RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 KRTAP4-8Q9BYQ9 185 aa3.48□□□□□ -1.85
SNHG1-211ENST00000539921 HTN3P15516 51 aa3.47□□□□□ -1.85
SNHG1-211ENST00000539921 KRTAP10-2P60368 255 aa3.47□□□□□ -1.85
SNHG1-211ENST00000539921 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
SNHG1-211ENST00000539921 CSPG4Q6UVK1 2322 aa3.47□□□□□ -1.85
SNHG1-211ENST00000539921 PDZD2O15018 2839 aa3.46□□□□□ -1.86
SNHG1-211ENST00000539921 A0A096LNI7 61 aa3.45□□□□□ -1.86
SNHG1-211ENST00000539921 NBDYA0A0U1RRE5 68 aa3.45□□□□□ -1.86
SNHG1-211ENST00000539921 AKAP9Q99996 3911 aa3.45□□□□□ -1.86
SNHG1-211ENST00000539921 POLQO75417 2590 aa3.45□□□□□ -1.86
SNHG1-211ENST00000539921 TENM2Q9NT68 2774 aa3.45□□□□□ -1.86
SNHG1-211ENST00000539921 CELSR1Q9NYQ6 3014 aa3.44□□□□□ -1.86
SNHG1-211ENST00000539921 Q8N1X5 172 aa3.44□□□□□ -1.86
SNHG1-211ENST00000539921 CCDC168Q8NDH2 2452 aa3.44□□□□□ -1.86
SNHG1-211ENST00000539921 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
SNHG1-211ENST00000539921 JMJD1CQ15652 2540 aa3.43□□□□□ -1.86
SNHG1-211ENST00000539921 KRTAP9-6A0A140TA67 174 aa3.42□□□□□ -1.86
SNHG1-211ENST00000539921 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
SNHG1-211ENST00000539921 DEFB4AO15263 64 aa3.42□□□□□ -1.86
SNHG1-211ENST00000539921 KRTAP9-2Q9BYQ4 174 aa3.42□□□□□ -1.86
SNHG1-211ENST00000539921 ITPR3Q14573 2671 aa3.41□□□□□ -1.86
SNHG1-211ENST00000539921 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
SNHG1-211ENST00000539921 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
SNHG1-211ENST00000539921 FLNAP21333 2647 aaKnown RBP3.41□□□□□ -1.86
SNHG1-211ENST00000539921 HIVEP1P15822 2718 aa3.4□□□□□ -1.86
SNHG1-211ENST00000539921 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-211ENST00000539921 KRTAP10-9P60411 292 aa3.4□□□□□ -1.87
SNHG1-211ENST00000539921 NSD1Q96L73 2696 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-211ENST00000539921 F8P00451 2351 aa3.4□□□□□ -1.87
SNHG1-211ENST00000539921 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
SNHG1-211ENST00000539921 KRTAP24-1Q3LI83 254 aa3.39□□□□□ -1.87
SNHG1-211ENST00000539921 CRIPTQ9P021 101 aa3.39□□□□□ -1.87
SNHG1-211ENST00000539921 NF1P21359 2839 aa3.39□□□□□ -1.87
SNHG1-211ENST00000539921 FN1P02751 2386 aaKnown RBP3.38□□□□□ -1.87
SNHG1-211ENST00000539921 VPS13CQ709C8 3753 aa3.38□□□□□ -1.87
SNHG1-211ENST00000539921 ZNF469Q96JG9 3925 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-211ENST00000539921 MTORP42345 2549 aa3.38□□□□□ -1.87
SNHG1-211ENST00000539921 KRTAP1-3Q8IUG1 177 aa3.37□□□□□ -1.87
SNHG1-211ENST00000539921 TEP1Q99973 2627 aaKnown RBP3.37□□□□□ -1.87
SNHG1-211ENST00000539921 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
SNHG1-211ENST00000539921 KRTAP21-3Q3LHN1 58 aa3.34□□□□□ -1.87
SNHG1-211ENST00000539921 TYMSOSQ8TAI1 123 aa3.34□□□□□ -1.87
SNHG1-211ENST00000539921 CIRBP-AS1Q8TBR5 109 aa3.34□□□□□ -1.87
SNHG1-211ENST00000539921 ZANQ9Y493 2812 aa3.34□□□□□ -1.87
SNHG1-211ENST00000539921 SETD2Q9BYW2 2564 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-211ENST00000539921 ACANP16112 2415 aa3.33□□□□□ -1.88
SNHG1-211ENST00000539921 HIVEP2P31629 2446 aa3.33□□□□□ -1.88
SNHG1-211ENST00000539921 NIPBLQ6KC79 2804 aaeCLIP3.32□□□□□ -1.889e-27■■■■□ 22.5
SNHG1-211ENST00000539921 KRTAP1-1Q07627 177 aa3.31□□□□□ -1.88
SNHG1-211ENST00000539921 SPINK6Q6UWN8 80 aa3.31□□□□□ -1.88
SNHG1-211ENST00000539921 SPINK1P00995 79 aa3.3□□□□□ -1.88
SNHG1-211ENST00000539921 SPACA4Q8TDM5 124 aa3.3□□□□□ -1.88
SNHG1-211ENST00000539921 MXRA5Q9NR99 2828 aa3.29□□□□□ -1.88
SNHG1-211ENST00000539921 MAPK1IP1LQ8NDC0 245 aa3.29□□□□□ -1.88
SNHG1-211ENST00000539921 SMR3AQ99954 134 aa3.28□□□□□ -1.88
SNHG1-211ENST00000539921 SONP18583 2426 aaKnown RBP3.28□□□□□ -1.89
SNHG1-211ENST00000539921 ATRQ13535 2644 aa3.27□□□□□ -1.89
SNHG1-211ENST00000539921 KRTAP9-4Q9BYQ2 154 aa3.27□□□□□ -1.89
SNHG1-211ENST00000539921 ANK2Q01484 3957 aa3.27□□□□□ -1.89
SNHG1-211ENST00000539921 NBEAL2Q6ZNJ1 2754 aa3.27□□□□□ -1.89
SNHG1-211ENST00000539921 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
SNHG1-211ENST00000539921 SVEP1Q4LDE5 3571 aa3.26□□□□□ -1.89
SNHG1-211ENST00000539921 CUBNO60494 3623 aa3.25□□□□□ -1.89
SNHG1-211ENST00000539921 STAB1Q9NY15 2570 aa3.25□□□□□ -1.89
SNHG1-211ENST00000539921 KRTAP10-3P60369 221 aa3.25□□□□□ -1.89
SNHG1-211ENST00000539921 KRTAP9-3Q9BYQ3 159 aa3.25□□□□□ -1.89
SNHG1-211ENST00000539921 RPS29P62273 56 aaKnown RBP3.24□□□□□ -1.89
SNHG1-211ENST00000539921 PLAC4Q8WY50 150 aa3.24□□□□□ -1.89
SNHG1-211ENST00000539921 COL6A5A8TX70 2615 aa3.23□□□□□ -1.89
SNHG1-211ENST00000539921 FLG2Q5D862 2391 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-211ENST00000539921 DNAH1Q9P2D7 4330 aa3.22□□□□□ -1.89
SNHG1-211ENST00000539921 FBN3Q75N90 2809 aa3.22□□□□□ -1.89
SNHG1-211ENST00000539921 DNHD1Q96M86 4753 aa3.22□□□□□ -1.89
SNHG1-211ENST00000539921 FBN1P35555 2871 aaKnown RBP3.22□□□□□ -1.89
SNHG1-211ENST00000539921 S4R3F8 94 aa3.21□□□□□ -1.9
SNHG1-211ENST00000539921 C10orf95Q9H7T3 257 aa3.2□□□□□ -1.9
SNHG1-211ENST00000539921 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
SNHG1-211ENST00000539921 ANK3Q12955 4377 aaKnown RBP3.2□□□□□ -1.9
SNHG1-211ENST00000539921 KRTAP10-6P60371 365 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-211ENST00000539921 TENM1Q9UKZ4 2725 aa3.19□□□□□ -1.9
SNHG1-211ENST00000539921 KRTAP1-5Q9BYS1 174 aa3.18□□□□□ -1.9
SNHG1-211ENST00000539921 Q6ZRN7 208 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-211ENST00000539921 SRRM2Q9UQ35 2752 aaKnown RBP3.15□□□□□ -1.9
SNHG1-211ENST00000539921 PP632Q6XCG6 107 aa3.15□□□□□ -1.91
SNHG1-211ENST00000539921 NBEAL1Q6ZS30 2694 aa3.14□□□□□ -1.91
SNHG1-211ENST00000539921 MGAM2Q2M2H8 2515 aa3.13□□□□□ -1.91
SNHG1-211ENST00000539921 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
SNHG1-211ENST00000539921 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
SNHG1-211ENST00000539921 MEGF8Q7Z7M0 2845 aa3.13□□□□□ -1.91
SNHG1-211ENST00000539921 KRTAP4-8A0A0G2JLE6 195 aa3.12□□□□□ -1.91
SNHG1-211ENST00000539921 M0QZ58 72 aa3.12□□□□□ -1.91
SNHG1-211ENST00000539921 KRTAP12-1P59990 96 aa3.12□□□□□ -1.91
SNHG1-211ENST00000539921 LCE5AQ5TCM9 118 aa3.12□□□□□ -1.91
SNHG1-211ENST00000539921 INE1O15225 51 aa3.11□□□□□ -1.91
SNHG1-211ENST00000539921 APLNQ9ULZ1 77 aa3.11□□□□□ -1.91
SNHG1-211ENST00000539921 PKD1L1Q8TDX9 2849 aa3.11□□□□□ -1.91
SNHG1-211ENST00000539921 VWFP04275 2813 aa3.1□□□□□ -1.91
SNHG1-211ENST00000539921 KRTAP13-2Q52LG2 175 aa3.1□□□□□ -1.91
SNHG1-211ENST00000539921 UBE2DNLQ8IWF7 75 aa3.1□□□□□ -1.91
SNHG1-211ENST00000539921 TRRAPQ9Y4A5 3859 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms