RNA–Protein interactions for RNA: ENST00000511346.1

AC012055.1-201, humanhuman

TSL 3 BASIC

Gene AC012055.1, Length 1,144 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012055.1-201ENST00000511346 UBR5O95071 2799 aaPredicted RBP1.35□□□□□ -2.19
AC012055.1-201ENST00000511346 LYSTQ99698 3801 aa1.34□□□□□ -2.19
AC012055.1-201ENST00000511346 H3BNG1 76 aa1.34□□□□□ -2.19
AC012055.1-201ENST00000511346 TENM1Q9UKZ4 2725 aa1.34□□□□□ -2.2
AC012055.1-201ENST00000511346 NAV2Q8IVL1 2488 aa1.33□□□□□ -2.2
AC012055.1-201ENST00000511346 CHD7Q9P2D1 2997 aa1.33□□□□□ -2.2
AC012055.1-201ENST00000511346 PRM1P04553 51 aa1.33□□□□□ -2.2
AC012055.1-201ENST00000511346 MAP1BP46821 2468 aaKnown RBP1.32□□□□□ -2.2
AC012055.1-201ENST00000511346 TNXBP22105 4242 aa1.32□□□□□ -2.2
AC012055.1-201ENST00000511346 COL6A5A8TX70 2615 aa1.31□□□□□ -2.2
AC012055.1-201ENST00000511346 DMBT1Q9UGM3 2413 aaPredicted RBP1.31□□□□□ -2.2
AC012055.1-201ENST00000511346 PTPN13Q12923 2485 aa1.31□□□□□ -2.2
AC012055.1-201ENST00000511346 SPART-AS1P0CW21 52 aa1.3□□□□□ -2.2
AC012055.1-201ENST00000511346 HIVEP3Q5T1R4 2406 aa1.29□□□□□ -2.2
AC012055.1-201ENST00000511346 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
AC012055.1-201ENST00000511346 VPS13BQ7Z7G8 4022 aa1.27□□□□□ -2.21
AC012055.1-201ENST00000511346 SETD2Q9BYW2 2564 aaPredicted RBP1.27□□□□□ -2.21
AC012055.1-201ENST00000511346 PKD1L1Q8TDX9 2849 aa1.26□□□□□ -2.21
AC012055.1-201ENST00000511346 NF1P21359 2839 aa1.25□□□□□ -2.21
AC012055.1-201ENST00000511346 KMT2AQ03164 3969 aa1.25□□□□□ -2.21
AC012055.1-201ENST00000511346 ACACAQ13085 2346 aa1.25□□□□□ -2.21
AC012055.1-201ENST00000511346 DNAH11Q96DT5 4516 aa1.25□□□□□ -2.21
AC012055.1-201ENST00000511346 DEFB110Q30KQ9 67 aa1.24□□□□□ -2.21
AC012055.1-201ENST00000511346 RPL39P5Q59GN2 51 aa1.24□□□□□ -2.21
AC012055.1-201ENST00000511346 SACSQ9NZJ4 4579 aa1.24□□□□□ -2.21
AC012055.1-201ENST00000511346 HUWE1Q7Z6Z7 4374 aaKnown RBP1.23□□□□□ -2.21
AC012055.1-201ENST00000511346 SETXQ7Z333 2677 aaKnown RBP1.22□□□□□ -2.21
AC012055.1-201ENST00000511346 PDZD2O15018 2839 aa1.22□□□□□ -2.21
AC012055.1-201ENST00000511346 NOTCH1P46531 2555 aa1.22□□□□□ -2.21
AC012055.1-201ENST00000511346 ZFYVE26Q68DK2 2539 aa1.22□□□□□ -2.21
AC012055.1-201ENST00000511346 FLNCQ14315 2725 aa1.22□□□□□ -2.21
AC012055.1-201ENST00000511346 ACANP16112 2415 aa1.21□□□□□ -2.22
AC012055.1-201ENST00000511346 APC2O95996 2303 aa1.21□□□□□ -2.22
AC012055.1-201ENST00000511346 TENM2Q9NT68 2774 aa1.2□□□□□ -2.22
AC012055.1-201ENST00000511346 USP24Q9UPU5 2620 aa1.19□□□□□ -2.22
AC012055.1-201ENST00000511346 VPS13DQ5THJ4 4388 aa1.19□□□□□ -2.22
AC012055.1-201ENST00000511346 MTORP42345 2549 aa1.19□□□□□ -2.22
AC012055.1-201ENST00000511346 EPG5Q9HCE0 2579 aa1.19□□□□□ -2.22
AC012055.1-201ENST00000511346 GCN1Q92616 2671 aaKnown RBP1.19□□□□□ -2.22
AC012055.1-201ENST00000511346 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
AC012055.1-201ENST00000511346 RIF1Q5UIP0 2472 aaKnown RBP1.18□□□□□ -2.22
AC012055.1-201ENST00000511346 DEFB108AA8MXU0 73 aa1.18□□□□□ -2.22
AC012055.1-201ENST00000511346 MYCBP2O75592 4640 aa1.18□□□□□ -2.22
AC012055.1-201ENST00000511346 CCDC168Q8NDH2 2452 aa1.17□□□□□ -2.22
AC012055.1-201ENST00000511346 H3BUX3 64 aa1.17□□□□□ -2.22
AC012055.1-201ENST00000511346 DNAH3Q8TD57 4116 aa1.16□□□□□ -2.22
AC012055.1-201ENST00000511346 FAM186AA6NE01 2351 aa1.15□□□□□ -2.22
AC012055.1-201ENST00000511346 ZZEF1O43149 2961 aa1.14□□□□□ -2.23
AC012055.1-201ENST00000511346 SPENQ96T58 3664 aaKnown RBP1.14□□□□□ -2.23
AC012055.1-201ENST00000511346 CRYBG3Q68DQ2 2970 aa1.14□□□□□ -2.23
AC012055.1-201ENST00000511346 MACF1Q9UPN3 7388 aaKnown RBP1.13□□□□□ -2.23
AC012055.1-201ENST00000511346 PCLOQ9Y6V0 5065 aa1.13□□□□□ -2.23
AC012055.1-201ENST00000511346 SPRR2DP22532 72 aa1.13□□□□□ -2.23
AC012055.1-201ENST00000511346 RHPN1-AS1Q9BWJ2 59 aa1.13□□□□□ -2.23
AC012055.1-201ENST00000511346 FRYQ5TBA9 3013 aa1.13□□□□□ -2.23
AC012055.1-201ENST00000511346 NSD1Q96L73 2696 aaPredicted RBP1.12□□□□□ -2.23
AC012055.1-201ENST00000511346 DCHS2Q6V1P9 2916 aa1.12□□□□□ -2.23
AC012055.1-201ENST00000511346 SPTBN4Q9H254 2564 aa1.11□□□□□ -2.23
AC012055.1-201ENST00000511346 TACC2O95359 2948 aa1.11□□□□□ -2.23
AC012055.1-201ENST00000511346 STAB1Q9NY15 2570 aa1.11□□□□□ -2.23
AC012055.1-201ENST00000511346 UBR4Q5T4S7 5183 aa1.11□□□□□ -2.23
AC012055.1-201ENST00000511346 DMXL1Q9Y485 3027 aa1.11□□□□□ -2.23
AC012055.1-201ENST00000511346 LRRK2Q5S007 2527 aa1.11□□□□□ -2.23
AC012055.1-201ENST00000511346 COL12A1Q99715 3063 aa1.1□□□□□ -2.23
AC012055.1-201ENST00000511346 UTP20O75691 2785 aaKnown RBP1.1□□□□□ -2.23
AC012055.1-201ENST00000511346 CUBNO60494 3623 aa1.1□□□□□ -2.23
AC012055.1-201ENST00000511346 NBPF19A0A087WUL8 3843 aa1.1□□□□□ -2.23
AC012055.1-201ENST00000511346 KRTAP8-1Q8IUC2 63 aa1.1□□□□□ -2.23
AC012055.1-201ENST00000511346 DYNC2H1Q8NCM8 4307 aaKnown RBP1.1□□□□□ -2.23
AC012055.1-201ENST00000511346 FLNBO75369 2602 aaKnown RBP1.1□□□□□ -2.23
AC012055.1-201ENST00000511346 NCOR2Q9Y618 2525 aa1.09□□□□□ -2.23
AC012055.1-201ENST00000511346 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
AC012055.1-201ENST00000511346 ANK3Q12955 4377 aaKnown RBP1.09□□□□□ -2.23
AC012055.1-201ENST00000511346 ZFHX4Q86UP3 3567 aa1.08□□□□□ -2.24
AC012055.1-201ENST00000511346 PKD1P98161 4303 aa1.08□□□□□ -2.24
AC012055.1-201ENST00000511346 PKHD1L1Q86WI1 4243 aa1.08□□□□□ -2.24
AC012055.1-201ENST00000511346 SPRR2BP35325 72 aa1.08□□□□□ -2.24
AC012055.1-201ENST00000511346 HECTD4Q9Y4D8 3996 aa1.07□□□□□ -2.24
AC012055.1-201ENST00000511346 USP9YO00507 2555 aaPredicted RBP1.07□□□□□ -2.24
AC012055.1-201ENST00000511346 ANKRD11Q6UB99 2663 aaPredicted RBP1.07□□□□□ -2.24
AC012055.1-201ENST00000511346 CACNA1AO00555 2505 aa1.07□□□□□ -2.24
AC012055.1-201ENST00000511346 ANKHD1Q8IWZ3 2542 aaKnown RBP1.06□□□□□ -2.24
AC012055.1-201ENST00000511346 DNAH2Q9P225 4427 aa1.05□□□□□ -2.24
AC012055.1-201ENST00000511346 LPAP08519 4548 aa1.05□□□□□ -2.24
AC012055.1-201ENST00000511346 MGAQ8IWI9 3026 aa1.05□□□□□ -2.24
AC012055.1-201ENST00000511346 SONP18583 2426 aaKnown RBP1.04□□□□□ -2.24
AC012055.1-201ENST00000511346 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
AC012055.1-201ENST00000511346 RANBP2P49792 3224 aaKnown RBP1.04□□□□□ -2.24
AC012055.1-201ENST00000511346 ITPR3Q14573 2671 aa1.04□□□□□ -2.24
AC012055.1-201ENST00000511346 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
AC012055.1-201ENST00000511346 HSPG2P98160 4391 aa1.03□□□□□ -2.24
AC012055.1-201ENST00000511346 NBEAQ8NFP9 2946 aa1.03□□□□□ -2.24
AC012055.1-201ENST00000511346 DNAH8Q96JB1 4490 aa1.03□□□□□ -2.25
AC012055.1-201ENST00000511346 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
AC012055.1-201ENST00000511346 MT1AP04731 61 aa1.02□□□□□ -2.25
AC012055.1-201ENST00000511346 COL7A1Q02388 2944 aa1.02□□□□□ -2.25
AC012055.1-201ENST00000511346 NBEAL2Q6ZNJ1 2754 aa1.02□□□□□ -2.25
AC012055.1-201ENST00000511346 FLGP20930 4061 aaPredicted RBP1.01□□□□□ -2.25
AC012055.1-201ENST00000511346 COL6A3P12111 3177 aa1.01□□□□□ -2.25
AC012055.1-201ENST00000511346 DNAH7Q8WXX0 4024 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms