RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 LCE6AA0A183 80 aa4.97□□□□□ -1.61
PRKAB1-207ENST00000542698 VWFP04275 2813 aa4.97□□□□□ -1.61
PRKAB1-207ENST00000542698 WWC2-AS2Q96NR7 200 aa4.96□□□□□ -1.61
PRKAB1-207ENST00000542698 PLAC8Q9NZF1 115 aa4.96□□□□□ -1.61
PRKAB1-207ENST00000542698 LINC01558Q9Y6Z2 57 aa4.96□□□□□ -1.61
PRKAB1-207ENST00000542698 TENM1Q9UKZ4 2725 aa4.96□□□□□ -1.62
PRKAB1-207ENST00000542698 MIR22HGQ0VDD5 57 aa4.96□□□□□ -1.62
PRKAB1-207ENST00000542698 PANO1I0J062 215 aa4.95□□□□□ -1.62
PRKAB1-207ENST00000542698 HRES1P13985 223 aa4.95□□□□□ -1.62
PRKAB1-207ENST00000542698 KRTAP11-1Q8IUC1 163 aa4.94□□□□□ -1.62
PRKAB1-207ENST00000542698 LINC00304Q8N9R0 145 aa4.92□□□□□ -1.62
PRKAB1-207ENST00000542698 LINC00483Q53H64 154 aa4.91□□□□□ -1.62
PRKAB1-207ENST00000542698 Q6ZR54 194 aa4.91□□□□□ -1.62
PRKAB1-207ENST00000542698 LCA10Q71F78 164 aa4.9□□□□□ -1.63
PRKAB1-207ENST00000542698 Q8N1X5 172 aa4.88□□□□□ -1.63
PRKAB1-207ENST00000542698 DMBT1Q9UGM3 2413 aaPredicted RBP4.88□□□□□ -1.63
PRKAB1-207ENST00000542698 SPINK7P58062 85 aa4.88□□□□□ -1.63
PRKAB1-207ENST00000542698 Q5W150 140 aa4.88□□□□□ -1.63
PRKAB1-207ENST00000542698 C9orf92A6NGG3 77 aa4.87□□□□□ -1.63
PRKAB1-207ENST00000542698 SMR3BP02814 79 aaPredicted RBP4.87□□□□□ -1.63
PRKAB1-207ENST00000542698 FBN1P35555 2871 aaKnown RBP4.86□□□□□ -1.63
PRKAB1-207ENST00000542698 TRRAPQ9Y4A5 3859 aa4.86□□□□□ -1.63
PRKAB1-207ENST00000542698 A0A087X002 238 aa4.86□□□□□ -1.63
PRKAB1-207ENST00000542698 NOTCH2NLQ7Z3S9 236 aa4.86□□□□□ -1.63
PRKAB1-207ENST00000542698 RBM12B-AS1Q9P1G2 102 aa4.85□□□□□ -1.63
PRKAB1-207ENST00000542698 Q6ZRN7 208 aaPredicted RBP4.85□□□□□ -1.63
PRKAB1-207ENST00000542698 KRTAP13-1Q8IUC0 172 aa4.84□□□□□ -1.63
PRKAB1-207ENST00000542698 PKD1L1Q8TDX9 2849 aa4.84□□□□□ -1.63
PRKAB1-207ENST00000542698 DMAC1Q96GE9 116 aa4.81□□□□□ -1.64
PRKAB1-207ENST00000542698 KRTAP10-2P60368 255 aa4.79□□□□□ -1.64
PRKAB1-207ENST00000542698 A8MU10 97 aa4.78□□□□□ -1.64
PRKAB1-207ENST00000542698 KRTAP3-3Q9BYR6 98 aa4.78□□□□□ -1.64
PRKAB1-207ENST00000542698 KRTAP3-2Q9BYR7 98 aa4.78□□□□□ -1.64
PRKAB1-207ENST00000542698 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
PRKAB1-207ENST00000542698 FLG2Q5D862 2391 aaPredicted RBP4.76□□□□□ -1.65
PRKAB1-207ENST00000542698 KRTAP10-1P60331 282 aa4.76□□□□□ -1.65
PRKAB1-207ENST00000542698 A0A1B0GU33 70 aa4.76□□□□□ -1.65
PRKAB1-207ENST00000542698 ASB16-AS1Q495Z4 193 aa4.75□□□□□ -1.65
PRKAB1-207ENST00000542698 TENM2Q9NT68 2774 aa4.73□□□□□ -1.65
PRKAB1-207ENST00000542698 TGP01266 2768 aa4.73□□□□□ -1.65
PRKAB1-207ENST00000542698 ANK2Q01484 3957 aa4.72□□□□□ -1.65
PRKAB1-207ENST00000542698 LINC01554Q52M75 96 aa4.72□□□□□ -1.65
PRKAB1-207ENST00000542698 A6NN06 94 aa4.71□□□□□ -1.66
PRKAB1-207ENST00000542698 SPATA8Q6RVD6 105 aa4.69□□□□□ -1.66
PRKAB1-207ENST00000542698 A0A0D9SG42 100 aa4.68□□□□□ -1.66
PRKAB1-207ENST00000542698 KRTAP13-2Q52LG2 175 aa4.68□□□□□ -1.66
PRKAB1-207ENST00000542698 SPINT4Q6UDR6 99 aa4.68□□□□□ -1.66
PRKAB1-207ENST00000542698 CSAG1Q6PB30 78 aa4.67□□□□□ -1.66
PRKAB1-207ENST00000542698 CMYA5Q8N3K9 4069 aa4.67□□□□□ -1.66
PRKAB1-207ENST00000542698 CRIPTQ9P021 101 aa4.66□□□□□ -1.66
PRKAB1-207ENST00000542698 SRRM2Q9UQ35 2752 aaKnown RBP4.64□□□□□ -1.67
PRKAB1-207ENST00000542698 DNAH3Q8TD57 4116 aa4.63□□□□□ -1.67
PRKAB1-207ENST00000542698 H1FX-AS1Q4G0G2 97 aa4.59□□□□□ -1.68
PRKAB1-207ENST00000542698 ADM2Q7Z4H4 148 aa4.58□□□□□ -1.68
PRKAB1-207ENST00000542698 HUWE1Q7Z6Z7 4374 aaKnown RBP4.58□□□□□ -1.68
PRKAB1-207ENST00000542698 RPS29P62273 56 aaKnown RBP4.58□□□□□ -1.68
PRKAB1-207ENST00000542698 COX6B2Q6YFQ2 88 aa4.58□□□□□ -1.68
PRKAB1-207ENST00000542698 LCE2DQ5TA82 110 aaPredicted RBP4.57□□□□□ -1.68
PRKAB1-207ENST00000542698 DNAH1Q9P2D7 4330 aa4.57□□□□□ -1.68
PRKAB1-207ENST00000542698 DNHD1Q96M86 4753 aa4.56□□□□□ -1.68
PRKAB1-207ENST00000542698 RPL37P61927 97 aaKnown RBP4.55□□□□□ -1.68
PRKAB1-207ENST00000542698 Q6ZSA8 131 aa4.55□□□□□ -1.68
PRKAB1-207ENST00000542698 S4R3F8 94 aa4.54□□□□□ -1.68
PRKAB1-207ENST00000542698 KRTAP1-4P0C5Y4 121 aa4.54□□□□□ -1.68
PRKAB1-207ENST00000542698 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
PRKAB1-207ENST00000542698 KRTAP17-1Q9BYP8 105 aa4.53□□□□□ -1.68
PRKAB1-207ENST00000542698 LYSTQ99698 3801 aa4.51□□□□□ -1.69
PRKAB1-207ENST00000542698 KRTAP13-3Q3SY46 172 aa4.5□□□□□ -1.69
PRKAB1-207ENST00000542698 DNAH10Q8IVF4 4471 aa4.5□□□□□ -1.69
PRKAB1-207ENST00000542698 ROMO1P60602 79 aa4.5□□□□□ -1.69
PRKAB1-207ENST00000542698 KRTAP16-1A8MUX0 517 aa4.49□□□□□ -1.69
PRKAB1-207ENST00000542698 A8MUU9 505 aa4.48□□□□□ -1.69
PRKAB1-207ENST00000542698 COL7A1Q02388 2944 aa4.48□□□□□ -1.69
PRKAB1-207ENST00000542698 Q5VSD8 79 aa4.48□□□□□ -1.69
PRKAB1-207ENST00000542698 C20orf166-AS1Q96NR2 134 aa4.48□□□□□ -1.69
PRKAB1-207ENST00000542698 DNAH9Q9NYC9 4486 aa4.46□□□□□ -1.69
PRKAB1-207ENST00000542698 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
PRKAB1-207ENST00000542698 CSMD3Q7Z407 3707 aa4.45□□□□□ -1.7
PRKAB1-207ENST00000542698 MEGF8Q7Z7M0 2845 aa4.45□□□□□ -1.7
PRKAB1-207ENST00000542698 DNAH7Q8WXX0 4024 aa4.43□□□□□ -1.7
PRKAB1-207ENST00000542698 DYNC2H1Q8NCM8 4307 aaKnown RBP4.42□□□□□ -1.7
PRKAB1-207ENST00000542698 R4GN34 69 aa4.41□□□□□ -1.7
PRKAB1-207ENST00000542698 PLECQ15149 4684 aaKnown RBP4.41□□□□□ -1.7
PRKAB1-207ENST00000542698 BIRC6Q9NR09 4857 aa4.4□□□□□ -1.71
PRKAB1-207ENST00000542698 H0YAA0 97 aa4.39□□□□□ -1.71
PRKAB1-207ENST00000542698 CAMK2N1Q7Z7J9 78 aa4.37□□□□□ -1.71
PRKAB1-207ENST00000542698 M0QZ58 72 aa4.36□□□□□ -1.71
PRKAB1-207ENST00000542698 SEC61BP60468 96 aaKnown RBP4.34□□□□□ -1.71
PRKAB1-207ENST00000542698 STARD9Q9P2P6 4700 aa4.33□□□□□ -1.72
PRKAB1-207ENST00000542698 VPS13DQ5THJ4 4388 aa4.33□□□□□ -1.72
PRKAB1-207ENST00000542698 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
PRKAB1-207ENST00000542698 HECTD4Q9Y4D8 3996 aa4.31□□□□□ -1.72
PRKAB1-207ENST00000542698 PRKDCP78527 4128 aaKnown RBP4.3□□□□□ -1.72
PRKAB1-207ENST00000542698 KMT2AQ03164 3969 aa4.3□□□□□ -1.72
PRKAB1-207ENST00000542698 FRAS1Q86XX4 4008 aa4.28□□□□□ -1.72
PRKAB1-207ENST00000542698 XP32Q5T750 250 aa4.27□□□□□ -1.73
PRKAB1-207ENST00000542698 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
PRKAB1-207ENST00000542698 DNAH8Q96JB1 4490 aa4.25□□□□□ -1.73
PRKAB1-207ENST00000542698 DNAH17Q9UFH2 4485 aa4.25□□□□□ -1.73
PRKAB1-207ENST00000542698 KRTAP3-1Q9BYR8 98 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 248.9 ms