RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 IGLV7-43P04211 117 aa7.45□□□□□ -1.22
SMAD1-215ENST00000515385 PKD1L1Q8TDX9 2849 aa7.44□□□□□ -1.22
SMAD1-215ENST00000515385 SPACA4Q8TDM5 124 aa7.44□□□□□ -1.22
SMAD1-215ENST00000515385 UBE2DNLQ8IWF7 75 aa7.43□□□□□ -1.22
SMAD1-215ENST00000515385 PANO1I0J062 215 aa7.42□□□□□ -1.22
SMAD1-215ENST00000515385 A0A0A0MQY5 61 aa7.42□□□□□ -1.22
SMAD1-215ENST00000515385 IGLV5-52A0A0A0MRZ9 124 aa7.39□□□□□ -1.23
SMAD1-215ENST00000515385 SRRM2Q9UQ35 2752 aaKnown RBP7.37□□□□□ -1.23
SMAD1-215ENST00000515385 KRTAP21-3Q3LHN1 58 aa7.37□□□□□ -1.23
SMAD1-215ENST00000515385 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
SMAD1-215ENST00000515385 PSORS1C2Q9UIG4 136 aa7.37□□□□□ -1.23
SMAD1-215ENST00000515385 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.37□□□□□ -1.23
SMAD1-215ENST00000515385 IGKV2D-30A0A075B6S6 120 aa7.36□□□□□ -1.23
SMAD1-215ENST00000515385 ANAPC11Q9NYG5 84 aa7.36□□□□□ -1.23
SMAD1-215ENST00000515385 TENM3Q9P273 2699 aa7.35□□□□□ -1.23
SMAD1-215ENST00000515385 ANK2Q01484 3957 aa7.34□□□□□ -1.23
SMAD1-215ENST00000515385 TENM1Q9UKZ4 2725 aa7.34□□□□□ -1.23
SMAD1-215ENST00000515385 LY6G6CO95867 125 aa7.34□□□□□ -1.23
SMAD1-215ENST00000515385 P0C880 135 aa7.34□□□□□ -1.23
SMAD1-215ENST00000515385 A8MUU9 505 aa7.33□□□□□ -1.24
SMAD1-215ENST00000515385 CIRBP-AS1Q8TBR5 109 aa7.33□□□□□ -1.24
SMAD1-215ENST00000515385 APLNQ9ULZ1 77 aa7.33□□□□□ -1.24
SMAD1-215ENST00000515385 TRRAPQ9Y4A5 3859 aa7.32□□□□□ -1.24
SMAD1-215ENST00000515385 NBDYA0A0U1RRE5 68 aa7.29□□□□□ -1.24
SMAD1-215ENST00000515385 Q6ZRN7 208 aaPredicted RBP7.29□□□□□ -1.24
SMAD1-215ENST00000515385 KRTAP16-1A8MUX0 517 aa7.28□□□□□ -1.24
SMAD1-215ENST00000515385 ATRQ13535 2644 aa7.26□□□□□ -1.25
SMAD1-215ENST00000515385 NSD1Q96L73 2696 aaPredicted RBP7.26□□□□□ -1.25
SMAD1-215ENST00000515385 LINC00304Q8N9R0 145 aa7.25□□□□□ -1.25
SMAD1-215ENST00000515385 DNAH10Q8IVF4 4471 aa7.25□□□□□ -1.25
SMAD1-215ENST00000515385 DNAH3Q8TD57 4116 aa7.23□□□□□ -1.25
SMAD1-215ENST00000515385 Q6ZSA8 131 aa7.23□□□□□ -1.25
SMAD1-215ENST00000515385 H0YAA0 97 aa7.22□□□□□ -1.25
SMAD1-215ENST00000515385 LYSTQ99698 3801 aa7.2□□□□□ -1.26
SMAD1-215ENST00000515385 A0A087WTM6 91 aa7.2□□□□□ -1.26
SMAD1-215ENST00000515385 SPINK1P00995 79 aa7.19□□□□□ -1.26
SMAD1-215ENST00000515385 A0A1B0GU33 70 aa7.17□□□□□ -1.26
SMAD1-215ENST00000515385 KRTAP24-1Q3LI83 254 aa7.17□□□□□ -1.26
SMAD1-215ENST00000515385 K7ERS5 55 aa7.16□□□□□ -1.26
SMAD1-215ENST00000515385 COL6A5A8TX70 2615 aa7.15□□□□□ -1.26
SMAD1-215ENST00000515385 DNAH9Q9NYC9 4486 aa7.14□□□□□ -1.27
SMAD1-215ENST00000515385 HUWE1Q7Z6Z7 4374 aaKnown RBP7.14□□□□□ -1.27
SMAD1-215ENST00000515385 CMYA5Q8N3K9 4069 aa7.13□□□□□ -1.27
SMAD1-215ENST00000515385 H1FX-AS1Q4G0G2 97 aa7.13□□□□□ -1.27
SMAD1-215ENST00000515385 CSMD3Q7Z407 3707 aa7.12□□□□□ -1.27
SMAD1-215ENST00000515385 FBN1P35555 2871 aaKnown RBP7.12□□□□□ -1.27
SMAD1-215ENST00000515385 C20orf166-AS1Q96NR2 134 aa7.12□□□□□ -1.27
SMAD1-215ENST00000515385 NUPR2A6NF83 97 aa7.12□□□□□ -1.27
SMAD1-215ENST00000515385 Q8N1X5 172 aa7.11□□□□□ -1.27
SMAD1-215ENST00000515385 STAB1Q9NY15 2570 aa7.09□□□□□ -1.27
SMAD1-215ENST00000515385 DNAH8Q96JB1 4490 aa7.08□□□□□ -1.28
SMAD1-215ENST00000515385 FBN3Q75N90 2809 aa7.07□□□□□ -1.28
SMAD1-215ENST00000515385 KRTAP13-2Q52LG2 175 aa7.07□□□□□ -1.28
SMAD1-215ENST00000515385 TYMSOSQ8TAI1 123 aa7.07□□□□□ -1.28
SMAD1-215ENST00000515385 DYNC2H1Q8NCM8 4307 aaKnown RBP7.04□□□□□ -1.28
SMAD1-215ENST00000515385 DNHD1Q96M86 4753 aa7.03□□□□□ -1.28
SMAD1-215ENST00000515385 NDUFAF8A1L188 74 aa7.03□□□□□ -1.28
SMAD1-215ENST00000515385 COL7A1Q02388 2944 aa7.01□□□□□ -1.29
SMAD1-215ENST00000515385 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
SMAD1-215ENST00000515385 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
SMAD1-215ENST00000515385 FRAS1Q86XX4 4008 aa6.98□□□□□ -1.29
SMAD1-215ENST00000515385 NBEAL1Q6ZS30 2694 aa6.96□□□□□ -1.29
SMAD1-215ENST00000515385 CRIPTQ9P021 101 aa6.94□□□□□ -1.3
SMAD1-215ENST00000515385 COX6B2Q6YFQ2 88 aa6.92□□□□□ -1.3
SMAD1-215ENST00000515385 HECTD4Q9Y4D8 3996 aa6.92□□□□□ -1.3
SMAD1-215ENST00000515385 KRTAP3-1Q9BYR8 98 aa6.9□□□□□ -1.3
SMAD1-215ENST00000515385 KRTAP1-4P0C5Y4 121 aa6.89□□□□□ -1.31
SMAD1-215ENST00000515385 RPL37P61927 97 aaKnown RBP6.89□□□□□ -1.31
SMAD1-215ENST00000515385 RPS29P62273 56 aaKnown RBP6.89□□□□□ -1.31
SMAD1-215ENST00000515385 NOTCH1P46531 2555 aa6.89□□□□□ -1.31
SMAD1-215ENST00000515385 DNAH17Q9UFH2 4485 aa6.88□□□□□ -1.31
SMAD1-215ENST00000515385 DNAH7Q8WXX0 4024 aa6.87□□□□□ -1.31
SMAD1-215ENST00000515385 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
SMAD1-215ENST00000515385 MEGF8Q7Z7M0 2845 aa6.84□□□□□ -1.31
SMAD1-215ENST00000515385 LUZP6Q538Z0 58 aa6.84□□□□□ -1.31
SMAD1-215ENST00000515385 PLECQ15149 4684 aaKnown RBP6.84□□□□□ -1.32
SMAD1-215ENST00000515385 STAB2Q8WWQ8 2551 aa6.83□□□□□ -1.32
SMAD1-215ENST00000515385 TGP01266 2768 aa6.82□□□□□ -1.32
SMAD1-215ENST00000515385 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
SMAD1-215ENST00000515385 MGAM2Q2M2H8 2515 aa6.82□□□□□ -1.32
SMAD1-215ENST00000515385 PRKDCP78527 4128 aaKnown RBP6.76□□□□□ -1.33
SMAD1-215ENST00000515385 FLG2Q5D862 2391 aaPredicted RBP6.76□□□□□ -1.33
SMAD1-215ENST00000515385 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
SMAD1-215ENST00000515385 KRTAP10-2P60368 255 aa6.72□□□□□ -1.33
SMAD1-215ENST00000515385 DNAH2Q9P225 4427 aa6.71□□□□□ -1.33
SMAD1-215ENST00000515385 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.34
SMAD1-215ENST00000515385 DNAH11Q96DT5 4516 aa6.68□□□□□ -1.34
SMAD1-215ENST00000515385 C9orf92A6NGG3 77 aa6.67□□□□□ -1.34
SMAD1-215ENST00000515385 KRTAP10-1P60331 282 aa6.67□□□□□ -1.34
SMAD1-215ENST00000515385 A0A0D9SG42 100 aa6.66□□□□□ -1.34
SMAD1-215ENST00000515385 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.34
SMAD1-215ENST00000515385 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
SMAD1-215ENST00000515385 STARD9Q9P2P6 4700 aa6.62□□□□□ -1.35
SMAD1-215ENST00000515385 DNAH6Q9C0G6 4158 aa6.62□□□□□ -1.35
SMAD1-215ENST00000515385 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
SMAD1-215ENST00000515385 S4R3F8 94 aa6.62□□□□□ -1.35
SMAD1-215ENST00000515385 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
SMAD1-215ENST00000515385 KMT2AQ03164 3969 aa6.57□□□□□ -1.36
SMAD1-215ENST00000515385 DNAH5Q8TE73 4624 aa6.56□□□□□ -1.36
SMAD1-215ENST00000515385 XP32Q5T750 250 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms