RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PTPN13Q12923 2485 aa2.45□□□□□ -2.02
HMGB1P19-201ENST00000517578 NAV2Q8IVL1 2488 aa2.45□□□□□ -2.02
HMGB1P19-201ENST00000517578 R4GN34 69 aa2.45□□□□□ -2.02
HMGB1P19-201ENST00000517578 CELSR2Q9HCU4 2923 aa2.45□□□□□ -2.02
HMGB1P19-201ENST00000517578 APCP25054 2843 aa2.45□□□□□ -2.02
HMGB1P19-201ENST00000517578 OTOGLQ3ZCN5 2332 aa2.45□□□□□ -2.02
HMGB1P19-201ENST00000517578 OTOGQ6ZRI0 2925 aa2.44□□□□□ -2.02
HMGB1P19-201ENST00000517578 RPS29P62273 56 aaKnown RBP2.44□□□□□ -2.02
HMGB1P19-201ENST00000517578 UBR5O95071 2799 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P19-201ENST00000517578 LAMA3Q16787 3333 aa2.44□□□□□ -2.02
HMGB1P19-201ENST00000517578 ZFHX2Q9C0A1 2572 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P19-201ENST00000517578 LRBAP50851 2863 aa2.43□□□□□ -2.02
HMGB1P19-201ENST00000517578 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
HMGB1P19-201ENST00000517578 DMDP11532 3685 aa2.43□□□□□ -2.02
HMGB1P19-201ENST00000517578 BRCA2P51587 3418 aa2.43□□□□□ -2.02
HMGB1P19-201ENST00000517578 BOD1L1Q8NFC6 3051 aa2.43□□□□□ -2.02
HMGB1P19-201ENST00000517578 WDFY3Q8IZQ1 3526 aa2.42□□□□□ -2.02
HMGB1P19-201ENST00000517578 HIVEP3Q5T1R4 2406 aa2.42□□□□□ -2.02
HMGB1P19-201ENST00000517578 VCANP13611 3396 aa2.42□□□□□ -2.02
HMGB1P19-201ENST00000517578 CDH23Q9H251 3354 aa2.42□□□□□ -2.02
HMGB1P19-201ENST00000517578 JMJD1CQ15652 2540 aa2.41□□□□□ -2.02
HMGB1P19-201ENST00000517578 DMXL1Q9Y485 3027 aa2.4□□□□□ -2.02
HMGB1P19-201ENST00000517578 SPEGQ15772 3267 aa2.4□□□□□ -2.02
HMGB1P19-201ENST00000517578 LCE3AQ5TA76 89 aa2.4□□□□□ -2.03
HMGB1P19-201ENST00000517578 MYO9AB2RTY4 2548 aa2.4□□□□□ -2.03
HMGB1P19-201ENST00000517578 ZFYVE26Q68DK2 2539 aa2.39□□□□□ -2.03
HMGB1P19-201ENST00000517578 ZFHX4Q86UP3 3567 aa2.39□□□□□ -2.03
HMGB1P19-201ENST00000517578 HRNRQ86YZ3 2850 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P19-201ENST00000517578 KRTAP12-1P59990 96 aa2.39□□□□□ -2.03
HMGB1P19-201ENST00000517578 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
HMGB1P19-201ENST00000517578 ZNF462Q96JM2 2506 aa2.39□□□□□ -2.03
HMGB1P19-201ENST00000517578 COL12A1Q99715 3063 aa2.39□□□□□ -2.03
HMGB1P19-201ENST00000517578 USP9XQ93008 2570 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P19-201ENST00000517578 CEP295Q9C0D2 2601 aa2.38□□□□□ -2.03
HMGB1P19-201ENST00000517578 TEX15Q9BXT5 2789 aa2.38□□□□□ -2.03
HMGB1P19-201ENST00000517578 SETXQ7Z333 2677 aaKnown RBP2.38□□□□□ -2.03
HMGB1P19-201ENST00000517578 DOPEY1Q5JWR5 2465 aa2.38□□□□□ -2.03
HMGB1P19-201ENST00000517578 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
HMGB1P19-201ENST00000517578 CSMD1Q96PZ7 3565 aa2.38□□□□□ -2.03
HMGB1P19-201ENST00000517578 CELSR3Q9NYQ7 3312 aa2.38□□□□□ -2.03
HMGB1P19-201ENST00000517578 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
HMGB1P19-201ENST00000517578 CCDC168Q8NDH2 2452 aa2.37□□□□□ -2.03
HMGB1P19-201ENST00000517578 ADGRG4Q8IZF6 3080 aa2.37□□□□□ -2.03
HMGB1P19-201ENST00000517578 DCHS2Q6V1P9 2916 aa2.37□□□□□ -2.03
HMGB1P19-201ENST00000517578 NF1P21359 2839 aa2.36□□□□□ -2.03
HMGB1P19-201ENST00000517578 UTP20O75691 2785 aaKnown RBP2.36□□□□□ -2.03
HMGB1P19-201ENST00000517578 MTORP42345 2549 aa2.36□□□□□ -2.03
HMGB1P19-201ENST00000517578 CENPEQ02224 2701 aa2.35□□□□□ -2.03
HMGB1P19-201ENST00000517578 MUC6Q6W4X9 2439 aa2.35□□□□□ -2.03
HMGB1P19-201ENST00000517578 ANKRD11Q6UB99 2663 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P19-201ENST00000517578 ATMQ13315 3056 aa2.34□□□□□ -2.03
HMGB1P19-201ENST00000517578 GCN1Q92616 2671 aaKnown RBP2.34□□□□□ -2.04
HMGB1P19-201ENST00000517578 KRTAP10-8P60410 259 aa2.33□□□□□ -2.04
HMGB1P19-201ENST00000517578 CELSR1Q9NYQ6 3014 aa2.33□□□□□ -2.04
HMGB1P19-201ENST00000517578 FAM208BQ5VWN6 2430 aa2.32□□□□□ -2.04
HMGB1P19-201ENST00000517578 COL6A5A8TX70 2615 aa2.32□□□□□ -2.04
HMGB1P19-201ENST00000517578 SPENQ96T58 3664 aaKnown RBP2.31□□□□□ -2.04
HMGB1P19-201ENST00000517578 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
HMGB1P19-201ENST00000517578 KRTAP13-2Q52LG2 175 aa2.31□□□□□ -2.04
HMGB1P19-201ENST00000517578 CHD8Q9HCK8 2581 aa2.31□□□□□ -2.04
HMGB1P19-201ENST00000517578 UNC79Q9P2D8 2635 aa2.31□□□□□ -2.04
HMGB1P19-201ENST00000517578 NBEAL2Q6ZNJ1 2754 aa2.31□□□□□ -2.04
HMGB1P19-201ENST00000517578 PKD1L2Q7Z442 2459 aa2.3□□□□□ -2.04
HMGB1P19-201ENST00000517578 NOTCH2Q04721 2471 aa2.3□□□□□ -2.04
HMGB1P19-201ENST00000517578 PIEZO1Q92508 2521 aa2.3□□□□□ -2.04
HMGB1P19-201ENST00000517578 HELZ2Q9BYK8 2649 aaKnown RBP2.3□□□□□ -2.04
HMGB1P19-201ENST00000517578 LOC400499M0QZD8 3231 aa2.3□□□□□ -2.04
HMGB1P19-201ENST00000517578 SMG1Q96Q15 3661 aaKnown RBP2.3□□□□□ -2.04
HMGB1P19-201ENST00000517578 Q5VSD8 79 aa2.29□□□□□ -2.04
HMGB1P19-201ENST00000517578 ACANP16112 2415 aa2.28□□□□□ -2.04
HMGB1P19-201ENST00000517578 SRRM2Q9UQ35 2752 aaKnown RBP2.27□□□□□ -2.05
HMGB1P19-201ENST00000517578 TTC28Q96AY4 2481 aa2.27□□□□□ -2.05
HMGB1P19-201ENST00000517578 USP9YO00507 2555 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P19-201ENST00000517578 CRYBG3Q68DQ2 2970 aa2.26□□□□□ -2.05
HMGB1P19-201ENST00000517578 VWFP04275 2813 aa2.26□□□□□ -2.05
HMGB1P19-201ENST00000517578 ACACBO00763 2458 aa2.26□□□□□ -2.05
HMGB1P19-201ENST00000517578 KRTAP1-4P0C5Y4 121 aa2.25□□□□□ -2.05
HMGB1P19-201ENST00000517578 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P19-201ENST00000517578 MEGF8Q7Z7M0 2845 aa2.25□□□□□ -2.05
HMGB1P19-201ENST00000517578 MXRA5Q9NR99 2828 aa2.25□□□□□ -2.05
HMGB1P19-201ENST00000517578 LRRK2Q5S007 2527 aa2.25□□□□□ -2.05
HMGB1P19-201ENST00000517578 DMBT1Q9UGM3 2413 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P19-201ENST00000517578 CFAP46Q8IYW2 2715 aa2.24□□□□□ -2.05
HMGB1P19-201ENST00000517578 HECTD1Q9ULT8 2610 aa2.23□□□□□ -2.05
HMGB1P19-201ENST00000517578 ABCA12Q86UK0 2595 aa2.23□□□□□ -2.05
HMGB1P19-201ENST00000517578 EPG5Q9HCE0 2579 aa2.23□□□□□ -2.05
HMGB1P19-201ENST00000517578 MYO15AQ9UKN7 3530 aa2.23□□□□□ -2.05
HMGB1P19-201ENST00000517578 TENM4Q6N022 2769 aa2.22□□□□□ -2.05
HMGB1P19-201ENST00000517578 FASNP49327 2511 aaKnown RBP2.22□□□□□ -2.05
HMGB1P19-201ENST00000517578 TGP01266 2768 aa2.22□□□□□ -2.05
HMGB1P19-201ENST00000517578 BAHCC1Q9P281 2608 aa2.21□□□□□ -2.05
HMGB1P19-201ENST00000517578 NIPBLQ6KC79 2804 aaeCLIP2.21□□□□□ -2.06
HMGB1P19-201ENST00000517578 C9orf92A6NGG3 77 aa2.21□□□□□ -2.06
HMGB1P19-201ENST00000517578 LAMA5O15230 3695 aa2.2□□□□□ -2.06
HMGB1P19-201ENST00000517578 POLQO75417 2590 aa2.2□□□□□ -2.06
HMGB1P19-201ENST00000517578 ASPMQ8IZT6 3477 aa2.19□□□□□ -2.06
HMGB1P19-201ENST00000517578 TNP1P09430 55 aa2.19□□□□□ -2.06
HMGB1P19-201ENST00000517578 AKAP9Q99996 3911 aa2.19□□□□□ -2.06
HMGB1P19-201ENST00000517578 FBN1P35555 2871 aaKnown RBP2.19□□□□□ -2.06
HMGB1P19-201ENST00000517578 SETD2Q9BYW2 2564 aaPredicted RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms