RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 KRTAP25-1Q3LHN0 102 aa3.38□□□□□ -1.87
TGFBR1-208ENST00000550253 AMELXQ99217 191 aa3.38□□□□□ -1.87
TGFBR1-208ENST00000550253 LIMD2Q9BT23 127 aa3.38□□□□□ -1.87
TGFBR1-208ENST00000550253 LINC00846Q9NV44 126 aa3.38□□□□□ -1.87
TGFBR1-208ENST00000550253 TRAV23DV6A0A075B6W5 121 aa3.37□□□□□ -1.87
TGFBR1-208ENST00000550253 C10orf113Q5VZT2 155 aa3.37□□□□□ -1.87
TGFBR1-208ENST00000550253 LYZL1Q6UWQ5 148 aa3.37□□□□□ -1.87
TGFBR1-208ENST00000550253 PATE2Q6UY27 113 aa3.37□□□□□ -1.87
TGFBR1-208ENST00000550253 WFDC10BQ8IUB3 73 aa3.37□□□□□ -1.87
TGFBR1-208ENST00000550253 C1orf64Q8NEQ6 169 aa3.37□□□□□ -1.87
TGFBR1-208ENST00000550253 TMEM14CQ9P0S9 112 aa3.37□□□□□ -1.87
TGFBR1-208ENST00000550253 NDUFA12Q9UI09 145 aa3.37□□□□□ -1.87
TGFBR1-208ENST00000550253 R4GN34 69 aa3.37□□□□□ -1.87
TGFBR1-208ENST00000550253 TMEM254Q8TBM7 123 aa3.36□□□□□ -1.87
TGFBR1-208ENST00000550253 UBL5Q9BZL1 73 aa3.36□□□□□ -1.87
TGFBR1-208ENST00000550253 TRAV12-3A0A0B4J271 114 aa3.35□□□□□ -1.87
TGFBR1-208ENST00000550253 HCG22E2RYF7 251 aa3.35□□□□□ -1.87
TGFBR1-208ENST00000550253 CDC42SE1Q9NRR8 79 aa3.35□□□□□ -1.87
TGFBR1-208ENST00000550253 SNURFQ9Y675 71 aa3.35□□□□□ -1.87
TGFBR1-208ENST00000550253 A0A1B0GW54 56 aa3.34□□□□□ -1.87
TGFBR1-208ENST00000550253 JMJD7-PLA2G4BH0Y9G9 81 aa3.34□□□□□ -1.87
TGFBR1-208ENST00000550253 PDE6HQ13956 83 aa3.34□□□□□ -1.87
TGFBR1-208ENST00000550253 MIAQ16674 131 aa3.34□□□□□ -1.87
TGFBR1-208ENST00000550253 PRR9Q5T870 116 aa3.34□□□□□ -1.87
TGFBR1-208ENST00000550253 Q6ZSA8 131 aa3.34□□□□□ -1.87
TGFBR1-208ENST00000550253 LINC00467Q9BRT7 94 aa3.34□□□□□ -1.87
TGFBR1-208ENST00000550253 TRGV2A0A075B6R0 118 aa3.34□□□□□ -1.88
TGFBR1-208ENST00000550253 TRGV1A0A0A0MS02 117 aa3.34□□□□□ -1.88
TGFBR1-208ENST00000550253 Q5VV11 94 aa3.34□□□□□ -1.88
TGFBR1-208ENST00000550253 Q8N814 137 aa3.34□□□□□ -1.88
TGFBR1-208ENST00000550253 SMIM2Q9BVW6 85 aa3.34□□□□□ -1.88
TGFBR1-208ENST00000550253 C22orf24Q9Y442 160 aa3.34□□□□□ -1.88
TGFBR1-208ENST00000550253 TNXBP22105 4242 aa3.33□□□□□ -1.88
TGFBR1-208ENST00000550253 TRBV6-8A0A0A6YYG3 113 aa3.33□□□□□ -1.88
TGFBR1-208ENST00000550253 ENHOQ6UWT2 76 aa3.33□□□□□ -1.88
TGFBR1-208ENST00000550253 SPTSSBQ8NFR3 76 aa3.33□□□□□ -1.88
TGFBR1-208ENST00000550253 DEFB104AQ8WTQ1 72 aa3.33□□□□□ -1.88
TGFBR1-208ENST00000550253 H0YGX0 51 aa3.32□□□□□ -1.88
TGFBR1-208ENST00000550253 C9orf116Q5BN46 136 aaPredicted RBP3.32□□□□□ -1.88
TGFBR1-208ENST00000550253 IGFL1Q6UW32 110 aa3.32□□□□□ -1.88
TGFBR1-208ENST00000550253 PRO0255Q9UI72 69 aa3.32□□□□□ -1.88
TGFBR1-208ENST00000550253 CHKB-CPT1BH3BT56 60 aa3.31□□□□□ -1.88
TGFBR1-208ENST00000550253 PSCAO43653 123 aa3.31□□□□□ -1.88
TGFBR1-208ENST00000550253 MT1HL1P0DM35 61 aa3.31□□□□□ -1.88
TGFBR1-208ENST00000550253 HRES1P13985 223 aa3.31□□□□□ -1.88
TGFBR1-208ENST00000550253 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
TGFBR1-208ENST00000550253 NREPQ16612 68 aa3.31□□□□□ -1.88
TGFBR1-208ENST00000550253 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
TGFBR1-208ENST00000550253 LPAP08519 4548 aa3.31□□□□□ -1.88
TGFBR1-208ENST00000550253 C14orf132Q9NPU4 83 aa3.3□□□□□ -1.88
TGFBR1-208ENST00000550253 LOC101927531A0A1B0GV80 90 aa3.29□□□□□ -1.88
TGFBR1-208ENST00000550253 CRIP1P50238 77 aa3.29□□□□□ -1.88
TGFBR1-208ENST00000550253 ELOF1P60002 83 aaKnown RBP3.29□□□□□ -1.88
TGFBR1-208ENST00000550253 MUC2Q02817 5179 aa3.29□□□□□ -1.88
TGFBR1-208ENST00000550253 IGKV2-40A0A087WW87 121 aaPredicted RBP3.29□□□□□ -1.88
TGFBR1-208ENST00000550253 IGHV3-73A0A0B4J1V6 119 aa3.29□□□□□ -1.88
TGFBR1-208ENST00000550253 TRGV4A0A0C4DH28 118 aa3.29□□□□□ -1.88
TGFBR1-208ENST00000550253 IGKV2D-40P01614 121 aaPredicted RBP3.29□□□□□ -1.88
TGFBR1-208ENST00000550253 LINC01556Q5JQF7 62 aa3.29□□□□□ -1.88
TGFBR1-208ENST00000550253 CASC2Q6XLA1 102 aa3.29□□□□□ -1.88
TGFBR1-208ENST00000550253 Q8TAT8 98 aa3.29□□□□□ -1.88
TGFBR1-208ENST00000550253 CDC42SE2Q9NRR3 84 aa3.29□□□□□ -1.88
TGFBR1-208ENST00000550253 NDUFB1O75438 58 aa3.28□□□□□ -1.88
TGFBR1-208ENST00000550253 PDE6GP18545 87 aa3.28□□□□□ -1.88
TGFBR1-208ENST00000550253 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
TGFBR1-208ENST00000550253 ORMDL1Q9P0S3 153 aa3.27□□□□□ -1.89
TGFBR1-208ENST00000550253 FAM74A4Q5TZK3 123 aa3.26□□□□□ -1.89
TGFBR1-208ENST00000550253 ZNF625Q96I27 306 aaPredicted RBP3.26□□□□□ -1.89
TGFBR1-208ENST00000550253 XAGE1AQ9HD64 81 aa3.26□□□□□ -1.89
TGFBR1-208ENST00000550253 TRAV21A0A0B4J279 112 aa3.25□□□□□ -1.89
TGFBR1-208ENST00000550253 RETNLBQ9BQ08 111 aa3.25□□□□□ -1.89
TGFBR1-208ENST00000550253 Q9BRP9 147 aa3.25□□□□□ -1.89
TGFBR1-208ENST00000550253 HIGD2AQ9BW72 106 aa3.25□□□□□ -1.89
TGFBR1-208ENST00000550253 LOC110117498A0A087WWA1 95 aa3.24□□□□□ -1.89
TGFBR1-208ENST00000550253 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
TGFBR1-208ENST00000550253 NDUFA1O15239 70 aa3.24□□□□□ -1.89
TGFBR1-208ENST00000550253 KRTAP10-7P60409 375 aaPredicted RBP3.24□□□□□ -1.89
TGFBR1-208ENST00000550253 RPL37AP61513 92 aaKnown RBP3.24□□□□□ -1.89
TGFBR1-208ENST00000550253 LELP1Q5T871 98 aa3.24□□□□□ -1.89
TGFBR1-208ENST00000550253 LINC00308Q8TCZ7 52 aa3.24□□□□□ -1.89
TGFBR1-208ENST00000550253 PRR15LQ9BU68 103 aa3.24□□□□□ -1.89
TGFBR1-208ENST00000550253 ZCCHC13Q8WW36 166 aaKnown RBP3.22□□□□□ -1.89
TGFBR1-208ENST00000550253 TRBV6-5A0A0K0K1A5 114 aa3.21□□□□□ -1.9
TGFBR1-208ENST00000550253 TRBV6-4A0A1B0GX49 114 aa3.21□□□□□ -1.9
TGFBR1-208ENST00000550253 A0A1W2PNM2 257 aa3.21□□□□□ -1.9
TGFBR1-208ENST00000550253 NCR3O14931 201 aa3.21□□□□□ -1.9
TGFBR1-208ENST00000550253 CRPP02741 224 aa3.21□□□□□ -1.9
TGFBR1-208ENST00000550253 TRBV10-1A0A0K0K1A3 114 aa3.2□□□□□ -1.9
TGFBR1-208ENST00000550253 H3BPC8 53 aa3.2□□□□□ -1.9
TGFBR1-208ENST00000550253 POLR2KP53803 58 aaKnown RBP3.2□□□□□ -1.9
TGFBR1-208ENST00000550253 FAT4Q6V0I7 4981 aa3.19□□□□□ -1.9
TGFBR1-208ENST00000550253 A0A1W2PNN7 141 aa3.19□□□□□ -1.9
TGFBR1-208ENST00000550253 RNASE3P12724 160 aaKnown RBP3.19□□□□□ -1.9
TGFBR1-208ENST00000550253 Q6ZQT0 140 aa3.19□□□□□ -1.9
TGFBR1-208ENST00000550253 LENEPQ9Y5L5 61 aa3.19□□□□□ -1.9
TGFBR1-208ENST00000550253 IGKV2-29A2NJV5 120 aaPredicted RBP3.19□□□□□ -1.9
TGFBR1-208ENST00000550253 LINC00208Q96KT6 92 aa3.19□□□□□ -1.9
TGFBR1-208ENST00000550253 LINC01558Q9Y6Z2 57 aa3.19□□□□□ -1.9
TGFBR1-208ENST00000550253 KRTAP26-1Q6PEX3 210 aa3.18□□□□□ -1.9
TGFBR1-208ENST00000550253 C9orf163Q8N9P6 203 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms