RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 Q6ZR54 194 aa11.64□□□□□ -0.55
LTBP3-217ENST00000530785 VPS13DQ5THJ4 4388 aa11.64□□□□□ -0.55
LTBP3-217ENST00000530785 HRES1P13985 223 aa11.63□□□□□ -0.55
LTBP3-217ENST00000530785 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.62□□□□□ -0.55
LTBP3-217ENST00000530785 A0A087WTM6 91 aa11.61□□□□□ -0.55
LTBP3-217ENST00000530785 SRRM2Q9UQ35 2752 aaKnown RBP11.6□□□□□ -0.55
LTBP3-217ENST00000530785 SPACA4Q8TDM5 124 aa11.6□□□□□ -0.55
LTBP3-217ENST00000530785 KMT2AQ03164 3969 aa11.57□□□□□ -0.56
LTBP3-217ENST00000530785 KRTAP13-1Q8IUC0 172 aa11.56□□□□□ -0.56
LTBP3-217ENST00000530785 LINC01554Q52M75 96 aa11.55□□□□□ -0.56
LTBP3-217ENST00000530785 WWC2-AS2Q96NR7 200 aa11.55□□□□□ -0.56
LTBP3-217ENST00000530785 Q96NJ1 140 aa11.53□□□□□ -0.56
LTBP3-217ENST00000530785 RTL8CO15255 209 aa11.52□□□□□ -0.56
LTBP3-217ENST00000530785 LINC00313P59037 77 aa11.52□□□□□ -0.56
LTBP3-217ENST00000530785 C8orf17Q9NRJ1 99 aa11.51□□□□□ -0.57
LTBP3-217ENST00000530785 HECTD4Q9Y4D8 3996 aa11.5□□□□□ -0.57
LTBP3-217ENST00000530785 DNAH2Q9P225 4427 aa11.47□□□□□ -0.57
LTBP3-217ENST00000530785 PRAC1Q96KF2 57 aa11.44□□□□□ -0.58
LTBP3-217ENST00000530785 PLA2G1BP04054 148 aaKnown RBP11.42□□□□□ -0.58
LTBP3-217ENST00000530785 C1orf134Q5TEV5 83 aa11.42□□□□□ -0.58
LTBP3-217ENST00000530785 PSORS1C2Q9UIG4 136 aa11.41□□□□□ -0.58
LTBP3-217ENST00000530785 IGLV5-52A0A0A0MRZ9 124 aa11.41□□□□□ -0.58
LTBP3-217ENST00000530785 A0A1B0GVX0 72 aa11.41□□□□□ -0.58
LTBP3-217ENST00000530785 DNAH17Q9UFH2 4485 aa11.4□□□□□ -0.58
LTBP3-217ENST00000530785 HYDINQ4G0P3 5121 aa11.4□□□□□ -0.58
LTBP3-217ENST00000530785 MRPL34Q9BQ48 92 aaKnown RBP11.4□□□□□ -0.59
LTBP3-217ENST00000530785 LY6G6CO95867 125 aa11.39□□□□□ -0.59
LTBP3-217ENST00000530785 IGLV9-49A0A0B4J1Y8 123 aa11.38□□□□□ -0.59
LTBP3-217ENST00000530785 IGHV6-1A0A0B4J1U7 121 aa11.37□□□□□ -0.59
LTBP3-217ENST00000530785 LINC00483Q53H64 154 aa11.36□□□□□ -0.59
LTBP3-217ENST00000530785 ADM2Q7Z4H4 148 aa11.36□□□□□ -0.59
LTBP3-217ENST00000530785 ZNF706Q9Y5V0 76 aaPredicted RBP11.32□□□□□ -0.6
LTBP3-217ENST00000530785 A0A087X002 238 aa11.32□□□□□ -0.6
LTBP3-217ENST00000530785 ALMS1Q8TCU4 4167 aa11.31□□□□□ -0.6
LTBP3-217ENST00000530785 ZNF861PO60384 105 aa11.31□□□□□ -0.6
LTBP3-217ENST00000530785 DNAH8Q96JB1 4490 aa11.31□□□□□ -0.6
LTBP3-217ENST00000530785 FRAS1Q86XX4 4008 aa11.31□□□□□ -0.6
LTBP3-217ENST00000530785 ACYP2P14621 99 aa11.3□□□□□ -0.6
LTBP3-217ENST00000530785 KRTAP13-3Q3SY46 172 aa11.3□□□□□ -0.6
LTBP3-217ENST00000530785 SACSQ9NZJ4 4579 aa11.29□□□□□ -0.6
LTBP3-217ENST00000530785 NOTCH2NLQ7Z3S9 236 aa11.29□□□□□ -0.6
LTBP3-217ENST00000530785 ANAPC11Q9NYG5 84 aa11.29□□□□□ -0.6
LTBP3-217ENST00000530785 CDK2AP2O75956 126 aa11.28□□□□□ -0.6
LTBP3-217ENST00000530785 SPATA8Q6RVD6 105 aa11.27□□□□□ -0.61
LTBP3-217ENST00000530785 DNAH6Q9C0G6 4158 aa11.26□□□□□ -0.61
LTBP3-217ENST00000530785 Q5W150 140 aa11.26□□□□□ -0.61
LTBP3-217ENST00000530785 KRTAP10-2P60368 255 aa11.24□□□□□ -0.61
LTBP3-217ENST00000530785 KMT2CQ8NEZ4 4911 aaKnown RBP11.23□□□□□ -0.61
LTBP3-217ENST00000530785 IGLV7-43P04211 117 aa11.21□□□□□ -0.61
LTBP3-217ENST00000530785 DMAC1Q96GE9 116 aa11.21□□□□□ -0.61
LTBP3-217ENST00000530785 A0A1B0GU69 56 aa11.2□□□□□ -0.62
LTBP3-217ENST00000530785 DNAH5Q8TE73 4624 aa11.18□□□□□ -0.62
LTBP3-217ENST00000530785 CIRBP-AS1Q8TBR5 109 aa11.18□□□□□ -0.62
LTBP3-217ENST00000530785 RETNLBQ9BQ08 111 aa11.15□□□□□ -0.62
LTBP3-217ENST00000530785 DNAH11Q96DT5 4516 aa11.14□□□□□ -0.63
LTBP3-217ENST00000530785 MIR22HGQ0VDD5 57 aa11.13□□□□□ -0.63
LTBP3-217ENST00000530785 FAT2Q9NYQ8 4349 aa11.12□□□□□ -0.63
LTBP3-217ENST00000530785 UQCR11O14957 56 aa11.1□□□□□ -0.63
LTBP3-217ENST00000530785 KRTAP10-1P60331 282 aa11.08□□□□□ -0.64
LTBP3-217ENST00000530785 Q6ZSA8 131 aa11.08□□□□□ -0.64
LTBP3-217ENST00000530785 RYR2Q92736 4967 aa11.08□□□□□ -0.64
LTBP3-217ENST00000530785 PKD1P98161 4303 aa11.06□□□□□ -0.64
LTBP3-217ENST00000530785 CSAG1Q6PB30 78 aa11.03□□□□□ -0.64
LTBP3-217ENST00000530785 SPINK6Q6UWN8 80 aa11.01□□□□□ -0.65
LTBP3-217ENST00000530785 SSBP3-AS1Q7Z2R9 100 aa10.99□□□□□ -0.65
LTBP3-217ENST00000530785 RYR3Q15413 4870 aa10.98□□□□□ -0.65
LTBP3-217ENST00000530785 PKHD1P08F94 4074 aa10.98□□□□□ -0.65
LTBP3-217ENST00000530785 LRP1BQ9NZR2 4599 aa10.97□□□□□ -0.65
LTBP3-217ENST00000530785 IGKV2-30P06310 120 aa10.96□□□□□ -0.65
LTBP3-217ENST00000530785 FAM229AH3BQW9 127 aa10.96□□□□□ -0.66
LTBP3-217ENST00000530785 KRTAP13-2Q52LG2 175 aa10.94□□□□□ -0.66
LTBP3-217ENST00000530785 KRTAP1-4P0C5Y4 121 aa10.86□□□□□ -0.67
LTBP3-217ENST00000530785 VPS13BQ7Z7G8 4022 aa10.84□□□□□ -0.67
LTBP3-217ENST00000530785 ROMO1P60602 79 aa10.78□□□□□ -0.68
LTBP3-217ENST00000530785 A0A1B0GVY2 172 aa10.77□□□□□ -0.69
LTBP3-217ENST00000530785 DYNC1H1Q14204 4646 aaKnown RBP10.76□□□□□ -0.69
LTBP3-217ENST00000530785 IGKV2D-30A0A075B6S6 120 aa10.74□□□□□ -0.69
LTBP3-217ENST00000530785 KRTAP16-1A8MUX0 517 aa10.74□□□□□ -0.69
LTBP3-217ENST00000530785 TYMSOSQ8TAI1 123 aa10.69□□□□□ -0.7
LTBP3-217ENST00000530785 A0A0A0MQY5 61 aa10.69□□□□□ -0.7
LTBP3-217ENST00000530785 A8MUU9 505 aa10.69□□□□□ -0.7
LTBP3-217ENST00000530785 KRTAP25-1Q3LHN0 102 aa10.68□□□□□ -0.7
LTBP3-217ENST00000530785 SMR3BP02814 79 aaPredicted RBP10.63□□□□□ -0.71
LTBP3-217ENST00000530785 APOBP04114 4563 aaKnown RBP10.63□□□□□ -0.71
LTBP3-217ENST00000530785 H0YAA0 97 aa10.62□□□□□ -0.71
LTBP3-217ENST00000530785 SPINK1P00995 79 aa10.62□□□□□ -0.71
LTBP3-217ENST00000530785 LINC00304Q8N9R0 145 aa10.6□□□□□ -0.71
LTBP3-217ENST00000530785 EPPK1P58107 5090 aaKnown RBP10.6□□□□□ -0.71
LTBP3-217ENST00000530785 FAT1Q14517 4588 aa10.56□□□□□ -0.72
LTBP3-217ENST00000530785 KRTAP10-4P60372 401 aaPredicted RBP10.51□□□□□ -0.73
LTBP3-217ENST00000530785 Q8N1X5 172 aa10.5□□□□□ -0.73
LTBP3-217ENST00000530785 RPS29P62273 56 aaKnown RBP10.49□□□□□ -0.73
LTBP3-217ENST00000530785 P0C880 135 aa10.47□□□□□ -0.73
LTBP3-217ENST00000530785 HSPG2P98160 4391 aa10.45□□□□□ -0.74
LTBP3-217ENST00000530785 KIAA1109Q2LD37 5005 aa10.44□□□□□ -0.74
LTBP3-217ENST00000530785 A0A1B0GU33 70 aa10.43□□□□□ -0.74
LTBP3-217ENST00000530785 H1FX-AS1Q4G0G2 97 aa10.39□□□□□ -0.75
LTBP3-217ENST00000530785 RYR1P21817 5038 aa10.39□□□□□ -0.75
LTBP3-217ENST00000530785 PKHD1L1Q86WI1 4243 aa10.36□□□□□ -0.75
LTBP3-217ENST00000530785 KRTAP17-1Q9BYP8 105 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms