RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 TPRP12270 2363 aaKnown RBP1.96□□□□□ -2.1
HMGCR-213ENST00000515776 TACC2O95359 2948 aa1.96□□□□□ -2.1
HMGCR-213ENST00000515776 SMG1Q96Q15 3661 aaKnown RBP1.96□□□□□ -2.1
HMGCR-213ENST00000515776 ABCA2Q9BZC7 2435 aa1.96□□□□□ -2.1
HMGCR-213ENST00000515776 A0A0D9SG42 100 aa1.95□□□□□ -2.1
HMGCR-213ENST00000515776 APLNQ9ULZ1 77 aa1.95□□□□□ -2.1
HMGCR-213ENST00000515776 COL12A1Q99715 3063 aa1.95□□□□□ -2.1
HMGCR-213ENST00000515776 CDH23Q9H251 3354 aa1.95□□□□□ -2.1
HMGCR-213ENST00000515776 TRANK1O15050 2925 aa1.94□□□□□ -2.1
HMGCR-213ENST00000515776 LAMA5O15230 3695 aa1.94□□□□□ -2.1
HMGCR-213ENST00000515776 PRRC2CQ9Y520 2896 aaKnown RBP1.93□□□□□ -2.1
HMGCR-213ENST00000515776 INE1O15225 51 aa1.93□□□□□ -2.1
HMGCR-213ENST00000515776 DEFB135Q30KP9 77 aa1.93□□□□□ -2.1
HMGCR-213ENST00000515776 REV3LO60673 3130 aa1.93□□□□□ -2.1
HMGCR-213ENST00000515776 LOC400499M0QZD8 3231 aa1.93□□□□□ -2.1
HMGCR-213ENST00000515776 DMXL1Q9Y485 3027 aa1.92□□□□□ -2.1
HMGCR-213ENST00000515776 DEFB123Q8N688 67 aa1.92□□□□□ -2.1
HMGCR-213ENST00000515776 CELSR1Q9NYQ6 3014 aa1.92□□□□□ -2.1
HMGCR-213ENST00000515776 NBPF19A0A087WUL8 3843 aa1.92□□□□□ -2.1
HMGCR-213ENST00000515776 FBN1P35555 2871 aaKnown RBP1.92□□□□□ -2.1
HMGCR-213ENST00000515776 VPS13DQ5THJ4 4388 aa1.91□□□□□ -2.1
HMGCR-213ENST00000515776 DEFB124Q8NES8 71 aa1.91□□□□□ -2.1
HMGCR-213ENST00000515776 DCHS2Q6V1P9 2916 aa1.91□□□□□ -2.1
HMGCR-213ENST00000515776 GVINP1Q7Z2Y8 2422 aa1.91□□□□□ -2.1
HMGCR-213ENST00000515776 UBR5O95071 2799 aaPredicted RBP1.91□□□□□ -2.1
HMGCR-213ENST00000515776 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
HMGCR-213ENST00000515776 UBE2DNLQ8IWF7 75 aa1.9□□□□□ -2.11
HMGCR-213ENST00000515776 NCOR2Q9Y618 2525 aa1.9□□□□□ -2.11
HMGCR-213ENST00000515776 CRYBG3Q68DQ2 2970 aa1.9□□□□□ -2.11
HMGCR-213ENST00000515776 LRBAP50851 2863 aa1.9□□□□□ -2.11
HMGCR-213ENST00000515776 ATMQ13315 3056 aa1.89□□□□□ -2.11
HMGCR-213ENST00000515776 CELSR3Q9NYQ7 3312 aa1.88□□□□□ -2.11
HMGCR-213ENST00000515776 SPG11Q96JI7 2443 aa1.88□□□□□ -2.11
HMGCR-213ENST00000515776 NF1P21359 2839 aa1.88□□□□□ -2.11
HMGCR-213ENST00000515776 HRNRQ86YZ3 2850 aaPredicted RBP1.87□□□□□ -2.11
HMGCR-213ENST00000515776 DNAH1Q9P2D7 4330 aa1.87□□□□□ -2.11
HMGCR-213ENST00000515776 CACNA1HO95180 2353 aa1.86□□□□□ -2.11
HMGCR-213ENST00000515776 SPRR5A0A1B0GTR4 108 aa1.86□□□□□ -2.11
HMGCR-213ENST00000515776 MYO15AQ9UKN7 3530 aa1.86□□□□□ -2.11
HMGCR-213ENST00000515776 TEX15Q9BXT5 2789 aa1.85□□□□□ -2.11
HMGCR-213ENST00000515776 NBASA2RRP1 2371 aa1.85□□□□□ -2.11
HMGCR-213ENST00000515776 HIVEP2P31629 2446 aa1.85□□□□□ -2.11
HMGCR-213ENST00000515776 FN1P02751 2386 aaKnown RBP1.84□□□□□ -2.12
HMGCR-213ENST00000515776 APCP25054 2843 aa1.83□□□□□ -2.12
HMGCR-213ENST00000515776 VWFP04275 2813 aa1.83□□□□□ -2.12
HMGCR-213ENST00000515776 ASPMQ8IZT6 3477 aa1.83□□□□□ -2.12
HMGCR-213ENST00000515776 RELNP78509 3460 aa1.82□□□□□ -2.12
HMGCR-213ENST00000515776 SETXQ7Z333 2677 aaKnown RBP1.82□□□□□ -2.12
HMGCR-213ENST00000515776 F8P00451 2351 aa1.82□□□□□ -2.12
HMGCR-213ENST00000515776 SPTAN1Q13813 2472 aaKnown RBP1.82□□□□□ -2.12
HMGCR-213ENST00000515776 MYCBP2O75592 4640 aa1.82□□□□□ -2.12
HMGCR-213ENST00000515776 CSPG4Q6UVK1 2322 aa1.82□□□□□ -2.12
HMGCR-213ENST00000515776 FRAS1Q86XX4 4008 aa1.81□□□□□ -2.12
HMGCR-213ENST00000515776 MUC6Q6W4X9 2439 aa1.81□□□□□ -2.12
HMGCR-213ENST00000515776 ANKHD1Q8IWZ3 2542 aaKnown RBP1.81□□□□□ -2.12
HMGCR-213ENST00000515776 DNAH11Q96DT5 4516 aa1.81□□□□□ -2.12
HMGCR-213ENST00000515776 HIVEP3Q5T1R4 2406 aa1.8□□□□□ -2.12
HMGCR-213ENST00000515776 CREBBPQ92793 2442 aa1.8□□□□□ -2.12
HMGCR-213ENST00000515776 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
HMGCR-213ENST00000515776 TRRAPQ9Y4A5 3859 aa1.8□□□□□ -2.12
HMGCR-213ENST00000515776 SRRM2Q9UQ35 2752 aaKnown RBP1.8□□□□□ -2.12
HMGCR-213ENST00000515776 RIF1Q5UIP0 2472 aaKnown RBP1.79□□□□□ -2.12
HMGCR-213ENST00000515776 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
HMGCR-213ENST00000515776 CCDC168Q8NDH2 2452 aa1.79□□□□□ -2.12
HMGCR-213ENST00000515776 MEGF8Q7Z7M0 2845 aa1.79□□□□□ -2.12
HMGCR-213ENST00000515776 PTPN13Q12923 2485 aa1.78□□□□□ -2.12
HMGCR-213ENST00000515776 KRTAP13-2Q52LG2 175 aa1.78□□□□□ -2.12
HMGCR-213ENST00000515776 OTOGLQ3ZCN5 2332 aa1.78□□□□□ -2.13
HMGCR-213ENST00000515776 SVEP1Q4LDE5 3571 aa1.78□□□□□ -2.13
HMGCR-213ENST00000515776 DNAH8Q96JB1 4490 aa1.78□□□□□ -2.13
HMGCR-213ENST00000515776 BAHCC1Q9P281 2608 aa1.77□□□□□ -2.13
HMGCR-213ENST00000515776 CEP290O15078 2479 aa1.77□□□□□ -2.13
HMGCR-213ENST00000515776 BSNQ9UPA5 3926 aa1.77□□□□□ -2.13
HMGCR-213ENST00000515776 ANK3Q12955 4377 aaKnown RBP1.77□□□□□ -2.13
HMGCR-213ENST00000515776 COL6A5A8TX70 2615 aa1.77□□□□□ -2.13
HMGCR-213ENST00000515776 VPS13CQ709C8 3753 aa1.77□□□□□ -2.13
HMGCR-213ENST00000515776 CSMD3Q7Z407 3707 aa1.76□□□□□ -2.13
HMGCR-213ENST00000515776 M0QZ58 72 aa1.76□□□□□ -2.13
HMGCR-213ENST00000515776 ADGRG4Q8IZF6 3080 aa1.76□□□□□ -2.13
HMGCR-213ENST00000515776 USP9XQ93008 2570 aaPredicted RBP1.75□□□□□ -2.13
HMGCR-213ENST00000515776 ZNF462Q96JM2 2506 aa1.75□□□□□ -2.13
HMGCR-213ENST00000515776 TLN1Q9Y490 2541 aaKnown RBP1.75□□□□□ -2.13
HMGCR-213ENST00000515776 UTP20O75691 2785 aaKnown RBP1.74□□□□□ -2.13
HMGCR-213ENST00000515776 JMJD1CQ15652 2540 aa1.74□□□□□ -2.13
HMGCR-213ENST00000515776 NAV2Q8IVL1 2488 aa1.74□□□□□ -2.13
HMGCR-213ENST00000515776 DNAH10Q8IVF4 4471 aa1.73□□□□□ -2.13
HMGCR-213ENST00000515776 NBEAL2Q6ZNJ1 2754 aa1.73□□□□□ -2.13
HMGCR-213ENST00000515776 TLN2Q9Y4G6 2542 aa1.73□□□□□ -2.13
HMGCR-213ENST00000515776 EYSQ5T1H1 3165 aa1.73□□□□□ -2.13
HMGCR-213ENST00000515776 DNAH17Q9UFH2 4485 aa1.73□□□□□ -2.13
HMGCR-213ENST00000515776 ANK2Q01484 3957 aa1.73□□□□□ -2.13
HMGCR-213ENST00000515776 HECTD1Q9ULT8 2610 aa1.72□□□□□ -2.13
HMGCR-213ENST00000515776 CUBNO60494 3623 aa1.72□□□□□ -2.13
HMGCR-213ENST00000515776 NIPBLQ6KC79 2804 aaeCLIP1.72□□□□□ -2.13
HMGCR-213ENST00000515776 SONP18583 2426 aaKnown RBP1.72□□□□□ -2.13
HMGCR-213ENST00000515776 TENM4Q6N022 2769 aa1.72□□□□□ -2.13
HMGCR-213ENST00000515776 FAM208BQ5VWN6 2430 aa1.71□□□□□ -2.14
HMGCR-213ENST00000515776 KRTAP10-10P60014 251 aa1.71□□□□□ -2.14
HMGCR-213ENST00000515776 DYNC2H1Q8NCM8 4307 aaKnown RBP1.71□□□□□ -2.14
HMGCR-213ENST00000515776 DNAH9Q9NYC9 4486 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms