RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
CTNND1-231ENST00000532463 KRTAP13-2Q52LG2 175 aa4.36□□□□□ -1.71
CTNND1-231ENST00000532463 KALRNO60229 2985 aa4.36□□□□□ -1.71
CTNND1-231ENST00000532463 KRTAP7-1Q8IUC3 87 aa4.35□□□□□ -1.71
CTNND1-231ENST00000532463 TNRC18O15417 2968 aaPredicted RBP4.35□□□□□ -1.71
CTNND1-231ENST00000532463 ASH1LQ9NR48 2969 aaKnown RBP4.32□□□□□ -1.72
CTNND1-231ENST00000532463 NBEAQ8NFP9 2946 aa4.31□□□□□ -1.72
CTNND1-231ENST00000532463 REV3LO60673 3130 aa4.31□□□□□ -1.72
CTNND1-231ENST00000532463 NSD1Q96L73 2696 aaPredicted RBP4.3□□□□□ -1.72
CTNND1-231ENST00000532463 DMXL2Q8TDJ6 3036 aa4.3□□□□□ -1.72
CTNND1-231ENST00000532463 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
CTNND1-231ENST00000532463 DMDP11532 3685 aa4.3□□□□□ -1.72
CTNND1-231ENST00000532463 ITPR1Q14643 2758 aa4.29□□□□□ -1.72
CTNND1-231ENST00000532463 LAMA1P25391 3075 aa4.29□□□□□ -1.72
CTNND1-231ENST00000532463 UBR5O95071 2799 aaPredicted RBP4.28□□□□□ -1.72
CTNND1-231ENST00000532463 FRYLO94915 3013 aa4.28□□□□□ -1.72
CTNND1-231ENST00000532463 WDFY3Q8IZQ1 3526 aa4.28□□□□□ -1.72
CTNND1-231ENST00000532463 A0A1B0GVY2 172 aa4.25□□□□□ -1.73
CTNND1-231ENST00000532463 KRTAP10-10P60014 251 aa4.23□□□□□ -1.73
CTNND1-231ENST00000532463 ATMQ13315 3056 aa4.22□□□□□ -1.73
CTNND1-231ENST00000532463 COL12A1Q99715 3063 aa4.22□□□□□ -1.73
CTNND1-231ENST00000532463 FLNCQ14315 2725 aa4.22□□□□□ -1.73
CTNND1-231ENST00000532463 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
CTNND1-231ENST00000532463 TACC2O95359 2948 aa4.22□□□□□ -1.73
CTNND1-231ENST00000532463 APCP25054 2843 aa4.22□□□□□ -1.73
CTNND1-231ENST00000532463 INE1O15225 51 aa4.22□□□□□ -1.73
CTNND1-231ENST00000532463 ASPMQ8IZT6 3477 aa4.21□□□□□ -1.74
CTNND1-231ENST00000532463 LRBAP50851 2863 aa4.2□□□□□ -1.74
CTNND1-231ENST00000532463 XP32Q5T750 250 aa4.19□□□□□ -1.74
CTNND1-231ENST00000532463 CFAP47Q6ZTR5 3102 aa4.19□□□□□ -1.74
CTNND1-231ENST00000532463 ITPR2Q14571 2701 aa4.19□□□□□ -1.74
CTNND1-231ENST00000532463 BOD1L1Q8NFC6 3051 aa4.18□□□□□ -1.74
CTNND1-231ENST00000532463 HIVEP1P15822 2718 aa4.18□□□□□ -1.74
CTNND1-231ENST00000532463 ADGRG4Q8IZF6 3080 aa4.16□□□□□ -1.74
CTNND1-231ENST00000532463 DMXL1Q9Y485 3027 aa4.15□□□□□ -1.74
CTNND1-231ENST00000532463 UTP20O75691 2785 aaKnown RBP4.15□□□□□ -1.75
CTNND1-231ENST00000532463 CRYBG3Q68DQ2 2970 aa4.15□□□□□ -1.75
CTNND1-231ENST00000532463 KRTAP13-4Q3LI77 160 aa4.15□□□□□ -1.75
CTNND1-231ENST00000532463 KMT2BQ9UMN6 2715 aaPredicted RBP4.14□□□□□ -1.75
CTNND1-231ENST00000532463 MUC3AQ02505 3323 aa4.14□□□□□ -1.75
CTNND1-231ENST00000532463 ZFHX4Q86UP3 3567 aa4.13□□□□□ -1.75
CTNND1-231ENST00000532463 TENM4Q6N022 2769 aa4.11□□□□□ -1.75
CTNND1-231ENST00000532463 LAMA5O15230 3695 aa4.1□□□□□ -1.75
CTNND1-231ENST00000532463 KRTAP15-1Q3LI76 137 aa4.1□□□□□ -1.75
CTNND1-231ENST00000532463 TPRXLQ17RH7 258 aa4.09□□□□□ -1.75
CTNND1-231ENST00000532463 ZZEF1O43149 2961 aa4.09□□□□□ -1.76
CTNND1-231ENST00000532463 CELSR2Q9HCU4 2923 aa4.09□□□□□ -1.76
CTNND1-231ENST00000532463 KRTAP1-4P0C5Y4 121 aa4.02□□□□□ -1.77
CTNND1-231ENST00000532463 DCHS1Q96JQ0 3298 aa4.02□□□□□ -1.77
CTNND1-231ENST00000532463 LOC400499M0QZD8 3231 aa4□□□□□ -1.77
CTNND1-231ENST00000532463 DCHS2Q6V1P9 2916 aa4□□□□□ -1.77
CTNND1-231ENST00000532463 KRTAP12-1P59990 96 aa4□□□□□ -1.77
CTNND1-231ENST00000532463 NIPBLQ6KC79 2804 aaeCLIP3.97□□□□□ -1.771e-6■□□□□ 9
CTNND1-231ENST00000532463 KRTAP13-3Q3SY46 172 aa3.96□□□□□ -1.78
CTNND1-231ENST00000532463 SMG1Q96Q15 3661 aaKnown RBP3.96□□□□□ -1.78
CTNND1-231ENST00000532463 RELNP78509 3460 aa3.95□□□□□ -1.78
CTNND1-231ENST00000532463 ZANQ9Y493 2812 aa3.93□□□□□ -1.78
CTNND1-231ENST00000532463 SPENQ96T58 3664 aaKnown RBP3.93□□□□□ -1.78
CTNND1-231ENST00000532463 TGP01266 2768 aa3.93□□□□□ -1.78
CTNND1-231ENST00000532463 FBN2P35556 2912 aa3.91□□□□□ -1.78
CTNND1-231ENST00000532463 CSMD1Q96PZ7 3565 aa3.9□□□□□ -1.79
CTNND1-231ENST00000532463 NF1P21359 2839 aa3.89□□□□□ -1.79
CTNND1-231ENST00000532463 SVEP1Q4LDE5 3571 aa3.88□□□□□ -1.79
CTNND1-231ENST00000532463 LCE2DQ5TA82 110 aaPredicted RBP3.88□□□□□ -1.79
CTNND1-231ENST00000532463 TENM3Q9P273 2699 aa3.87□□□□□ -1.79
CTNND1-231ENST00000532463 HRNRQ86YZ3 2850 aaPredicted RBP3.83□□□□□ -1.8
CTNND1-231ENST00000532463 CELSR1Q9NYQ6 3014 aa3.83□□□□□ -1.8
CTNND1-231ENST00000532463 TENM1Q9UKZ4 2725 aa3.82□□□□□ -1.8
CTNND1-231ENST00000532463 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
CTNND1-231ENST00000532463 CRCT1Q9UGL9 99 aa3.8□□□□□ -1.8
CTNND1-231ENST00000532463 MXRA5Q9NR99 2828 aa3.8□□□□□ -1.8
CTNND1-231ENST00000532463 NBPF19A0A087WUL8 3843 aa3.8□□□□□ -1.8
CTNND1-231ENST00000532463 TENM2Q9NT68 2774 aa3.8□□□□□ -1.8
CTNND1-231ENST00000532463 PDZD2O15018 2839 aa3.79□□□□□ -1.8
CTNND1-231ENST00000532463 BSNQ9UPA5 3926 aa3.78□□□□□ -1.8
CTNND1-231ENST00000532463 ZFHX3Q15911 3703 aa3.78□□□□□ -1.8
CTNND1-231ENST00000532463 PKD1L1Q8TDX9 2849 aa3.76□□□□□ -1.81
CTNND1-231ENST00000532463 VPS13CQ709C8 3753 aa3.74□□□□□ -1.81
CTNND1-231ENST00000532463 CSMD2Q7Z408 3487 aa3.74□□□□□ -1.81
CTNND1-231ENST00000532463 KRTAP3-1Q9BYR8 98 aa3.73□□□□□ -1.81
CTNND1-231ENST00000532463 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
CTNND1-231ENST00000532463 VWFP04275 2813 aa3.71□□□□□ -1.82
CTNND1-231ENST00000532463 CUBNO60494 3623 aa3.71□□□□□ -1.82
CTNND1-231ENST00000532463 OTOGQ6ZRI0 2925 aa3.7□□□□□ -1.82
CTNND1-231ENST00000532463 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
CTNND1-231ENST00000532463 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
CTNND1-231ENST00000532463 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
CTNND1-231ENST00000532463 FBN1P35555 2871 aaKnown RBP3.63□□□□□ -1.83
CTNND1-231ENST00000532463 SRRM2Q9UQ35 2752 aaKnown RBP3.57□□□□□ -1.84
CTNND1-231ENST00000532463 FBN3Q75N90 2809 aa3.53□□□□□ -1.84
CTNND1-231ENST00000532463 MEGF8Q7Z7M0 2845 aa3.52□□□□□ -1.85
CTNND1-231ENST00000532463 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
CTNND1-231ENST00000532463 KRTAP3-2Q9BYR7 98 aa3.49□□□□□ -1.85
CTNND1-231ENST00000532463 ANK3Q12955 4377 aaKnown RBP3.49□□□□□ -1.85
CTNND1-231ENST00000532463 ZNF469Q96JG9 3925 aaPredicted RBP3.47□□□□□ -1.85
CTNND1-231ENST00000532463 KRTAP3-3Q9BYR6 98 aa3.46□□□□□ -1.86
CTNND1-231ENST00000532463 COL7A1Q02388 2944 aa3.45□□□□□ -1.86
CTNND1-231ENST00000532463 TRRAPQ9Y4A5 3859 aa3.43□□□□□ -1.86
CTNND1-231ENST00000532463 AKAP9Q99996 3911 aa3.43□□□□□ -1.86
CTNND1-231ENST00000532463 KRTAP4-5Q9BYR2 181 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms