RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 PLECQ15149 4684 aaKnown RBP4.78□□□□□ -1.64
CSDE1-214ENST00000530886 ITPR2Q14571 2701 aa4.77□□□□□ -1.65
CSDE1-214ENST00000530886 DNAH2Q9P225 4427 aa4.77□□□□□ -1.65
CSDE1-214ENST00000530886 IGLV5-52A0A0A0MRZ9 124 aa4.76□□□□□ -1.65
CSDE1-214ENST00000530886 HECTD1Q9ULT8 2610 aa4.76□□□□□ -1.65
CSDE1-214ENST00000530886 TEP1Q99973 2627 aaKnown RBP4.76□□□□□ -1.65
CSDE1-214ENST00000530886 MTORP42345 2549 aa4.75□□□□□ -1.65
CSDE1-214ENST00000530886 USP24Q9UPU5 2620 aa4.74□□□□□ -1.65
CSDE1-214ENST00000530886 FBN3Q75N90 2809 aa4.74□□□□□ -1.65
CSDE1-214ENST00000530886 ZNF462Q96JM2 2506 aa4.74□□□□□ -1.65
CSDE1-214ENST00000530886 IGKV2-30P06310 120 aa4.74□□□□□ -1.65
CSDE1-214ENST00000530886 P0C880 135 aa4.73□□□□□ -1.65
CSDE1-214ENST00000530886 MEGF8Q7Z7M0 2845 aa4.73□□□□□ -1.65
CSDE1-214ENST00000530886 ACACBO00763 2458 aa4.72□□□□□ -1.65
CSDE1-214ENST00000530886 F8P00451 2351 aa4.72□□□□□ -1.65
CSDE1-214ENST00000530886 FAM229AH3BQW9 127 aa4.72□□□□□ -1.65
CSDE1-214ENST00000530886 ACANP16112 2415 aa4.72□□□□□ -1.65
CSDE1-214ENST00000530886 KRTAP21-3Q3LHN1 58 aa4.71□□□□□ -1.65
CSDE1-214ENST00000530886 LINC00304Q8N9R0 145 aa4.71□□□□□ -1.65
CSDE1-214ENST00000530886 LY6G6CO95867 125 aa4.71□□□□□ -1.66
CSDE1-214ENST00000530886 OXLD1Q5BKU9 147 aa4.7□□□□□ -1.66
CSDE1-214ENST00000530886 INAFM1C9JVW0 142 aa4.7□□□□□ -1.66
CSDE1-214ENST00000530886 HELZ2Q9BYK8 2649 aaKnown RBP4.7□□□□□ -1.66
CSDE1-214ENST00000530886 NSD1Q96L73 2696 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-214ENST00000530886 FAM208BQ5VWN6 2430 aa4.69□□□□□ -1.66
CSDE1-214ENST00000530886 WWC2-AS2Q96NR7 200 aa4.69□□□□□ -1.66
CSDE1-214ENST00000530886 IGLV9-49A0A0B4J1Y8 123 aa4.69□□□□□ -1.66
CSDE1-214ENST00000530886 KRTAP10-11P60412 298 aa4.67□□□□□ -1.66
CSDE1-214ENST00000530886 DNAH11Q96DT5 4516 aa4.67□□□□□ -1.66
CSDE1-214ENST00000530886 IGKV2D-30A0A075B6S6 120 aa4.66□□□□□ -1.66
CSDE1-214ENST00000530886 H0YAA0 97 aa4.66□□□□□ -1.66
CSDE1-214ENST00000530886 KRTAP1-5Q9BYS1 174 aa4.66□□□□□ -1.66
CSDE1-214ENST00000530886 NBEAL1Q6ZS30 2694 aa4.65□□□□□ -1.67
CSDE1-214ENST00000530886 C14orf177Q52M58 125 aa4.65□□□□□ -1.67
CSDE1-214ENST00000530886 STARD9Q9P2P6 4700 aa4.64□□□□□ -1.67
CSDE1-214ENST00000530886 Q6ZSA8 131 aa4.64□□□□□ -1.67
CSDE1-214ENST00000530886 PANO1I0J062 215 aa4.64□□□□□ -1.67
CSDE1-214ENST00000530886 DNAH5Q8TE73 4624 aa4.63□□□□□ -1.67
CSDE1-214ENST00000530886 NOTCH2Q04721 2471 aa4.63□□□□□ -1.67
CSDE1-214ENST00000530886 SMR3AQ99954 134 aa4.63□□□□□ -1.67
CSDE1-214ENST00000530886 FLNBO75369 2602 aaKnown RBP4.63□□□□□ -1.67
CSDE1-214ENST00000530886 MAST4O15021 2626 aa4.62□□□□□ -1.67
CSDE1-214ENST00000530886 ANAPC11Q9NYG5 84 aa4.62□□□□□ -1.67
CSDE1-214ENST00000530886 ATRQ13535 2644 aa4.61□□□□□ -1.67
CSDE1-214ENST00000530886 KRTAP16-1A8MUX0 517 aa4.6□□□□□ -1.67
CSDE1-214ENST00000530886 NUPR2A6NF83 97 aa4.58□□□□□ -1.68
CSDE1-214ENST00000530886 PKD1P98161 4303 aa4.58□□□□□ -1.68
CSDE1-214ENST00000530886 A0A087WTM6 91 aa4.56□□□□□ -1.68
CSDE1-214ENST00000530886 SPINK6Q6UWN8 80 aa4.56□□□□□ -1.68
CSDE1-214ENST00000530886 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
CSDE1-214ENST00000530886 A0A1B0GU33 70 aa4.55□□□□□ -1.68
CSDE1-214ENST00000530886 H1FX-AS1Q4G0G2 97 aa4.55□□□□□ -1.68
CSDE1-214ENST00000530886 FAT2Q9NYQ8 4349 aa4.55□□□□□ -1.68
CSDE1-214ENST00000530886 SPACA4Q8TDM5 124 aa4.55□□□□□ -1.68
CSDE1-214ENST00000530886 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
CSDE1-214ENST00000530886 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
CSDE1-214ENST00000530886 PSORS1C2Q9UIG4 136 aa4.55□□□□□ -1.68
CSDE1-214ENST00000530886 K7ERS5 55 aa4.53□□□□□ -1.68
CSDE1-214ENST00000530886 SSBP3-AS1Q7Z2R9 100 aa4.52□□□□□ -1.69
CSDE1-214ENST00000530886 VPS13BQ7Z7G8 4022 aa4.52□□□□□ -1.69
CSDE1-214ENST00000530886 Q6ZRN7 208 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-214ENST00000530886 LRP1BQ9NZR2 4599 aa4.51□□□□□ -1.69
CSDE1-214ENST00000530886 TYMSOSQ8TAI1 123 aa4.5□□□□□ -1.69
CSDE1-214ENST00000530886 NOTCH1P46531 2555 aa4.49□□□□□ -1.69
CSDE1-214ENST00000530886 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-214ENST00000530886 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
CSDE1-214ENST00000530886 PKHD1L1Q86WI1 4243 aa4.48□□□□□ -1.69
CSDE1-214ENST00000530886 SPINK1P00995 79 aa4.48□□□□□ -1.69
CSDE1-214ENST00000530886 SPINT4Q6UDR6 99 aa4.48□□□□□ -1.69
CSDE1-214ENST00000530886 CIRBP-AS1Q8TBR5 109 aa4.46□□□□□ -1.7
CSDE1-214ENST00000530886 SACSQ9NZJ4 4579 aa4.46□□□□□ -1.7
CSDE1-214ENST00000530886 PKHD1P08F94 4074 aa4.46□□□□□ -1.7
CSDE1-214ENST00000530886 FASNP49327 2511 aaKnown RBP4.46□□□□□ -1.7
CSDE1-214ENST00000530886 TPRXLQ17RH7 258 aa4.45□□□□□ -1.7
CSDE1-214ENST00000530886 CRIPTQ9P021 101 aa4.45□□□□□ -1.7
CSDE1-214ENST00000530886 TGP01266 2768 aa4.45□□□□□ -1.7
CSDE1-214ENST00000530886 COL6A5A8TX70 2615 aa4.45□□□□□ -1.7
CSDE1-214ENST00000530886 DNHD1Q96M86 4753 aa4.44□□□□□ -1.7
CSDE1-214ENST00000530886 Q8N1X5 172 aa4.43□□□□□ -1.7
CSDE1-214ENST00000530886 APLNQ9ULZ1 77 aa4.42□□□□□ -1.7
CSDE1-214ENST00000530886 STAB2Q8WWQ8 2551 aa4.41□□□□□ -1.7
CSDE1-214ENST00000530886 COX6B2Q6YFQ2 88 aa4.41□□□□□ -1.7
CSDE1-214ENST00000530886 STAB1Q9NY15 2570 aa4.4□□□□□ -1.71
CSDE1-214ENST00000530886 RPL37P61927 97 aaKnown RBP4.38□□□□□ -1.71
CSDE1-214ENST00000530886 UBE2DNLQ8IWF7 75 aa4.37□□□□□ -1.71
CSDE1-214ENST00000530886 KRTAP3-1Q9BYR8 98 aa4.37□□□□□ -1.71
CSDE1-214ENST00000530886 NBDYA0A0U1RRE5 68 aa4.36□□□□□ -1.71
CSDE1-214ENST00000530886 HYDINQ4G0P3 5121 aa4.35□□□□□ -1.71
CSDE1-214ENST00000530886 KRTAP13-2Q52LG2 175 aa4.35□□□□□ -1.71
CSDE1-214ENST00000530886 APOBP04114 4563 aaKnown RBP4.33□□□□□ -1.72
CSDE1-214ENST00000530886 TNXBP22105 4242 aa4.32□□□□□ -1.72
CSDE1-214ENST00000530886 KRTAP24-1Q3LI83 254 aa4.3□□□□□ -1.72
CSDE1-214ENST00000530886 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
CSDE1-214ENST00000530886 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
CSDE1-214ENST00000530886 FLG2Q5D862 2391 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-214ENST00000530886 KRTAP10-6P60371 365 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-214ENST00000530886 MYCBP2O75592 4640 aa4.28□□□□□ -1.72
CSDE1-214ENST00000530886 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
CSDE1-214ENST00000530886 HSPG2P98160 4391 aa4.25□□□□□ -1.73
CSDE1-214ENST00000530886 RPS29P62273 56 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms