RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 NBEAL1Q6ZS30 2694 aa5.38□□□□□ -1.55
CCNK-203ENST00000553865 ADM2Q7Z4H4 148 aa5.37□□□□□ -1.55
CCNK-203ENST00000553865 Q5VSD8 79 aa5.36□□□□□ -1.55
CCNK-203ENST00000553865 DMXL1Q9Y485 3027 aa5.36□□□□□ -1.55
CCNK-203ENST00000553865 KRTAP10-1P60331 282 aa5.35□□□□□ -1.55
CCNK-203ENST00000553865 Q6ZRN7 208 aaPredicted RBP5.34□□□□□ -1.55
CCNK-203ENST00000553865 ITPR1Q14643 2758 aa5.34□□□□□ -1.55
CCNK-203ENST00000553865 PANO1I0J062 215 aa5.34□□□□□ -1.55
CCNK-203ENST00000553865 DCHS1Q96JQ0 3298 aa5.33□□□□□ -1.56
CCNK-203ENST00000553865 ASPMQ8IZT6 3477 aa5.33□□□□□ -1.56
CCNK-203ENST00000553865 KRTAP10-2P60368 255 aa5.32□□□□□ -1.56
CCNK-203ENST00000553865 ZFHX4Q86UP3 3567 aa5.3□□□□□ -1.56
CCNK-203ENST00000553865 DMDP11532 3685 aa5.3□□□□□ -1.56
CCNK-203ENST00000553865 MUC3AQ02505 3323 aa5.29□□□□□ -1.56
CCNK-203ENST00000553865 KRTAP7-1Q8IUC3 87 aa5.29□□□□□ -1.56
CCNK-203ENST00000553865 NSD1Q96L73 2696 aaPredicted RBP5.27□□□□□ -1.57
CCNK-203ENST00000553865 RPS29P62273 56 aaKnown RBP5.27□□□□□ -1.57
CCNK-203ENST00000553865 KRTAP11-1Q8IUC1 163 aa5.26□□□□□ -1.57
CCNK-203ENST00000553865 APCP25054 2843 aa5.25□□□□□ -1.57
CCNK-203ENST00000553865 A0A087X002 238 aa5.24□□□□□ -1.57
CCNK-203ENST00000553865 A8MU10 97 aa5.24□□□□□ -1.57
CCNK-203ENST00000553865 NBEAL2Q6ZNJ1 2754 aa5.24□□□□□ -1.57
CCNK-203ENST00000553865 UTP20O75691 2785 aaKnown RBP5.24□□□□□ -1.57
CCNK-203ENST00000553865 HIVEP1P15822 2718 aa5.23□□□□□ -1.57
CCNK-203ENST00000553865 KRTAP13-1Q8IUC0 172 aa5.23□□□□□ -1.57
CCNK-203ENST00000553865 LAMA5O15230 3695 aa5.22□□□□□ -1.57
CCNK-203ENST00000553865 HRNRQ86YZ3 2850 aaPredicted RBP5.21□□□□□ -1.58
CCNK-203ENST00000553865 NOTCH2NLQ7Z3S9 236 aa5.2□□□□□ -1.58
CCNK-203ENST00000553865 ZANQ9Y493 2812 aa5.2□□□□□ -1.58
CCNK-203ENST00000553865 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
CCNK-203ENST00000553865 ASH1LQ9NR48 2969 aaKnown RBP5.19□□□□□ -1.58
CCNK-203ENST00000553865 A8MUU9 505 aa5.19□□□□□ -1.58
CCNK-203ENST00000553865 DMBT1Q9UGM3 2413 aaPredicted RBP5.18□□□□□ -1.58
CCNK-203ENST00000553865 RELNP78509 3460 aa5.18□□□□□ -1.58
CCNK-203ENST00000553865 TNP1P09430 55 aa5.17□□□□□ -1.58
CCNK-203ENST00000553865 SMG1Q96Q15 3661 aaKnown RBP5.16□□□□□ -1.58
CCNK-203ENST00000553865 NIPBLQ6KC79 2804 aaeCLIP5.13□□□□□ -1.59
CCNK-203ENST00000553865 CSMD1Q96PZ7 3565 aa5.13□□□□□ -1.59
CCNK-203ENST00000553865 KRTAP13-2Q52LG2 175 aa5.12□□□□□ -1.59
CCNK-203ENST00000553865 TENM4Q6N022 2769 aa5.12□□□□□ -1.59
CCNK-203ENST00000553865 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
CCNK-203ENST00000553865 NF1P21359 2839 aa5.1□□□□□ -1.59
CCNK-203ENST00000553865 CRYBG3Q68DQ2 2970 aa5.09□□□□□ -1.59
CCNK-203ENST00000553865 DCHS2Q6V1P9 2916 aa5.08□□□□□ -1.6
CCNK-203ENST00000553865 CELSR2Q9HCU4 2923 aa5.08□□□□□ -1.6
CCNK-203ENST00000553865 PDZD2O15018 2839 aa5.05□□□□□ -1.6
CCNK-203ENST00000553865 STAB2Q8WWQ8 2551 aa5.05□□□□□ -1.6
CCNK-203ENST00000553865 SVEP1Q4LDE5 3571 aa5.04□□□□□ -1.6
CCNK-203ENST00000553865 FBN2P35556 2912 aa5.03□□□□□ -1.6
CCNK-203ENST00000553865 CELSR1Q9NYQ6 3014 aa4.99□□□□□ -1.61
CCNK-203ENST00000553865 P0C880 135 aa4.98□□□□□ -1.61
CCNK-203ENST00000553865 SPENQ96T58 3664 aaKnown RBP4.97□□□□□ -1.61
CCNK-203ENST00000553865 MXRA5Q9NR99 2828 aa4.96□□□□□ -1.62
CCNK-203ENST00000553865 KRTAP1-4P0C5Y4 121 aa4.93□□□□□ -1.62
CCNK-203ENST00000553865 CUBNO60494 3623 aa4.93□□□□□ -1.62
CCNK-203ENST00000553865 ANK3Q12955 4377 aaKnown RBP4.92□□□□□ -1.62
CCNK-203ENST00000553865 A0A1B0GVY2 172 aa4.89□□□□□ -1.63
CCNK-203ENST00000553865 KRTAP10-8P60410 259 aa4.88□□□□□ -1.63
CCNK-203ENST00000553865 H0YAA0 97 aa4.83□□□□□ -1.64
CCNK-203ENST00000553865 OTOGQ6ZRI0 2925 aa4.82□□□□□ -1.64
CCNK-203ENST00000553865 XP32Q5T750 250 aa4.81□□□□□ -1.64
CCNK-203ENST00000553865 BSNQ9UPA5 3926 aa4.79□□□□□ -1.64
CCNK-203ENST00000553865 TENM1Q9UKZ4 2725 aa4.77□□□□□ -1.65
CCNK-203ENST00000553865 TPRXLQ17RH7 258 aa4.77□□□□□ -1.65
CCNK-203ENST00000553865 TENM3Q9P273 2699 aa4.76□□□□□ -1.65
CCNK-203ENST00000553865 FBN1P35555 2871 aaKnown RBP4.74□□□□□ -1.65
CCNK-203ENST00000553865 PKD1L1Q8TDX9 2849 aa4.74□□□□□ -1.65
CCNK-203ENST00000553865 KRTAP13-3Q3SY46 172 aa4.73□□□□□ -1.65
CCNK-203ENST00000553865 PRO2289Q9P1D8 64 aa4.72□□□□□ -1.65
CCNK-203ENST00000553865 CSMD2Q7Z408 3487 aa4.71□□□□□ -1.66
CCNK-203ENST00000553865 VWFP04275 2813 aa4.68□□□□□ -1.66
CCNK-203ENST00000553865 ZFHX3Q15911 3703 aa4.66□□□□□ -1.66
CCNK-203ENST00000553865 TENM2Q9NT68 2774 aa4.63□□□□□ -1.67
CCNK-203ENST00000553865 TGP01266 2768 aa4.63□□□□□ -1.67
CCNK-203ENST00000553865 VPS13CQ709C8 3753 aa4.62□□□□□ -1.67
CCNK-203ENST00000553865 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
CCNK-203ENST00000553865 ALMS1Q8TCU4 4167 aa4.61□□□□□ -1.67
CCNK-203ENST00000553865 NBPF19A0A087WUL8 3843 aa4.59□□□□□ -1.67
CCNK-203ENST00000553865 HUWE1Q7Z6Z7 4374 aaKnown RBP4.55□□□□□ -1.68
CCNK-203ENST00000553865 KRTAP12-2P59991 146 aa4.54□□□□□ -1.68
CCNK-203ENST00000553865 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
CCNK-203ENST00000553865 AKAP9Q99996 3911 aa4.5□□□□□ -1.69
CCNK-203ENST00000553865 SRRM2Q9UQ35 2752 aaKnown RBP4.49□□□□□ -1.69
CCNK-203ENST00000553865 INE1O15225 51 aa4.48□□□□□ -1.69
CCNK-203ENST00000553865 KRTAP10-4P60372 401 aaPredicted RBP4.46□□□□□ -1.69
CCNK-203ENST00000553865 TRRAPQ9Y4A5 3859 aa4.46□□□□□ -1.7
CCNK-203ENST00000553865 KRTAP3-1Q9BYR8 98 aa4.45□□□□□ -1.7
CCNK-203ENST00000553865 FBN3Q75N90 2809 aa4.43□□□□□ -1.7
CCNK-203ENST00000553865 DNAH9Q9NYC9 4486 aa4.43□□□□□ -1.7
CCNK-203ENST00000553865 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
CCNK-203ENST00000553865 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
CCNK-203ENST00000553865 ZNF469Q96JG9 3925 aaPredicted RBP4.4□□□□□ -1.71
CCNK-203ENST00000553865 MT1HL1P0DM35 61 aa4.39□□□□□ -1.71
CCNK-203ENST00000553865 KRTAP10-6P60371 365 aaPredicted RBP4.32□□□□□ -1.72
CCNK-203ENST00000553865 DNAH6Q9C0G6 4158 aa4.29□□□□□ -1.72
CCNK-203ENST00000553865 VPS13DQ5THJ4 4388 aa4.29□□□□□ -1.72
CCNK-203ENST00000553865 ANK2Q01484 3957 aa4.28□□□□□ -1.72
CCNK-203ENST00000553865 DNAH3Q8TD57 4116 aa4.27□□□□□ -1.73
CCNK-203ENST00000553865 DNAH10Q8IVF4 4471 aa4.27□□□□□ -1.73
CCNK-203ENST00000553865 DNAH1Q9P2D7 4330 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms