RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CELSR1Q9NYQ6 3014 aa9.53□□□□□ -0.88
RBFOX1-212ENST00000550418 LCE6AA0A183 80 aa9.53□□□□□ -0.88
RBFOX1-212ENST00000550418 ASB16-AS1Q495Z4 193 aa9.53□□□□□ -0.88
RBFOX1-212ENST00000550418 FLG2Q5D862 2391 aaPredicted RBP9.53□□□□□ -0.88
RBFOX1-212ENST00000550418 LUZP6Q538Z0 58 aa9.51□□□□□ -0.89
RBFOX1-212ENST00000550418 CSMD1Q96PZ7 3565 aa9.51□□□□□ -0.89
RBFOX1-212ENST00000550418 A6NN06 94 aa9.5□□□□□ -0.89
RBFOX1-212ENST00000550418 PLAC8Q9NZF1 115 aa9.49□□□□□ -0.89
RBFOX1-212ENST00000550418 DMBT1Q9UGM3 2413 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-212ENST00000550418 SVEP1Q4LDE5 3571 aa9.45□□□□□ -0.9
RBFOX1-212ENST00000550418 KRTAP1-5Q9BYS1 174 aa9.44□□□□□ -0.9
RBFOX1-212ENST00000550418 A8MU10 97 aa9.41□□□□□ -0.9
RBFOX1-212ENST00000550418 SPATA8Q6RVD6 105 aa9.41□□□□□ -0.9
RBFOX1-212ENST00000550418 COX6B2Q6YFQ2 88 aa9.39□□□□□ -0.91
RBFOX1-212ENST00000550418 KRTAP21-3Q3LHN1 58 aa9.38□□□□□ -0.91
RBFOX1-212ENST00000550418 CUBNO60494 3623 aa9.38□□□□□ -0.91
RBFOX1-212ENST00000550418 LINC00483Q53H64 154 aa9.37□□□□□ -0.91
RBFOX1-212ENST00000550418 RPL37P61927 97 aaKnown RBP9.33□□□□□ -0.92
RBFOX1-212ENST00000550418 ROMO1P60602 79 aa9.33□□□□□ -0.92
RBFOX1-212ENST00000550418 A0A087X002 238 aa9.31□□□□□ -0.92
RBFOX1-212ENST00000550418 NOTCH2NLQ7Z3S9 236 aa9.31□□□□□ -0.92
RBFOX1-212ENST00000550418 H1FX-AS1Q4G0G2 97 aa9.31□□□□□ -0.92
RBFOX1-212ENST00000550418 TENM1Q9UKZ4 2725 aa9.29□□□□□ -0.92
RBFOX1-212ENST00000550418 SPENQ96T58 3664 aaKnown RBP9.27□□□□□ -0.93
RBFOX1-212ENST00000550418 ADM2Q7Z4H4 148 aa9.27□□□□□ -0.93
RBFOX1-212ENST00000550418 PANO1I0J062 215 aa9.26□□□□□ -0.93
RBFOX1-212ENST00000550418 FBN1P35555 2871 aaKnown RBP9.24□□□□□ -0.93
RBFOX1-212ENST00000550418 KRTAP7-1Q8IUC3 87 aa9.23□□□□□ -0.93
RBFOX1-212ENST00000550418 OTOGQ6ZRI0 2925 aa9.23□□□□□ -0.93
RBFOX1-212ENST00000550418 S4R3F8 94 aa9.23□□□□□ -0.93
RBFOX1-212ENST00000550418 CAMK2N1Q7Z7J9 78 aa9.23□□□□□ -0.93
RBFOX1-212ENST00000550418 NBPF19A0A087WUL8 3843 aa9.22□□□□□ -0.93
RBFOX1-212ENST00000550418 A0A0A0MQY5 61 aa9.22□□□□□ -0.93
RBFOX1-212ENST00000550418 TENM3Q9P273 2699 aa9.21□□□□□ -0.93
RBFOX1-212ENST00000550418 Q6ZSA8 131 aa9.2□□□□□ -0.94
RBFOX1-212ENST00000550418 CSMD2Q7Z408 3487 aa9.2□□□□□ -0.94
RBFOX1-212ENST00000550418 VWFP04275 2813 aa9.2□□□□□ -0.94
RBFOX1-212ENST00000550418 KRTAP11-1Q8IUC1 163 aa9.19□□□□□ -0.94
RBFOX1-212ENST00000550418 ZFHX3Q15911 3703 aa9.19□□□□□ -0.94
RBFOX1-212ENST00000550418 KRTAP25-1Q3LHN0 102 aa9.18□□□□□ -0.94
RBFOX1-212ENST00000550418 PDZD2O15018 2839 aa9.16□□□□□ -0.94
RBFOX1-212ENST00000550418 Q5VSD8 79 aa9.1□□□□□ -0.95
RBFOX1-212ENST00000550418 PKD1L1Q8TDX9 2849 aa9.09□□□□□ -0.95
RBFOX1-212ENST00000550418 R4GN34 69 aa9.08□□□□□ -0.96
RBFOX1-212ENST00000550418 BSNQ9UPA5 3926 aa9.03□□□□□ -0.96
RBFOX1-212ENST00000550418 KRTAP16-1A8MUX0 517 aa9.03□□□□□ -0.96
RBFOX1-212ENST00000550418 KRTAP10-1P60331 282 aa9.03□□□□□ -0.96
RBFOX1-212ENST00000550418 KRTAP13-1Q8IUC0 172 aa9.02□□□□□ -0.97
RBFOX1-212ENST00000550418 KRTAP10-2P60368 255 aa9.02□□□□□ -0.97
RBFOX1-212ENST00000550418 M0R2T5 61 aa8.94□□□□□ -0.98
RBFOX1-212ENST00000550418 M0QZ58 72 aa8.93□□□□□ -0.98
RBFOX1-212ENST00000550418 NDUFAF8A1L188 74 aa8.92□□□□□ -0.98
RBFOX1-212ENST00000550418 Q6ZRN7 208 aaPredicted RBP8.91□□□□□ -0.98
RBFOX1-212ENST00000550418 TGP01266 2768 aa8.86□□□□□ -0.99
RBFOX1-212ENST00000550418 KRTAP13-2Q52LG2 175 aa8.85□□□□□ -0.99
RBFOX1-212ENST00000550418 A8MUU9 505 aa8.84□□□□□ -0.99
RBFOX1-212ENST00000550418 TENM2Q9NT68 2774 aa8.84□□□□□ -0.99
RBFOX1-212ENST00000550418 RPS29P62273 56 aaKnown RBP8.81□□□□□ -1
RBFOX1-212ENST00000550418 SEC61BP60468 96 aaKnown RBP8.8□□□□□ -1
RBFOX1-212ENST00000550418 TRRAPQ9Y4A5 3859 aa8.73□□□□□ -1.01
RBFOX1-212ENST00000550418 VPS13CQ709C8 3753 aa8.66□□□□□ -1.02
RBFOX1-212ENST00000550418 H0YAA0 97 aa8.63□□□□□ -1.03
RBFOX1-212ENST00000550418 PLAC4Q8WY50 150 aa8.6□□□□□ -1.03
RBFOX1-212ENST00000550418 C20orf166-AS1Q96NR2 134 aa8.59□□□□□ -1.03
RBFOX1-212ENST00000550418 ANK3Q12955 4377 aaKnown RBP8.59□□□□□ -1.03
RBFOX1-212ENST00000550418 SRRM2Q9UQ35 2752 aaKnown RBP8.56□□□□□ -1.04
RBFOX1-212ENST00000550418 C10orf95Q9H7T3 257 aa8.54□□□□□ -1.04
RBFOX1-212ENST00000550418 ZNF469Q96JG9 3925 aaPredicted RBP8.45□□□□□ -1.06
RBFOX1-212ENST00000550418 KRTAP1-4P0C5Y4 121 aa8.42□□□□□ -1.06
RBFOX1-212ENST00000550418 KRTAP13-3Q3SY46 172 aa8.4□□□□□ -1.06
RBFOX1-212ENST00000550418 FBN3Q75N90 2809 aa8.39□□□□□ -1.07
RBFOX1-212ENST00000550418 P0C880 135 aa8.38□□□□□ -1.07
RBFOX1-212ENST00000550418 TNP1P09430 55 aa8.32□□□□□ -1.08
RBFOX1-212ENST00000550418 PP632Q6XCG6 107 aa8.3□□□□□ -1.08
RBFOX1-212ENST00000550418 COL7A1Q02388 2944 aa8.24□□□□□ -1.09
RBFOX1-212ENST00000550418 MEGF8Q7Z7M0 2845 aa8.22□□□□□ -1.09
RBFOX1-212ENST00000550418 XP32Q5T750 250 aa8.18□□□□□ -1.1
RBFOX1-212ENST00000550418 KRTAP10-8P60410 259 aa8.16□□□□□ -1.1
RBFOX1-212ENST00000550418 CSMD3Q7Z407 3707 aa8.04□□□□□ -1.12
RBFOX1-212ENST00000550418 AKAP9Q99996 3911 aa8.03□□□□□ -1.12
RBFOX1-212ENST00000550418 TPRXLQ17RH7 258 aa8□□□□□ -1.13
RBFOX1-212ENST00000550418 KRTAP12-2P59991 146 aa7.97□□□□□ -1.13
RBFOX1-212ENST00000550418 A0A1B0GVY2 172 aa7.95□□□□□ -1.14
RBFOX1-212ENST00000550418 KRTAP3-1Q9BYR8 98 aa7.9□□□□□ -1.15
RBFOX1-212ENST00000550418 HUWE1Q7Z6Z7 4374 aaKnown RBP7.9□□□□□ -1.15
RBFOX1-212ENST00000550418 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
RBFOX1-212ENST00000550418 KRTAP13-4Q3LI77 160 aa7.74□□□□□ -1.17
RBFOX1-212ENST00000550418 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
RBFOX1-212ENST00000550418 DNHD1Q96M86 4753 aa7.68□□□□□ -1.18
RBFOX1-212ENST00000550418 DNAH9Q9NYC9 4486 aa7.66□□□□□ -1.18
RBFOX1-212ENST00000550418 KRTAP15-1Q3LI76 137 aa7.61□□□□□ -1.19
RBFOX1-212ENST00000550418 KRTAP10-10P60014 251 aa7.61□□□□□ -1.19
RBFOX1-212ENST00000550418 PLECQ15149 4684 aaKnown RBP7.57□□□□□ -1.2
RBFOX1-212ENST00000550418 DNAH10Q8IVF4 4471 aa7.48□□□□□ -1.21
RBFOX1-212ENST00000550418 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
RBFOX1-212ENST00000550418 DNAH11Q96DT5 4516 aa7.44□□□□□ -1.22
RBFOX1-212ENST00000550418 PRO2289Q9P1D8 64 aa7.43□□□□□ -1.22
RBFOX1-212ENST00000550418 DNAH1Q9P2D7 4330 aa7.41□□□□□ -1.22
RBFOX1-212ENST00000550418 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.23
RBFOX1-212ENST00000550418 DNAH5Q8TE73 4624 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms