RNA–Protein interactions for RNA: ENST00000516960.1

RNU6-943P-201, Transcript of RNA, U6 small nuclear 943, pseudogene, humanhuman

BASIC

Gene RNU6-943P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-943P-201ENST00000516960 A0A1B0GUL6 1792 aa0.4□□□□□ -2.35
RNU6-943P-201ENST00000516960 COL7A1Q02388 2944 aa0.4□□□□□ -2.35
RNU6-943P-201ENST00000516960 NOP10Q9NPE3 64 aaKnown RBP0.4□□□□□ -2.35
RNU6-943P-201ENST00000516960 IGLV5-48A0A075B6I7 105 aa0.39□□□□□ -2.35
RNU6-943P-201ENST00000516960 KAAG1Q9UBP8 84 aa0.39□□□□□ -2.35
RNU6-943P-201ENST00000516960 HSPG2P98160 4391 aa0.38□□□□□ -2.35
RNU6-943P-201ENST00000516960 SPTBN4Q9H254 2564 aa0.38□□□□□ -2.35
RNU6-943P-201ENST00000516960 NF1P21359 2839 aa0.37□□□□□ -2.35
RNU6-943P-201ENST00000516960 KIF21BO75037 1637 aa0.37□□□□□ -2.35
RNU6-943P-201ENST00000516960 FSIP2Q5CZC0 6907 aa0.36□□□□□ -2.35
RNU6-943P-201ENST00000516960 LINC01546A6NGU7 62 aa0.36□□□□□ -2.35
RNU6-943P-201ENST00000516960 WFDC10BQ8IUB3 73 aa0.35□□□□□ -2.35
RNU6-943P-201ENST00000516960 HMCN2Q8NDA2 5059 aa0.34□□□□□ -2.35
RNU6-943P-201ENST00000516960 MACF1Q9UPN3 7388 aaKnown RBP0.34□□□□□ -2.36
RNU6-943P-201ENST00000516960 IQGAP1P46940 1657 aa0.33□□□□□ -2.36
RNU6-943P-201ENST00000516960 TFF3Q07654 80 aa0.33□□□□□ -2.36
RNU6-943P-201ENST00000516960 COL6A3P12111 3177 aa0.33□□□□□ -2.36
RNU6-943P-201ENST00000516960 HECTD4Q9Y4D8 3996 aa0.32□□□□□ -2.36
RNU6-943P-201ENST00000516960 LYSTQ99698 3801 aa0.32□□□□□ -2.36
RNU6-943P-201ENST00000516960 SPRR2AP35326 72 aa0.31□□□□□ -2.36
RNU6-943P-201ENST00000516960 TENM2Q9NT68 2774 aa0.3□□□□□ -2.36
RNU6-943P-201ENST00000516960 KRTAP6-2Q3LI66 62 aa0.3□□□□□ -2.36
RNU6-943P-201ENST00000516960 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
RNU6-943P-201ENST00000516960 DDX60Q8IY21 1712 aaKnown RBP0.29□□□□□ -2.36
RNU6-943P-201ENST00000516960 GCN1Q92616 2671 aaKnown RBP0.29□□□□□ -2.36
RNU6-943P-201ENST00000516960 SONP18583 2426 aaKnown RBP0.28□□□□□ -2.36
RNU6-943P-201ENST00000516960 SETD2Q9BYW2 2564 aaPredicted RBP0.27□□□□□ -2.37
RNU6-943P-201ENST00000516960 SMIM2Q9BVW6 85 aa0.27□□□□□ -2.37
RNU6-943P-201ENST00000516960 MTORP42345 2549 aa0.27□□□□□ -2.37
RNU6-943P-201ENST00000516960 PKD1P98161 4303 aa0.27□□□□□ -2.37
RNU6-943P-201ENST00000516960 SPG11Q96JI7 2443 aa0.26□□□□□ -2.37
RNU6-943P-201ENST00000516960 FAM208AQ9UK61 1670 aaKnown RBP0.25□□□□□ -2.37
RNU6-943P-201ENST00000516960 IQGAP2Q13576 1575 aa0.25□□□□□ -2.37
RNU6-943P-201ENST00000516960 SPRR2GQ9BYE4 73 aa0.25□□□□□ -2.37
RNU6-943P-201ENST00000516960 ZZEF1O43149 2961 aa0.25□□□□□ -2.37
RNU6-943P-201ENST00000516960 STAB1Q9NY15 2570 aa0.24□□□□□ -2.37
RNU6-943P-201ENST00000516960 MMP24-AS1A0A0U1RRL7 71 aa0.23□□□□□ -2.37
RNU6-943P-201ENST00000516960 TOMM5Q8N4H5 51 aa0.23□□□□□ -2.37
RNU6-943P-201ENST00000516960 M0QY20 66 aa0.22□□□□□ -2.37
RNU6-943P-201ENST00000516960 NFAT5O94916 1531 aa0.22□□□□□ -2.37
RNU6-943P-201ENST00000516960 PDZD2O15018 2839 aa0.22□□□□□ -2.37
RNU6-943P-201ENST00000516960 LRP1BQ9NZR2 4599 aa0.21□□□□□ -2.38
RNU6-943P-201ENST00000516960 ZANQ9Y493 2812 aa0.21□□□□□ -2.38
RNU6-943P-201ENST00000516960 LRP2P98164 4655 aa0.21□□□□□ -2.38
RNU6-943P-201ENST00000516960 DMXL1Q9Y485 3027 aa0.21□□□□□ -2.38
RNU6-943P-201ENST00000516960 MAP1AP78559 2803 aaPredicted RBP0.2□□□□□ -2.38
RNU6-943P-201ENST00000516960 LRRK2Q5S007 2527 aa0.19□□□□□ -2.38
RNU6-943P-201ENST00000516960 ANKHD1Q8IWZ3 2542 aaKnown RBP0.19□□□□□ -2.38
RNU6-943P-201ENST00000516960 PKHD1P08F94 4074 aa0.19□□□□□ -2.38
RNU6-943P-201ENST00000516960 DEFB110Q30KQ9 67 aa0.19□□□□□ -2.38
RNU6-943P-201ENST00000516960 SRRM2Q9UQ35 2752 aaKnown RBP0.18□□□□□ -2.38
RNU6-943P-201ENST00000516960 EPG5Q9HCE0 2579 aa0.18□□□□□ -2.38
RNU6-943P-201ENST00000516960 ANKRD11Q6UB99 2663 aaPredicted RBP0.18□□□□□ -2.38
RNU6-943P-201ENST00000516960 SPRR2EP22531 72 aa0.17□□□□□ -2.38
RNU6-943P-201ENST00000516960 VPS13BQ7Z7G8 4022 aa0.16□□□□□ -2.38
RNU6-943P-201ENST00000516960 DEFB131AP59861 70 aa0.16□□□□□ -2.38
RNU6-943P-201ENST00000516960 FASNP49327 2511 aaKnown RBP0.15□□□□□ -2.39
RNU6-943P-201ENST00000516960 MT1AP04731 61 aa0.15□□□□□ -2.39
RNU6-943P-201ENST00000516960 STAB2Q8WWQ8 2551 aa0.15□□□□□ -2.39
RNU6-943P-201ENST00000516960 ACACAQ13085 2346 aa0.15□□□□□ -2.39
RNU6-943P-201ENST00000516960 TNP1P09430 55 aa0.14□□□□□ -2.39
RNU6-943P-201ENST00000516960 UTP20O75691 2785 aaKnown RBP0.13□□□□□ -2.39
RNU6-943P-201ENST00000516960 A8MTW9 85 aa0.13□□□□□ -2.39
RNU6-943P-201ENST00000516960 NBEAL1Q6ZS30 2694 aa0.13□□□□□ -2.39
RNU6-943P-201ENST00000516960 TACC2O95359 2948 aa0.13□□□□□ -2.39
RNU6-943P-201ENST00000516960 TRPM2O94759 1503 aa0.13□□□□□ -2.39
RNU6-943P-201ENST00000516960 SVEP1Q4LDE5 3571 aa0.12□□□□□ -2.39
RNU6-943P-201ENST00000516960 CUBNO60494 3623 aa0.11□□□□□ -2.39
RNU6-943P-201ENST00000516960 SSPOA2VEC9 5147 aa0.1□□□□□ -2.39
RNU6-943P-201ENST00000516960 FAM186AA6NE01 2351 aa0.1□□□□□ -2.39
RNU6-943P-201ENST00000516960 NDUFA1O15239 70 aa0.09□□□□□ -2.4
RNU6-943P-201ENST00000516960 RIF1Q5UIP0 2472 aaKnown RBP0.09□□□□□ -2.4
RNU6-943P-201ENST00000516960 TGP01266 2768 aa0.09□□□□□ -2.4
RNU6-943P-201ENST00000516960 FLGP20930 4061 aaPredicted RBP0.08□□□□□ -2.4
RNU6-943P-201ENST00000516960 M0QZ58 72 aa0.08□□□□□ -2.4
RNU6-943P-201ENST00000516960 DNAH9Q9NYC9 4486 aa0.08□□□□□ -2.4
RNU6-943P-201ENST00000516960 TEP1Q99973 2627 aaKnown RBP0.07□□□□□ -2.4
RNU6-943P-201ENST00000516960 CLTCL1P53675 1640 aa0.06□□□□□ -2.4
RNU6-943P-201ENST00000516960 SPRR2FQ96RM1 72 aa0.06□□□□□ -2.4
RNU6-943P-201ENST00000516960 HIVEP1P15822 2718 aa0.05□□□□□ -2.4
RNU6-943P-201ENST00000516960 SACSQ9NZJ4 4579 aa0.04□□□□□ -2.4
RNU6-943P-201ENST00000516960 ANK3Q12955 4377 aaKnown RBP0.04□□□□□ -2.4
RNU6-943P-201ENST00000516960 ACACBO00763 2458 aa0.04□□□□□ -2.4
RNU6-943P-201ENST00000516960 NBEAQ8NFP9 2946 aa0.02□□□□□ -2.41
RNU6-943P-201ENST00000516960 MYO18BQ8IUG5 2567 aa0.01□□□□□ -2.41
RNU6-943P-201ENST00000516960 NBEAL2Q6ZNJ1 2754 aa0.01□□□□□ -2.41
RNU6-943P-201ENST00000516960 KALRNO60229 2985 aa0.01□□□□□ -2.41
RNU6-943P-201ENST00000516960 A0A0C4DFX4 3053 aa0.01□□□□□ -2.41
RNU6-943P-201ENST00000516960 HTTP42858 3142 aa0.01□□□□□ -2.41
RNU6-943P-201ENST00000516960 PKHD1L1Q86WI1 4243 aa0□□□□□ -2.41
RNU6-943P-201ENST00000516960 DNAH3Q8TD57 4116 aa0□□□□□ -2.41
RNU6-943P-201ENST00000516960 ATP7AQ04656 1500 aa-0.02□□□□□ -2.41
RNU6-943P-201ENST00000516960 MXRA5Q9NR99 2828 aa-0.05□□□□□ -2.42
RNU6-943P-201ENST00000516960 CCDC168Q8NDH2 2452 aa-0.05□□□□□ -2.42
RNU6-943P-201ENST00000516960 FAT3Q8TDW7 4589 aa-0.05□□□□□ -2.42
RNU6-943P-201ENST00000516960 AKAP9Q99996 3911 aa-0.06□□□□□ -2.42
RNU6-943P-201ENST00000516960 MGAM2Q2M2H8 2515 aa-0.06□□□□□ -2.42
RNU6-943P-201ENST00000516960 RANBP2P49792 3224 aaKnown RBP-0.06□□□□□ -2.42
RNU6-943P-201ENST00000516960 COL6A5A8TX70 2615 aa-0.08□□□□□ -2.42
RNU6-943P-201ENST00000516960 POLR2KP53803 58 aaKnown RBP-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms