MTHFD1-210ENST00000555252 PLECQ15149 4684 aaKnown RBP6.37□□□□□ -1.39
MTHFD1-210ENST00000555252 IGLV9-49A0A0B4J1Y8 123 aa6.37□□□□□ -1.39
MTHFD1-210ENST00000555252 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
MTHFD1-210ENST00000555252 ZNF861PO60384 105 aa6.35□□□□□ -1.39
MTHFD1-210ENST00000555252 KRTAP13-3Q3SY46 172 aa6.35□□□□□ -1.39
MTHFD1-210ENST00000555252 LYSTQ99698 3801 aa6.35□□□□□ -1.39
MTHFD1-210ENST00000555252 C1orf134Q5TEV5 83 aa6.34□□□□□ -1.39
MTHFD1-210ENST00000555252 WWC2-AS2Q96NR7 200 aa6.34□□□□□ -1.39
MTHFD1-210ENST00000555252 CSMD3Q7Z407 3707 aa6.34□□□□□ -1.4
MTHFD1-210ENST00000555252 VPS13DQ5THJ4 4388 aa6.33□□□□□ -1.4
MTHFD1-210ENST00000555252 C8orf87E5RJ46 101 aa6.32□□□□□ -1.4
MTHFD1-210ENST00000555252 DMAC1Q96GE9 116 aa6.32□□□□□ -1.4
MTHFD1-210ENST00000555252 ALMS1Q8TCU4 4167 aa6.32□□□□□ -1.4
MTHFD1-210ENST00000555252 PLA2G1BP04054 148 aaKnown RBP6.31□□□□□ -1.4
MTHFD1-210ENST00000555252 DNAH7Q8WXX0 4024 aa6.31□□□□□ -1.4
MTHFD1-210ENST00000555252 PRR26Q8N8Z3 221 aa6.3□□□□□ -1.4
MTHFD1-210ENST00000555252 IGLV7-43P04211 117 aa6.28□□□□□ -1.4
MTHFD1-210ENST00000555252 LINC00313P59037 77 aa6.28□□□□□ -1.4
MTHFD1-210ENST00000555252 SPATA8Q6RVD6 105 aa6.28□□□□□ -1.4
MTHFD1-210ENST00000555252 STARD9Q9P2P6 4700 aa6.27□□□□□ -1.41
MTHFD1-210ENST00000555252 Q5W150 140 aa6.27□□□□□ -1.41
MTHFD1-210ENST00000555252 NOTCH2NLQ7Z3S9 236 aa6.27□□□□□ -1.41
MTHFD1-210ENST00000555252 A0A1B0GU69 56 aa6.26□□□□□ -1.41
MTHFD1-210ENST00000555252 FAM229AH3BQW9 127 aa6.25□□□□□ -1.41
MTHFD1-210ENST00000555252 LY6G6CO95867 125 aa6.24□□□□□ -1.41
MTHFD1-210ENST00000555252 SSBP3-AS1Q7Z2R9 100 aa6.24□□□□□ -1.41
MTHFD1-210ENST00000555252 DNAH17Q9UFH2 4485 aa6.24□□□□□ -1.41
MTHFD1-210ENST00000555252 ANAPC11Q9NYG5 84 aa6.23□□□□□ -1.41
MTHFD1-210ENST00000555252 UQCR11O14957 56 aa6.21□□□□□ -1.41
MTHFD1-210ENST00000555252 SRRM2Q9UQ35 2752 aaKnown RBP6.21□□□□□ -1.42
MTHFD1-210ENST00000555252 HECTD4Q9Y4D8 3996 aa6.2□□□□□ -1.42
MTHFD1-210ENST00000555252 IGKV2-30P06310 120 aa6.2□□□□□ -1.42
MTHFD1-210ENST00000555252 LINC01554Q52M75 96 aa6.19□□□□□ -1.42
MTHFD1-210ENST00000555252 MIR22HGQ0VDD5 57 aa6.19□□□□□ -1.42
MTHFD1-210ENST00000555252 CIRBP-AS1Q8TBR5 109 aa6.19□□□□□ -1.42
MTHFD1-210ENST00000555252 SPINK6Q6UWN8 80 aa6.18□□□□□ -1.42
MTHFD1-210ENST00000555252 PRAC1Q96KF2 57 aa6.16□□□□□ -1.42
MTHFD1-210ENST00000555252 DNAH2Q9P225 4427 aa6.16□□□□□ -1.42
MTHFD1-210ENST00000555252 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
MTHFD1-210ENST00000555252 Q6ZSA8 131 aa6.15□□□□□ -1.42
MTHFD1-210ENST00000555252 DNAH6Q9C0G6 4158 aa6.14□□□□□ -1.43
MTHFD1-210ENST00000555252 DNAH8Q96JB1 4490 aa6.14□□□□□ -1.43
MTHFD1-210ENST00000555252 RETNLBQ9BQ08 111 aa6.13□□□□□ -1.43
MTHFD1-210ENST00000555252 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
MTHFD1-210ENST00000555252 KMT2AQ03164 3969 aa6.1□□□□□ -1.43
MTHFD1-210ENST00000555252 KRTAP10-1P60331 282 aa6.1□□□□□ -1.43
MTHFD1-210ENST00000555252 C4orf48Q5BLP8 95 aa6.09□□□□□ -1.43
MTHFD1-210ENST00000555252 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
MTHFD1-210ENST00000555252 IGKV2D-30A0A075B6S6 120 aa6.08□□□□□ -1.44
MTHFD1-210ENST00000555252 KRTAP13-2Q52LG2 175 aa6.08□□□□□ -1.44
MTHFD1-210ENST00000555252 KMT2CQ8NEZ4 4911 aaKnown RBP6.06□□□□□ -1.44
MTHFD1-210ENST00000555252 HYDINQ4G0P3 5121 aa6.05□□□□□ -1.44
MTHFD1-210ENST00000555252 KRTAP1-4P0C5Y4 121 aa6.03□□□□□ -1.44
MTHFD1-210ENST00000555252 DNAH5Q8TE73 4624 aa6.03□□□□□ -1.44
MTHFD1-210ENST00000555252 DNAH11Q96DT5 4516 aa6.03□□□□□ -1.44
MTHFD1-210ENST00000555252 FRAS1Q86XX4 4008 aa6.03□□□□□ -1.44
MTHFD1-210ENST00000555252 SACSQ9NZJ4 4579 aa6.01□□□□□ -1.45
MTHFD1-210ENST00000555252 CSAG1Q6PB30 78 aa6.01□□□□□ -1.45
MTHFD1-210ENST00000555252 SPINK1P00995 79 aa6□□□□□ -1.45
MTHFD1-210ENST00000555252 TYMSOSQ8TAI1 123 aa5.98□□□□□ -1.45
MTHFD1-210ENST00000555252 RYR3Q15413 4870 aa5.97□□□□□ -1.45
MTHFD1-210ENST00000555252 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.46
MTHFD1-210ENST00000555252 PKD1P98161 4303 aa5.95□□□□□ -1.46
MTHFD1-210ENST00000555252 RYR2Q92736 4967 aa5.95□□□□□ -1.46
MTHFD1-210ENST00000555252 A8MUU9 505 aa5.93□□□□□ -1.46
MTHFD1-210ENST00000555252 LRP1BQ9NZR2 4599 aa5.92□□□□□ -1.46
MTHFD1-210ENST00000555252 FAT2Q9NYQ8 4349 aa5.91□□□□□ -1.46
MTHFD1-210ENST00000555252 LINC00304Q8N9R0 145 aa5.91□□□□□ -1.46
MTHFD1-210ENST00000555252 H3BS24 57 aa5.9□□□□□ -1.47
MTHFD1-210ENST00000555252 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
MTHFD1-210ENST00000555252 H0YAA0 97 aa5.87□□□□□ -1.47
MTHFD1-210ENST00000555252 Q8N1X5 172 aa5.84□□□□□ -1.47
MTHFD1-210ENST00000555252 A0A1B0GU33 70 aa5.84□□□□□ -1.47
MTHFD1-210ENST00000555252 A0A1B0GVY2 172 aa5.83□□□□□ -1.48
MTHFD1-210ENST00000555252 H1FX-AS1Q4G0G2 97 aa5.83□□□□□ -1.48
MTHFD1-210ENST00000555252 PKHD1P08F94 4074 aa5.82□□□□□ -1.48
MTHFD1-210ENST00000555252 VPS13BQ7Z7G8 4022 aa5.81□□□□□ -1.48
MTHFD1-210ENST00000555252 K7ERS5 55 aa5.8□□□□□ -1.48
MTHFD1-210ENST00000555252 SMR3BP02814 79 aaPredicted RBP5.79□□□□□ -1.48
MTHFD1-210ENST00000555252 ROMO1P60602 79 aa5.79□□□□□ -1.48
MTHFD1-210ENST00000555252 KRTAP10-4P60372 401 aaPredicted RBP5.78□□□□□ -1.48
MTHFD1-210ENST00000555252 C20orf166-AS1Q96NR2 134 aa5.77□□□□□ -1.49
MTHFD1-210ENST00000555252 EPPK1P58107 5090 aaKnown RBP5.76□□□□□ -1.49
MTHFD1-210ENST00000555252 DYNC1H1Q14204 4646 aaKnown RBP5.73□□□□□ -1.49
MTHFD1-210ENST00000555252 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
MTHFD1-210ENST00000555252 C9orf92A6NGG3 77 aa5.7□□□□□ -1.5
MTHFD1-210ENST00000555252 COX6B2Q6YFQ2 88 aa5.67□□□□□ -1.5
MTHFD1-210ENST00000555252 APOBP04114 4563 aaKnown RBP5.67□□□□□ -1.5
MTHFD1-210ENST00000555252 PKHD1L1Q86WI1 4243 aa5.65□□□□□ -1.5
MTHFD1-210ENST00000555252 RPL37P61927 97 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms