RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
FNDC3A-206ENST00000541916 ASB16-AS1Q495Z4 193 aa4.85□□□□□ -1.63
FNDC3A-206ENST00000541916 KRTAP7-1Q8IUC3 87 aa4.85□□□□□ -1.63
FNDC3A-206ENST00000541916 TENM2Q9NT68 2774 aa4.85□□□□□ -1.63
FNDC3A-206ENST00000541916 NIPBLQ6KC79 2804 aaeCLIP4.84□□□□□ -1.63
FNDC3A-206ENST00000541916 KRTAP13-1Q8IUC0 172 aa4.84□□□□□ -1.64
FNDC3A-206ENST00000541916 TPRXLQ17RH7 258 aa4.83□□□□□ -1.64
FNDC3A-206ENST00000541916 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
FNDC3A-206ENST00000541916 CFAP47Q6ZTR5 3102 aa4.82□□□□□ -1.64
FNDC3A-206ENST00000541916 ADGRG4Q8IZF6 3080 aa4.81□□□□□ -1.64
FNDC3A-206ENST00000541916 Q5XG85 94 aa4.81□□□□□ -1.64
FNDC3A-206ENST00000541916 CELSR2Q9HCU4 2923 aa4.8□□□□□ -1.64
FNDC3A-206ENST00000541916 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
FNDC3A-206ENST00000541916 XP32Q5T750 250 aa4.79□□□□□ -1.64
FNDC3A-206ENST00000541916 DMAC1Q96GE9 116 aa4.79□□□□□ -1.64
FNDC3A-206ENST00000541916 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
FNDC3A-206ENST00000541916 MYO15AQ9UKN7 3530 aa4.78□□□□□ -1.64
FNDC3A-206ENST00000541916 SPEGQ15772 3267 aa4.78□□□□□ -1.64
FNDC3A-206ENST00000541916 KRTAP1-4P0C5Y4 121 aa4.77□□□□□ -1.65
FNDC3A-206ENST00000541916 NF1P21359 2839 aa4.76□□□□□ -1.65
FNDC3A-206ENST00000541916 A8MUU9 505 aa4.74□□□□□ -1.65
FNDC3A-206ENST00000541916 KRTAP10-10P60014 251 aa4.74□□□□□ -1.65
FNDC3A-206ENST00000541916 DCHS2Q6V1P9 2916 aa4.74□□□□□ -1.65
FNDC3A-206ENST00000541916 MXRA5Q9NR99 2828 aa4.74□□□□□ -1.65
FNDC3A-206ENST00000541916 Q5VV11 94 aa4.73□□□□□ -1.65
FNDC3A-206ENST00000541916 PDZD2O15018 2839 aa4.73□□□□□ -1.65
FNDC3A-206ENST00000541916 ZANQ9Y493 2812 aa4.72□□□□□ -1.65
FNDC3A-206ENST00000541916 NBPF19A0A087WUL8 3843 aa4.71□□□□□ -1.65
FNDC3A-206ENST00000541916 TENM1Q9UKZ4 2725 aa4.7□□□□□ -1.66
FNDC3A-206ENST00000541916 FBN2P35556 2912 aa4.69□□□□□ -1.66
FNDC3A-206ENST00000541916 HRNRQ86YZ3 2850 aaPredicted RBP4.69□□□□□ -1.66
FNDC3A-206ENST00000541916 KRTAP10-8P60410 259 aa4.69□□□□□ -1.66
FNDC3A-206ENST00000541916 ASPMQ8IZT6 3477 aa4.68□□□□□ -1.66
FNDC3A-206ENST00000541916 TENM3Q9P273 2699 aa4.68□□□□□ -1.66
FNDC3A-206ENST00000541916 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
FNDC3A-206ENST00000541916 KRTAP13-3Q3SY46 172 aa4.66□□□□□ -1.66
FNDC3A-206ENST00000541916 OTOGQ6ZRI0 2925 aa4.65□□□□□ -1.66
FNDC3A-206ENST00000541916 PRAC1Q96KF2 57 aa4.65□□□□□ -1.66
FNDC3A-206ENST00000541916 WDFY3Q8IZQ1 3526 aa4.63□□□□□ -1.67
FNDC3A-206ENST00000541916 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
FNDC3A-206ENST00000541916 LOC400499M0QZD8 3231 aa4.61□□□□□ -1.67
FNDC3A-206ENST00000541916 ROMO1P60602 79 aa4.61□□□□□ -1.67
FNDC3A-206ENST00000541916 PKD1L1Q8TDX9 2849 aa4.59□□□□□ -1.68
FNDC3A-206ENST00000541916 DCHS1Q96JQ0 3298 aa4.58□□□□□ -1.68
FNDC3A-206ENST00000541916 ZFHX3Q15911 3703 aa4.57□□□□□ -1.68
FNDC3A-206ENST00000541916 RELNP78509 3460 aa4.56□□□□□ -1.68
FNDC3A-206ENST00000541916 PRO2289Q9P1D8 64 aa4.56□□□□□ -1.68
FNDC3A-206ENST00000541916 DMDP11532 3685 aa4.56□□□□□ -1.68
FNDC3A-206ENST00000541916 FBN3Q75N90 2809 aa4.53□□□□□ -1.68
FNDC3A-206ENST00000541916 A8MU10 97 aa4.53□□□□□ -1.68
FNDC3A-206ENST00000541916 ANK3Q12955 4377 aaKnown RBP4.53□□□□□ -1.68
FNDC3A-206ENST00000541916 FBN1P35555 2871 aaKnown RBP4.52□□□□□ -1.69
FNDC3A-206ENST00000541916 ZFHX4Q86UP3 3567 aa4.52□□□□□ -1.69
FNDC3A-206ENST00000541916 CELSR1Q9NYQ6 3014 aa4.52□□□□□ -1.69
FNDC3A-206ENST00000541916 KRTAP4-5Q9BYR2 181 aa4.5□□□□□ -1.69
FNDC3A-206ENST00000541916 LAMA5O15230 3695 aa4.48□□□□□ -1.69
FNDC3A-206ENST00000541916 TNP1P09430 55 aa4.47□□□□□ -1.69
FNDC3A-206ENST00000541916 VWFP04275 2813 aa4.45□□□□□ -1.7
FNDC3A-206ENST00000541916 TGP01266 2768 aa4.42□□□□□ -1.7
FNDC3A-206ENST00000541916 CSMD1Q96PZ7 3565 aa4.41□□□□□ -1.7
FNDC3A-206ENST00000541916 MUC3AQ02505 3323 aa4.4□□□□□ -1.7
FNDC3A-206ENST00000541916 SMG1Q96Q15 3661 aaKnown RBP4.39□□□□□ -1.71
FNDC3A-206ENST00000541916 BSNQ9UPA5 3926 aa4.38□□□□□ -1.71
FNDC3A-206ENST00000541916 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
FNDC3A-206ENST00000541916 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
FNDC3A-206ENST00000541916 A6NN06 94 aa4.35□□□□□ -1.71
FNDC3A-206ENST00000541916 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
FNDC3A-206ENST00000541916 ALMS1Q8TCU4 4167 aa4.33□□□□□ -1.72
FNDC3A-206ENST00000541916 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
FNDC3A-206ENST00000541916 SPENQ96T58 3664 aaKnown RBP4.3□□□□□ -1.72
FNDC3A-206ENST00000541916 CSMD2Q7Z408 3487 aa4.27□□□□□ -1.73
FNDC3A-206ENST00000541916 H3BS24 57 aa4.26□□□□□ -1.73
FNDC3A-206ENST00000541916 SVEP1Q4LDE5 3571 aa4.24□□□□□ -1.73
FNDC3A-206ENST00000541916 H0YAA0 97 aa4.22□□□□□ -1.73
FNDC3A-206ENST00000541916 HUWE1Q7Z6Z7 4374 aaKnown RBP4.21□□□□□ -1.74
FNDC3A-206ENST00000541916 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
FNDC3A-206ENST00000541916 KRTAP10-4P60372 401 aaPredicted RBP4.19□□□□□ -1.74
FNDC3A-206ENST00000541916 TRRAPQ9Y4A5 3859 aa4.18□□□□□ -1.74
FNDC3A-206ENST00000541916 P0C880 135 aa4.18□□□□□ -1.74
FNDC3A-206ENST00000541916 SRRM2Q9UQ35 2752 aaKnown RBP4.17□□□□□ -1.74
FNDC3A-206ENST00000541916 AKAP9Q99996 3911 aa4.16□□□□□ -1.74
FNDC3A-206ENST00000541916 PP632Q6XCG6 107 aa4.12□□□□□ -1.75
FNDC3A-206ENST00000541916 COL7A1Q02388 2944 aa4.11□□□□□ -1.75
FNDC3A-206ENST00000541916 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
FNDC3A-206ENST00000541916 VPS13CQ709C8 3753 aa4.1□□□□□ -1.75
FNDC3A-206ENST00000541916 DNHD1Q96M86 4753 aa4.08□□□□□ -1.76
FNDC3A-206ENST00000541916 DNAH9Q9NYC9 4486 aa4.06□□□□□ -1.76
FNDC3A-206ENST00000541916 KRTAP12-2P59991 146 aa4.04□□□□□ -1.76
FNDC3A-206ENST00000541916 MEGF8Q7Z7M0 2845 aa4.03□□□□□ -1.76
FNDC3A-206ENST00000541916 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
FNDC3A-206ENST00000541916 DNAH1Q9P2D7 4330 aa3.99□□□□□ -1.77
FNDC3A-206ENST00000541916 LORP23490 312 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-206ENST00000541916 DNAH11Q96DT5 4516 aa3.96□□□□□ -1.78
FNDC3A-206ENST00000541916 ZNF469Q96JG9 3925 aaPredicted RBP3.95□□□□□ -1.78
FNDC3A-206ENST00000541916 CUBNO60494 3623 aa3.95□□□□□ -1.78
FNDC3A-206ENST00000541916 DNAH5Q8TE73 4624 aa3.93□□□□□ -1.78
FNDC3A-206ENST00000541916 KRTAP12-1P59990 96 aa3.92□□□□□ -1.78
FNDC3A-206ENST00000541916 KRTAP17-1Q9BYP8 105 aa3.9□□□□□ -1.79
FNDC3A-206ENST00000541916 KRTAP13-4Q3LI77 160 aa3.9□□□□□ -1.79
FNDC3A-206ENST00000541916 MT1HP80294 61 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 620.8 ms