RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 TNRC18O15417 2968 aaPredicted RBP7.9□□□□□ -1.15
VTI1B-204ENST00000554659 ADGRG4Q8IZF6 3080 aa7.87□□□□□ -1.15
VTI1B-204ENST00000554659 DMDP11532 3685 aa7.86□□□□□ -1.15
VTI1B-204ENST00000554659 MUC3AQ02505 3323 aa7.86□□□□□ -1.15
VTI1B-204ENST00000554659 KRTAP13-2Q52LG2 175 aa7.86□□□□□ -1.15
VTI1B-204ENST00000554659 IGSF10Q6WRI0 2623 aa7.86□□□□□ -1.15
VTI1B-204ENST00000554659 A8MUU9 505 aa7.84□□□□□ -1.16
VTI1B-204ENST00000554659 NSD1Q96L73 2696 aaPredicted RBP7.83□□□□□ -1.16
VTI1B-204ENST00000554659 DMXL2Q8TDJ6 3036 aa7.83□□□□□ -1.16
VTI1B-204ENST00000554659 UBR5O95071 2799 aaPredicted RBP7.82□□□□□ -1.16
VTI1B-204ENST00000554659 ASPMQ8IZT6 3477 aa7.82□□□□□ -1.16
VTI1B-204ENST00000554659 DMXL1Q9Y485 3027 aa7.81□□□□□ -1.16
VTI1B-204ENST00000554659 CFAP47Q6ZTR5 3102 aa7.81□□□□□ -1.16
VTI1B-204ENST00000554659 ATMQ13315 3056 aa7.77□□□□□ -1.17
VTI1B-204ENST00000554659 KALRNO60229 2985 aa7.76□□□□□ -1.17
VTI1B-204ENST00000554659 LRBAP50851 2863 aa7.72□□□□□ -1.17
VTI1B-204ENST00000554659 LAMA5O15230 3695 aa7.71□□□□□ -1.18
VTI1B-204ENST00000554659 ZFHX4Q86UP3 3567 aa7.71□□□□□ -1.18
VTI1B-204ENST00000554659 ZZEF1O43149 2961 aa7.7□□□□□ -1.18
VTI1B-204ENST00000554659 TACC2O95359 2948 aa7.7□□□□□ -1.18
VTI1B-204ENST00000554659 ITPR2Q14571 2701 aa7.69□□□□□ -1.18
VTI1B-204ENST00000554659 ITPR1Q14643 2758 aa7.69□□□□□ -1.18
VTI1B-204ENST00000554659 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
VTI1B-204ENST00000554659 DCHS1Q96JQ0 3298 aa7.68□□□□□ -1.18
VTI1B-204ENST00000554659 TNP1P09430 55 aa7.65□□□□□ -1.18
VTI1B-204ENST00000554659 COL12A1Q99715 3063 aa7.65□□□□□ -1.19
VTI1B-204ENST00000554659 KMT2BQ9UMN6 2715 aaPredicted RBP7.64□□□□□ -1.19
VTI1B-204ENST00000554659 RELNP78509 3460 aa7.58□□□□□ -1.2
VTI1B-204ENST00000554659 APCP25054 2843 aa7.56□□□□□ -1.2
VTI1B-204ENST00000554659 FLNCQ14315 2725 aa7.55□□□□□ -1.2
VTI1B-204ENST00000554659 UTP20O75691 2785 aaKnown RBP7.54□□□□□ -1.2
VTI1B-204ENST00000554659 ASH1LQ9NR48 2969 aaKnown RBP7.49□□□□□ -1.21
VTI1B-204ENST00000554659 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
VTI1B-204ENST00000554659 SMG1Q96Q15 3661 aaKnown RBP7.47□□□□□ -1.21
VTI1B-204ENST00000554659 NIPBLQ6KC79 2804 aaeCLIP7.46□□□□□ -1.22
VTI1B-204ENST00000554659 PP632Q6XCG6 107 aa7.45□□□□□ -1.22
VTI1B-204ENST00000554659 HIVEP1P15822 2718 aa7.44□□□□□ -1.22
VTI1B-204ENST00000554659 H0YAA0 97 aa7.42□□□□□ -1.22
VTI1B-204ENST00000554659 P0C880 135 aa7.4□□□□□ -1.23
VTI1B-204ENST00000554659 XP32Q5T750 250 aa7.38□□□□□ -1.23
VTI1B-204ENST00000554659 KRTAP10-8P60410 259 aa7.37□□□□□ -1.23
VTI1B-204ENST00000554659 CSMD1Q96PZ7 3565 aa7.36□□□□□ -1.23
VTI1B-204ENST00000554659 KRTAP21-3Q3LHN1 58 aa7.36□□□□□ -1.23
VTI1B-204ENST00000554659 CRYBG3Q68DQ2 2970 aa7.34□□□□□ -1.23
VTI1B-204ENST00000554659 HRNRQ86YZ3 2850 aaPredicted RBP7.34□□□□□ -1.23
VTI1B-204ENST00000554659 ZANQ9Y493 2812 aa7.33□□□□□ -1.24
VTI1B-204ENST00000554659 SVEP1Q4LDE5 3571 aa7.31□□□□□ -1.24
VTI1B-204ENST00000554659 CELSR2Q9HCU4 2923 aa7.3□□□□□ -1.24
VTI1B-204ENST00000554659 DCHS2Q6V1P9 2916 aa7.3□□□□□ -1.24
VTI1B-204ENST00000554659 TENM4Q6N022 2769 aa7.26□□□□□ -1.25
VTI1B-204ENST00000554659 A0A1B0GVY2 172 aa7.25□□□□□ -1.25
VTI1B-204ENST00000554659 KRTAP13-3Q3SY46 172 aa7.22□□□□□ -1.25
VTI1B-204ENST00000554659 TPRXLQ17RH7 258 aa7.21□□□□□ -1.26
VTI1B-204ENST00000554659 TENM3Q9P273 2699 aa7.2□□□□□ -1.26
VTI1B-204ENST00000554659 FBN2P35556 2912 aa7.17□□□□□ -1.26
VTI1B-204ENST00000554659 CELSR1Q9NYQ6 3014 aa7.16□□□□□ -1.26
VTI1B-204ENST00000554659 SPENQ96T58 3664 aaKnown RBP7.16□□□□□ -1.26
VTI1B-204ENST00000554659 NF1P21359 2839 aa7.15□□□□□ -1.26
VTI1B-204ENST00000554659 CUBNO60494 3623 aa7.12□□□□□ -1.27
VTI1B-204ENST00000554659 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
VTI1B-204ENST00000554659 MXRA5Q9NR99 2828 aa7.04□□□□□ -1.28
VTI1B-204ENST00000554659 BSNQ9UPA5 3926 aa7.03□□□□□ -1.28
VTI1B-204ENST00000554659 TGP01266 2768 aa7□□□□□ -1.29
VTI1B-204ENST00000554659 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
VTI1B-204ENST00000554659 TENM1Q9UKZ4 2725 aa7□□□□□ -1.29
VTI1B-204ENST00000554659 CSMD2Q7Z408 3487 aa6.95□□□□□ -1.3
VTI1B-204ENST00000554659 KRTAP12-2P59991 146 aa6.92□□□□□ -1.3
VTI1B-204ENST00000554659 NBPF19A0A087WUL8 3843 aa6.87□□□□□ -1.31
VTI1B-204ENST00000554659 PDZD2O15018 2839 aa6.85□□□□□ -1.31
VTI1B-204ENST00000554659 TENM2Q9NT68 2774 aa6.84□□□□□ -1.31
VTI1B-204ENST00000554659 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
VTI1B-204ENST00000554659 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
VTI1B-204ENST00000554659 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
VTI1B-204ENST00000554659 VPS13CQ709C8 3753 aa6.81□□□□□ -1.32
VTI1B-204ENST00000554659 ZFHX3Q15911 3703 aa6.73□□□□□ -1.33
VTI1B-204ENST00000554659 PKD1L1Q8TDX9 2849 aa6.71□□□□□ -1.34
VTI1B-204ENST00000554659 VWFP04275 2813 aa6.67□□□□□ -1.34
VTI1B-204ENST00000554659 KRTAP10-6P60371 365 aaPredicted RBP6.65□□□□□ -1.34
VTI1B-204ENST00000554659 OTOGQ6ZRI0 2925 aa6.62□□□□□ -1.35
VTI1B-204ENST00000554659 FBN1P35555 2871 aaKnown RBP6.61□□□□□ -1.35
VTI1B-204ENST00000554659 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
VTI1B-204ENST00000554659 SRRM2Q9UQ35 2752 aaKnown RBP6.52□□□□□ -1.37
VTI1B-204ENST00000554659 TRRAPQ9Y4A5 3859 aa6.51□□□□□ -1.37
VTI1B-204ENST00000554659 ZNF469Q96JG9 3925 aaPredicted RBP6.49□□□□□ -1.37
VTI1B-204ENST00000554659 ANK3Q12955 4377 aaKnown RBP6.47□□□□□ -1.37
VTI1B-204ENST00000554659 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
VTI1B-204ENST00000554659 INE1O15225 51 aa6.39□□□□□ -1.39
VTI1B-204ENST00000554659 KRTAP3-3Q9BYR6 98 aa6.39□□□□□ -1.39
VTI1B-204ENST00000554659 FBN3Q75N90 2809 aa6.36□□□□□ -1.39
VTI1B-204ENST00000554659 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
VTI1B-204ENST00000554659 MEGF8Q7Z7M0 2845 aa6.3□□□□□ -1.4
VTI1B-204ENST00000554659 AKAP9Q99996 3911 aa6.27□□□□□ -1.41
VTI1B-204ENST00000554659 KRTAP10-4P60372 401 aaPredicted RBP6.21□□□□□ -1.41
VTI1B-204ENST00000554659 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
VTI1B-204ENST00000554659 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
VTI1B-204ENST00000554659 COL7A1Q02388 2944 aa6.16□□□□□ -1.42
VTI1B-204ENST00000554659 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
VTI1B-204ENST00000554659 CSMD3Q7Z407 3707 aa6.13□□□□□ -1.43
VTI1B-204ENST00000554659 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
VTI1B-204ENST00000554659 HUWE1Q7Z6Z7 4374 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms