RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 PANO1I0J062 215 aa7.55□□□□□ -1.2
SMG8-202ENST00000543872 C1orf134Q5TEV5 83 aa7.54□□□□□ -1.2
SMG8-202ENST00000543872 STAB2Q8WWQ8 2551 aa7.53□□□□□ -1.2
SMG8-202ENST00000543872 MIR22HGQ0VDD5 57 aa7.53□□□□□ -1.2
SMG8-202ENST00000543872 UBE2DNLQ8IWF7 75 aa7.53□□□□□ -1.2
SMG8-202ENST00000543872 SPATA8Q6RVD6 105 aa7.51□□□□□ -1.21
SMG8-202ENST00000543872 DNAH1Q9P2D7 4330 aa7.5□□□□□ -1.21
SMG8-202ENST00000543872 UQCR11O14957 56 aa7.48□□□□□ -1.21
SMG8-202ENST00000543872 KRTAP13-1Q8IUC0 172 aa7.48□□□□□ -1.21
SMG8-202ENST00000543872 C14orf177Q52M58 125 aa7.47□□□□□ -1.21
SMG8-202ENST00000543872 DMAC1Q96GE9 116 aa7.45□□□□□ -1.22
SMG8-202ENST00000543872 WWC2-AS2Q96NR7 200 aa7.45□□□□□ -1.22
SMG8-202ENST00000543872 LYSTQ99698 3801 aa7.44□□□□□ -1.22
SMG8-202ENST00000543872 CIRBP-AS1Q8TBR5 109 aa7.44□□□□□ -1.22
SMG8-202ENST00000543872 MGAM2Q2M2H8 2515 aa7.44□□□□□ -1.22
SMG8-202ENST00000543872 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.44□□□□□ -1.22
SMG8-202ENST00000543872 KRTAP13-3Q3SY46 172 aa7.43□□□□□ -1.22
SMG8-202ENST00000543872 ALMS1Q8TCU4 4167 aa7.41□□□□□ -1.22
SMG8-202ENST00000543872 ROMO1P60602 79 aa7.4□□□□□ -1.22
SMG8-202ENST00000543872 DNAH9Q9NYC9 4486 aa7.4□□□□□ -1.23
SMG8-202ENST00000543872 ZNF861PO60384 105 aa7.39□□□□□ -1.23
SMG8-202ENST00000543872 LINC00483Q53H64 154 aa7.39□□□□□ -1.23
SMG8-202ENST00000543872 SPINK1P00995 79 aa7.39□□□□□ -1.23
SMG8-202ENST00000543872 PSORS1C2Q9UIG4 136 aa7.38□□□□□ -1.23
SMG8-202ENST00000543872 IGKV2D-30A0A075B6S6 120 aa7.37□□□□□ -1.23
SMG8-202ENST00000543872 IGKV2-30P06310 120 aa7.37□□□□□ -1.23
SMG8-202ENST00000543872 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
SMG8-202ENST00000543872 FAM229AH3BQW9 127 aa7.34□□□□□ -1.23
SMG8-202ENST00000543872 SPACA4Q8TDM5 124 aa7.32□□□□□ -1.24
SMG8-202ENST00000543872 TGP01266 2768 aa7.31□□□□□ -1.24
SMG8-202ENST00000543872 HUWE1Q7Z6Z7 4374 aaKnown RBP7.31□□□□□ -1.24
SMG8-202ENST00000543872 KRTAP24-1Q3LI83 254 aa7.31□□□□□ -1.24
SMG8-202ENST00000543872 IGLV5-52A0A0A0MRZ9 124 aa7.29□□□□□ -1.24
SMG8-202ENST00000543872 KRTAP25-1Q3LHN0 102 aa7.29□□□□□ -1.24
SMG8-202ENST00000543872 APLNQ9ULZ1 77 aa7.28□□□□□ -1.24
SMG8-202ENST00000543872 NBDYA0A0U1RRE5 68 aa7.27□□□□□ -1.25
SMG8-202ENST00000543872 P0C880 135 aa7.26□□□□□ -1.25
SMG8-202ENST00000543872 DNAH8Q96JB1 4490 aa7.25□□□□□ -1.25
SMG8-202ENST00000543872 IGLV7-43P04211 117 aa7.25□□□□□ -1.25
SMG8-202ENST00000543872 MEGF8Q7Z7M0 2845 aa7.24□□□□□ -1.25
SMG8-202ENST00000543872 FRAS1Q86XX4 4008 aa7.24□□□□□ -1.25
SMG8-202ENST00000543872 Q8N1X5 172 aa7.23□□□□□ -1.25
SMG8-202ENST00000543872 CMYA5Q8N3K9 4069 aa7.23□□□□□ -1.25
SMG8-202ENST00000543872 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
SMG8-202ENST00000543872 Q6ZRN7 208 aaPredicted RBP7.21□□□□□ -1.26
SMG8-202ENST00000543872 A8MUU9 505 aa7.2□□□□□ -1.26
SMG8-202ENST00000543872 FBN3Q75N90 2809 aa7.18□□□□□ -1.26
SMG8-202ENST00000543872 DNAH7Q8WXX0 4024 aa7.18□□□□□ -1.26
SMG8-202ENST00000543872 A0A087WTM6 91 aa7.18□□□□□ -1.26
SMG8-202ENST00000543872 LINC00304Q8N9R0 145 aa7.16□□□□□ -1.26
SMG8-202ENST00000543872 SSBP3-AS1Q7Z2R9 100 aa7.15□□□□□ -1.26
SMG8-202ENST00000543872 Q6ZSA8 131 aa7.13□□□□□ -1.27
SMG8-202ENST00000543872 DNAH3Q8TD57 4116 aa7.13□□□□□ -1.27
SMG8-202ENST00000543872 H0YAA0 97 aa7.13□□□□□ -1.27
SMG8-202ENST00000543872 PLECQ15149 4684 aaKnown RBP7.11□□□□□ -1.27
SMG8-202ENST00000543872 DNAH17Q9UFH2 4485 aa7.11□□□□□ -1.27
SMG8-202ENST00000543872 KRTAP16-1A8MUX0 517 aa7.11□□□□□ -1.27
SMG8-202ENST00000543872 A0A0A0MQY5 61 aa7.1□□□□□ -1.27
SMG8-202ENST00000543872 LY6G6CO95867 125 aa7.1□□□□□ -1.27
SMG8-202ENST00000543872 TYMSOSQ8TAI1 123 aa7.09□□□□□ -1.27
SMG8-202ENST00000543872 DMBT1Q9UGM3 2413 aaPredicted RBP7.08□□□□□ -1.28
SMG8-202ENST00000543872 A0A1B0GU33 70 aa7.06□□□□□ -1.28
SMG8-202ENST00000543872 KRTAP13-2Q52LG2 175 aa7.05□□□□□ -1.28
SMG8-202ENST00000543872 NDUFAF8A1L188 74 aa7.02□□□□□ -1.29
SMG8-202ENST00000543872 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
SMG8-202ENST00000543872 HECTD4Q9Y4D8 3996 aa7□□□□□ -1.29
SMG8-202ENST00000543872 NUPR2A6NF83 97 aa6.99□□□□□ -1.29
SMG8-202ENST00000543872 H1FX-AS1Q4G0G2 97 aa6.97□□□□□ -1.29
SMG8-202ENST00000543872 K7ERS5 55 aa6.97□□□□□ -1.29
SMG8-202ENST00000543872 C20orf166-AS1Q96NR2 134 aa6.93□□□□□ -1.3
SMG8-202ENST00000543872 VPS13DQ5THJ4 4388 aa6.93□□□□□ -1.3
SMG8-202ENST00000543872 DNAH2Q9P225 4427 aa6.91□□□□□ -1.3
SMG8-202ENST00000543872 DNHD1Q96M86 4753 aa6.9□□□□□ -1.3
SMG8-202ENST00000543872 KRTAP21-3Q3LHN1 58 aa6.9□□□□□ -1.31
SMG8-202ENST00000543872 KMT2AQ03164 3969 aa6.89□□□□□ -1.31
SMG8-202ENST00000543872 STARD9Q9P2P6 4700 aa6.88□□□□□ -1.31
SMG8-202ENST00000543872 DYNC2H1Q8NCM8 4307 aaKnown RBP6.87□□□□□ -1.31
SMG8-202ENST00000543872 C9orf92A6NGG3 77 aa6.87□□□□□ -1.31
SMG8-202ENST00000543872 DNAH11Q96DT5 4516 aa6.87□□□□□ -1.31
SMG8-202ENST00000543872 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
SMG8-202ENST00000543872 KRTAP3-1Q9BYR8 98 aa6.85□□□□□ -1.31
SMG8-202ENST00000543872 COX6B2Q6YFQ2 88 aa6.85□□□□□ -1.31
SMG8-202ENST00000543872 DNAH6Q9C0G6 4158 aa6.84□□□□□ -1.32
SMG8-202ENST00000543872 A0A0D9SG42 100 aa6.83□□□□□ -1.32
SMG8-202ENST00000543872 KRTAP1-4P0C5Y4 121 aa6.83□□□□□ -1.32
SMG8-202ENST00000543872 LRP1BQ9NZR2 4599 aa6.82□□□□□ -1.32
SMG8-202ENST00000543872 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
SMG8-202ENST00000543872 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
SMG8-202ENST00000543872 C10orf95Q9H7T3 257 aa6.79□□□□□ -1.32
SMG8-202ENST00000543872 KRTAP10-1P60331 282 aa6.76□□□□□ -1.33
SMG8-202ENST00000543872 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
SMG8-202ENST00000543872 DNAH5Q8TE73 4624 aa6.71□□□□□ -1.34
SMG8-202ENST00000543872 VPS13BQ7Z7G8 4022 aa6.67□□□□□ -1.34
SMG8-202ENST00000543872 KRTAP13-4Q3LI77 160 aa6.66□□□□□ -1.34
SMG8-202ENST00000543872 PRKDCP78527 4128 aaKnown RBP6.63□□□□□ -1.35
SMG8-202ENST00000543872 LUZP6Q538Z0 58 aa6.63□□□□□ -1.35
SMG8-202ENST00000543872 KRTAP10-6P60371 365 aaPredicted RBP6.6□□□□□ -1.35
SMG8-202ENST00000543872 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
SMG8-202ENST00000543872 J3QL48 77 aa6.52□□□□□ -1.37
SMG8-202ENST00000543872 S4R3F8 94 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms