RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 KRTAP13-1Q8IUC0 172 aa8.96□□□□□ -0.97
PCDHA3-202ENST00000532566 DMDP11532 3685 aa8.96□□□□□ -0.98
PCDHA3-202ENST00000532566 ZFHX4Q86UP3 3567 aa8.95□□□□□ -0.98
PCDHA3-202ENST00000532566 LCA10Q71F78 164 aa8.94□□□□□ -0.98
PCDHA3-202ENST00000532566 SPINK7P58062 85 aa8.93□□□□□ -0.98
PCDHA3-202ENST00000532566 A0A1B0GU33 70 aa8.93□□□□□ -0.98
PCDHA3-202ENST00000532566 Q6ZSA8 131 aa8.93□□□□□ -0.98
PCDHA3-202ENST00000532566 NOTCH2NLQ7Z3S9 236 aa8.93□□□□□ -0.98
PCDHA3-202ENST00000532566 CELSR1Q9NYQ6 3014 aa8.92□□□□□ -0.98
PCDHA3-202ENST00000532566 A0A0D9SG42 100 aa8.92□□□□□ -0.98
PCDHA3-202ENST00000532566 DMAC1Q96GE9 116 aa8.92□□□□□ -0.98
PCDHA3-202ENST00000532566 TENM3Q9P273 2699 aa8.9□□□□□ -0.98
PCDHA3-202ENST00000532566 ASB16-AS1Q495Z4 193 aa8.89□□□□□ -0.99
PCDHA3-202ENST00000532566 CRIPTQ9P021 101 aa8.88□□□□□ -0.99
PCDHA3-202ENST00000532566 SPINT4Q6UDR6 99 aa8.86□□□□□ -0.99
PCDHA3-202ENST00000532566 Q5VSD8 79 aa8.85□□□□□ -0.99
PCDHA3-202ENST00000532566 LINC01554Q52M75 96 aa8.82□□□□□ -1
PCDHA3-202ENST00000532566 TENM1Q9UKZ4 2725 aa8.81□□□□□ -1
PCDHA3-202ENST00000532566 PDZD2O15018 2839 aa8.79□□□□□ -1
PCDHA3-202ENST00000532566 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
PCDHA3-202ENST00000532566 S4R3F8 94 aa8.75□□□□□ -1.01
PCDHA3-202ENST00000532566 CSAG1Q6PB30 78 aa8.74□□□□□ -1.01
PCDHA3-202ENST00000532566 RPS29P62273 56 aaKnown RBP8.73□□□□□ -1.01
PCDHA3-202ENST00000532566 SMG1Q96Q15 3661 aaKnown RBP8.72□□□□□ -1.01
PCDHA3-202ENST00000532566 CSMD1Q96PZ7 3565 aa8.69□□□□□ -1.02
PCDHA3-202ENST00000532566 VWFP04275 2813 aa8.69□□□□□ -1.02
PCDHA3-202ENST00000532566 PRAC1Q96KF2 57 aa8.65□□□□□ -1.02
PCDHA3-202ENST00000532566 KRTAP21-3Q3LHN1 58 aa8.64□□□□□ -1.03
PCDHA3-202ENST00000532566 OTOGQ6ZRI0 2925 aa8.63□□□□□ -1.03
PCDHA3-202ENST00000532566 SEC61BP60468 96 aaKnown RBP8.62□□□□□ -1.03
PCDHA3-202ENST00000532566 PKD1L1Q8TDX9 2849 aa8.62□□□□□ -1.03
PCDHA3-202ENST00000532566 FBN1P35555 2871 aaKnown RBP8.61□□□□□ -1.03
PCDHA3-202ENST00000532566 H1FX-AS1Q4G0G2 97 aa8.58□□□□□ -1.04
PCDHA3-202ENST00000532566 RPL37P61927 97 aaKnown RBP8.54□□□□□ -1.04
PCDHA3-202ENST00000532566 CAMK2N1Q7Z7J9 78 aa8.54□□□□□ -1.04
PCDHA3-202ENST00000532566 SPATA8Q6RVD6 105 aa8.53□□□□□ -1.04
PCDHA3-202ENST00000532566 R4GN34 69 aa8.52□□□□□ -1.05
PCDHA3-202ENST00000532566 TGP01266 2768 aa8.51□□□□□ -1.05
PCDHA3-202ENST00000532566 TENM2Q9NT68 2774 aa8.51□□□□□ -1.05
PCDHA3-202ENST00000532566 SVEP1Q4LDE5 3571 aa8.49□□□□□ -1.05
PCDHA3-202ENST00000532566 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
PCDHA3-202ENST00000532566 NBPF19A0A087WUL8 3843 aa8.47□□□□□ -1.05
PCDHA3-202ENST00000532566 M0R2T5 61 aa8.44□□□□□ -1.06
PCDHA3-202ENST00000532566 A8MUU9 505 aa8.43□□□□□ -1.06
PCDHA3-202ENST00000532566 A8MU10 97 aa8.41□□□□□ -1.06
PCDHA3-202ENST00000532566 ROMO1P60602 79 aa8.41□□□□□ -1.06
PCDHA3-202ENST00000532566 C20orf166-AS1Q96NR2 134 aa8.4□□□□□ -1.06
PCDHA3-202ENST00000532566 SPENQ96T58 3664 aaKnown RBP8.4□□□□□ -1.07
PCDHA3-202ENST00000532566 A6NN06 94 aa8.39□□□□□ -1.07
PCDHA3-202ENST00000532566 ADM2Q7Z4H4 148 aa8.39□□□□□ -1.07
PCDHA3-202ENST00000532566 M0QZ58 72 aa8.39□□□□□ -1.07
PCDHA3-202ENST00000532566 SRRM2Q9UQ35 2752 aaKnown RBP8.36□□□□□ -1.07
PCDHA3-202ENST00000532566 ZFHX3Q15911 3703 aa8.33□□□□□ -1.08
PCDHA3-202ENST00000532566 CSMD2Q7Z408 3487 aa8.32□□□□□ -1.08
PCDHA3-202ENST00000532566 CUBNO60494 3623 aa8.32□□□□□ -1.08
PCDHA3-202ENST00000532566 BSNQ9UPA5 3926 aa8.3□□□□□ -1.08
PCDHA3-202ENST00000532566 LUZP6Q538Z0 58 aa8.28□□□□□ -1.08
PCDHA3-202ENST00000532566 KRTAP16-1A8MUX0 517 aa8.26□□□□□ -1.09
PCDHA3-202ENST00000532566 ANK3Q12955 4377 aaKnown RBP8.23□□□□□ -1.09
PCDHA3-202ENST00000532566 XP32Q5T750 250 aa8.15□□□□□ -1.1
PCDHA3-202ENST00000532566 KRTAP25-1Q3LHN0 102 aa8.12□□□□□ -1.11
PCDHA3-202ENST00000532566 TRRAPQ9Y4A5 3859 aa8.12□□□□□ -1.11
PCDHA3-202ENST00000532566 KRTAP13-3Q3SY46 172 aa8.12□□□□□ -1.11
PCDHA3-202ENST00000532566 FBN3Q75N90 2809 aa8.1□□□□□ -1.11
PCDHA3-202ENST00000532566 A0A1B0GVY2 172 aa8.02□□□□□ -1.13
PCDHA3-202ENST00000532566 PLAC4Q8WY50 150 aa8.01□□□□□ -1.13
PCDHA3-202ENST00000532566 H3BS24 57 aa7.99□□□□□ -1.13
PCDHA3-202ENST00000532566 TPRXLQ17RH7 258 aa7.99□□□□□ -1.13
PCDHA3-202ENST00000532566 MEGF8Q7Z7M0 2845 aa7.98□□□□□ -1.13
PCDHA3-202ENST00000532566 H0YAA0 97 aa7.97□□□□□ -1.13
PCDHA3-202ENST00000532566 KRTAP10-8P60410 259 aa7.95□□□□□ -1.14
PCDHA3-202ENST00000532566 COL7A1Q02388 2944 aa7.83□□□□□ -1.16
PCDHA3-202ENST00000532566 VPS13CQ709C8 3753 aa7.83□□□□□ -1.16
PCDHA3-202ENST00000532566 A0A0A0MQY5 61 aa7.8□□□□□ -1.16
PCDHA3-202ENST00000532566 P0C880 135 aa7.79□□□□□ -1.16
PCDHA3-202ENST00000532566 TNP1P09430 55 aa7.74□□□□□ -1.17
PCDHA3-202ENST00000532566 C10orf95Q9H7T3 257 aa7.71□□□□□ -1.18
PCDHA3-202ENST00000532566 ZNF469Q96JG9 3925 aaPredicted RBP7.69□□□□□ -1.18
PCDHA3-202ENST00000532566 KRTAP3-1Q9BYR8 98 aa7.66□□□□□ -1.18
PCDHA3-202ENST00000532566 HUWE1Q7Z6Z7 4374 aaKnown RBP7.65□□□□□ -1.19
PCDHA3-202ENST00000532566 NDUFAF8A1L188 74 aa7.63□□□□□ -1.19
PCDHA3-202ENST00000532566 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
PCDHA3-202ENST00000532566 KRTAP12-2P59991 146 aa7.45□□□□□ -1.22
PCDHA3-202ENST00000532566 AKAP9Q99996 3911 aa7.45□□□□□ -1.22
PCDHA3-202ENST00000532566 KRTAP10-10P60014 251 aa7.45□□□□□ -1.22
PCDHA3-202ENST00000532566 KRTAP10-4P60372 401 aaPredicted RBP7.44□□□□□ -1.22
PCDHA3-202ENST00000532566 MT1HL1P0DM35 61 aa7.41□□□□□ -1.22
PCDHA3-202ENST00000532566 KRTAP12-1P59990 96 aa7.4□□□□□ -1.22
PCDHA3-202ENST00000532566 KRTAP10-6P60371 365 aaPredicted RBP7.39□□□□□ -1.23
PCDHA3-202ENST00000532566 DNAH9Q9NYC9 4486 aa7.37□□□□□ -1.23
PCDHA3-202ENST00000532566 CSMD3Q7Z407 3707 aa7.34□□□□□ -1.23
PCDHA3-202ENST00000532566 KRTAP13-4Q3LI77 160 aa7.34□□□□□ -1.23
PCDHA3-202ENST00000532566 KRTAP3-3Q9BYR6 98 aa7.23□□□□□ -1.25
PCDHA3-202ENST00000532566 PLECQ15149 4684 aaKnown RBP7.22□□□□□ -1.25
PCDHA3-202ENST00000532566 PRO2289Q9P1D8 64 aa7.21□□□□□ -1.26
PCDHA3-202ENST00000532566 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
PCDHA3-202ENST00000532566 DNAH1Q9P2D7 4330 aa7.16□□□□□ -1.26
PCDHA3-202ENST00000532566 DNAH5Q8TE73 4624 aa7.14□□□□□ -1.27
PCDHA3-202ENST00000532566 ALMS1Q8TCU4 4167 aa7.12□□□□□ -1.27
PCDHA3-202ENST00000532566 DNAH11Q96DT5 4516 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms