RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 A0A1B0GVX0 72 aa4.42□□□□□ -1.7
C11orf54-207ENST00000528288 C1orf134Q5TEV5 83 aa4.42□□□□□ -1.7
C11orf54-207ENST00000528288 ALMS1Q8TCU4 4167 aa4.42□□□□□ -1.7
C11orf54-207ENST00000528288 Q1T7F1 81 aa4.41□□□□□ -1.7
C11orf54-207ENST00000528288 Q6ZR54 194 aa4.41□□□□□ -1.7
C11orf54-207ENST00000528288 PLAC8Q9NZF1 115 aa4.41□□□□□ -1.7
C11orf54-207ENST00000528288 KRTAP10-2P60368 255 aa4.41□□□□□ -1.7
C11orf54-207ENST00000528288 ZNF706Q9Y5V0 76 aaPredicted RBP4.4□□□□□ -1.7
C11orf54-207ENST00000528288 COA5Q86WW8 74 aa4.4□□□□□ -1.71
C11orf54-207ENST00000528288 DNAH5Q8TE73 4624 aa4.4□□□□□ -1.71
C11orf54-207ENST00000528288 IGLV7-43P04211 117 aa4.39□□□□□ -1.71
C11orf54-207ENST00000528288 PRR15LQ9BU68 103 aa4.39□□□□□ -1.71
C11orf54-207ENST00000528288 Q5W150 140 aa4.39□□□□□ -1.71
C11orf54-207ENST00000528288 MRPL34Q9BQ48 92 aaKnown RBP4.39□□□□□ -1.71
C11orf54-207ENST00000528288 LRP1BQ9NZR2 4599 aa4.39□□□□□ -1.71
C11orf54-207ENST00000528288 HYDINQ4G0P3 5121 aa4.38□□□□□ -1.71
C11orf54-207ENST00000528288 H3BPC8 53 aa4.38□□□□□ -1.71
C11orf54-207ENST00000528288 Q8N9P0 234 aaPredicted RBP4.38□□□□□ -1.71
C11orf54-207ENST00000528288 SPANXA2-OT1Q8N9U9 137 aa4.38□□□□□ -1.71
C11orf54-207ENST00000528288 CHKB-CPT1BH3BT56 60 aa4.37□□□□□ -1.71
C11orf54-207ENST00000528288 Q5VV11 94 aa4.37□□□□□ -1.71
C11orf54-207ENST00000528288 SPAG11AQ6PDA7 123 aa4.37□□□□□ -1.71
C11orf54-207ENST00000528288 ASB16-AS1Q495Z4 193 aa4.37□□□□□ -1.71
C11orf54-207ENST00000528288 IGLV7-46A0A075B6I9 117 aa4.36□□□□□ -1.71
C11orf54-207ENST00000528288 C1orf195Q5TG92 126 aa4.35□□□□□ -1.71
C11orf54-207ENST00000528288 TP53AIP1Q9HCN2 124 aa4.35□□□□□ -1.71
C11orf54-207ENST00000528288 HRES1P13985 223 aa4.33□□□□□ -1.72
C11orf54-207ENST00000528288 KRTAP10-1P60331 282 aa4.33□□□□□ -1.72
C11orf54-207ENST00000528288 PRR26Q8N8Z3 221 aa4.32□□□□□ -1.72
C11orf54-207ENST00000528288 SPTSSBQ8NFR3 76 aa4.32□□□□□ -1.72
C11orf54-207ENST00000528288 J3QL48 77 aa4.32□□□□□ -1.72
C11orf54-207ENST00000528288 KRTAP13-2Q52LG2 175 aa4.32□□□□□ -1.72
C11orf54-207ENST00000528288 VPS13BQ7Z7G8 4022 aa4.32□□□□□ -1.72
C11orf54-207ENST00000528288 A6NED7 52 aa4.31□□□□□ -1.72
C11orf54-207ENST00000528288 V9GYY9 64 aa4.31□□□□□ -1.72
C11orf54-207ENST00000528288 FAT2Q9NYQ8 4349 aa4.3□□□□□ -1.72
C11orf54-207ENST00000528288 LIMD2Q9BT23 127 aa4.3□□□□□ -1.72
C11orf54-207ENST00000528288 PKD1P98161 4303 aa4.3□□□□□ -1.72
C11orf54-207ENST00000528288 LINC00313P59037 77 aa4.29□□□□□ -1.72
C11orf54-207ENST00000528288 LCA10Q71F78 164 aa4.29□□□□□ -1.72
C11orf54-207ENST00000528288 PKHD1P08F94 4074 aa4.28□□□□□ -1.72
C11orf54-207ENST00000528288 SSBP3-AS1Q7Z2R9 100 aa4.28□□□□□ -1.72
C11orf54-207ENST00000528288 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
C11orf54-207ENST00000528288 KRTAP13-3Q3SY46 172 aa4.27□□□□□ -1.73
C11orf54-207ENST00000528288 LOC101927531A0A1B0GV80 90 aa4.26□□□□□ -1.73
C11orf54-207ENST00000528288 SPINK7P58062 85 aa4.26□□□□□ -1.73
C11orf54-207ENST00000528288 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
C11orf54-207ENST00000528288 IGKV2-30P06310 120 aa4.26□□□□□ -1.73
C11orf54-207ENST00000528288 PLA2G1BP04054 148 aaKnown RBP4.25□□□□□ -1.73
C11orf54-207ENST00000528288 SMR3BP02814 79 aaPredicted RBP4.24□□□□□ -1.73
C11orf54-207ENST00000528288 Q75L30 129 aa4.24□□□□□ -1.73
C11orf54-207ENST00000528288 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
C11orf54-207ENST00000528288 LINC01558Q9Y6Z2 57 aa4.24□□□□□ -1.73
C11orf54-207ENST00000528288 C8orf87E5RJ46 101 aa4.22□□□□□ -1.73
C11orf54-207ENST00000528288 Q6ZSA8 131 aa4.22□□□□□ -1.73
C11orf54-207ENST00000528288 FAT1Q14517 4588 aa4.22□□□□□ -1.73
C11orf54-207ENST00000528288 TYMSOSQ8TAI1 123 aa4.21□□□□□ -1.73
C11orf54-207ENST00000528288 ACYP2P14621 99 aa4.21□□□□□ -1.74
C11orf54-207ENST00000528288 KRTAP16-1A8MUX0 517 aa4.21□□□□□ -1.74
C11orf54-207ENST00000528288 FAM229AH3BQW9 127 aa4.21□□□□□ -1.74
C11orf54-207ENST00000528288 SPINK1P00995 79 aa4.19□□□□□ -1.74
C11orf54-207ENST00000528288 SACSQ9NZJ4 4579 aa4.18□□□□□ -1.74
C11orf54-207ENST00000528288 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
C11orf54-207ENST00000528288 Q8N1X5 172 aa4.18□□□□□ -1.74
C11orf54-207ENST00000528288 DMAC1Q96GE9 116 aa4.17□□□□□ -1.74
C11orf54-207ENST00000528288 C9orf92A6NGG3 77 aa4.17□□□□□ -1.74
C11orf54-207ENST00000528288 DYNC1H1Q14204 4646 aaKnown RBP4.17□□□□□ -1.74
C11orf54-207ENST00000528288 C7orf65Q6ZTY9 151 aa4.16□□□□□ -1.74
C11orf54-207ENST00000528288 ATP11AUNQ6ZP68 121 aa4.16□□□□□ -1.74
C11orf54-207ENST00000528288 A0A1B0GU69 56 aa4.14□□□□□ -1.75
C11orf54-207ENST00000528288 SEC61GP60059 68 aa4.14□□□□□ -1.75
C11orf54-207ENST00000528288 A6NN06 94 aa4.14□□□□□ -1.75
C11orf54-207ENST00000528288 LINC00304Q8N9R0 145 aa4.13□□□□□ -1.75
C11orf54-207ENST00000528288 KRTAP21-3Q3LHN1 58 aa4.13□□□□□ -1.75
C11orf54-207ENST00000528288 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
C11orf54-207ENST00000528288 APOBP04114 4563 aaKnown RBP4.09□□□□□ -1.76
C11orf54-207ENST00000528288 ADM2Q7Z4H4 148 aa4.08□□□□□ -1.76
C11orf54-207ENST00000528288 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
C11orf54-207ENST00000528288 LCE2BO14633 110 aa4.06□□□□□ -1.76
C11orf54-207ENST00000528288 RBM12B-AS1Q9P1G2 102 aa4.06□□□□□ -1.76
C11orf54-207ENST00000528288 KMT2CQ8NEZ4 4911 aaKnown RBP4.06□□□□□ -1.76
C11orf54-207ENST00000528288 LRP1Q07954 4544 aaKnown RBP4.06□□□□□ -1.76
C11orf54-207ENST00000528288 MIR22HGQ0VDD5 57 aa4.05□□□□□ -1.76
C11orf54-207ENST00000528288 FLG2Q5D862 2391 aaPredicted RBP4.05□□□□□ -1.76
C11orf54-207ENST00000528288 DMBT1Q9UGM3 2413 aaPredicted RBP4.05□□□□□ -1.76
C11orf54-207ENST00000528288 PKHD1L1Q86WI1 4243 aa4.04□□□□□ -1.76
C11orf54-207ENST00000528288 MYCBP2O75592 4640 aa4.03□□□□□ -1.76
C11orf54-207ENST00000528288 UQCR11O14957 56 aa4.03□□□□□ -1.76
C11orf54-207ENST00000528288 SPATA8Q6RVD6 105 aa4.02□□□□□ -1.77
C11orf54-207ENST00000528288 LCE2CQ5TA81 110 aa4.01□□□□□ -1.77
C11orf54-207ENST00000528288 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
C11orf54-207ENST00000528288 KRTAP10-4P60372 401 aaPredicted RBP4.01□□□□□ -1.77
C11orf54-207ENST00000528288 RYR2Q92736 4967 aa4.01□□□□□ -1.77
C11orf54-207ENST00000528288 A0A1B0GVY2 172 aa4□□□□□ -1.77
C11orf54-207ENST00000528288 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
C11orf54-207ENST00000528288 A8MUU9 505 aa3.98□□□□□ -1.77
C11orf54-207ENST00000528288 HSPG2P98160 4391 aa3.98□□□□□ -1.77
C11orf54-207ENST00000528288 C20orf166-AS1Q96NR2 134 aa3.98□□□□□ -1.77
C11orf54-207ENST00000528288 RPS29P62273 56 aaKnown RBP3.96□□□□□ -1.77
C11orf54-207ENST00000528288 FAT3Q8TDW7 4589 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms