RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 CUBNO60494 3623 aa3.54□□□□□ -1.84
PDE4D-216ENST00000507116 KRTAP13-3Q3SY46 172 aa3.53□□□□□ -1.84
PDE4D-216ENST00000507116 KRTAP1-3Q8IUG1 177 aa3.53□□□□□ -1.84
PDE4D-216ENST00000507116 PRO0255Q9UI72 69 aa3.53□□□□□ -1.84
PDE4D-216ENST00000507116 PKD1L1Q8TDX9 2849 aa3.53□□□□□ -1.84
PDE4D-216ENST00000507116 Q6YL49 198 aa3.52□□□□□ -1.85
PDE4D-216ENST00000507116 A0A096LPF7 62 aa3.52□□□□□ -1.85
PDE4D-216ENST00000507116 K7EIL1 84 aa3.51□□□□□ -1.85
PDE4D-216ENST00000507116 H3BUX3 64 aa3.51□□□□□ -1.85
PDE4D-216ENST00000507116 KRTAP24-1Q3LI83 254 aa3.51□□□□□ -1.85
PDE4D-216ENST00000507116 A0A1B0GU33 70 aa3.51□□□□□ -1.85
PDE4D-216ENST00000507116 FBN3Q75N90 2809 aa3.5□□□□□ -1.85
PDE4D-216ENST00000507116 AKAP9Q99996 3911 aa3.5□□□□□ -1.85
PDE4D-216ENST00000507116 LCE2DQ5TA82 110 aaPredicted RBP3.5□□□□□ -1.85
PDE4D-216ENST00000507116 DEFB130BP0DP73 79 aa3.49□□□□□ -1.85
PDE4D-216ENST00000507116 DEFB130AP0DP74 79 aa3.49□□□□□ -1.85
PDE4D-216ENST00000507116 FAM229AH3BQW9 127 aa3.49□□□□□ -1.85
PDE4D-216ENST00000507116 KRTAP1-1Q07627 177 aa3.48□□□□□ -1.85
PDE4D-216ENST00000507116 C4orf3Q8WVX3 66 aa3.48□□□□□ -1.85
PDE4D-216ENST00000507116 SLURP1P55000 103 aa3.47□□□□□ -1.85
PDE4D-216ENST00000507116 C10orf99Q6UWK7 81 aa3.47□□□□□ -1.85
PDE4D-216ENST00000507116 SPRR1BP22528 89 aa3.47□□□□□ -1.85
PDE4D-216ENST00000507116 H1FX-AS1Q4G0G2 97 aa3.47□□□□□ -1.85
PDE4D-216ENST00000507116 LELP1Q5T871 98 aa3.47□□□□□ -1.85
PDE4D-216ENST00000507116 GIG44P09565 113 aaPredicted RBP3.46□□□□□ -1.86
PDE4D-216ENST00000507116 NBEAL2Q6ZNJ1 2754 aa3.45□□□□□ -1.86
PDE4D-216ENST00000507116 DNHD1Q96M86 4753 aa3.45□□□□□ -1.86
PDE4D-216ENST00000507116 IGKV2-30P06310 120 aa3.45□□□□□ -1.86
PDE4D-216ENST00000507116 VWFP04275 2813 aa3.45□□□□□ -1.86
PDE4D-216ENST00000507116 IGKV2D-30A0A075B6S6 120 aa3.43□□□□□ -1.86
PDE4D-216ENST00000507116 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
PDE4D-216ENST00000507116 TENM2Q9NT68 2774 aa3.43□□□□□ -1.86
PDE4D-216ENST00000507116 SPINK1P00995 79 aa3.42□□□□□ -1.86
PDE4D-216ENST00000507116 PRLHP81277 87 aa3.42□□□□□ -1.86
PDE4D-216ENST00000507116 TRRAPQ9Y4A5 3859 aa3.41□□□□□ -1.86
PDE4D-216ENST00000507116 KRTAP3-3Q9BYR6 98 aa3.4□□□□□ -1.87
PDE4D-216ENST00000507116 KRTAP3-2Q9BYR7 98 aa3.4□□□□□ -1.87
PDE4D-216ENST00000507116 COX6B2Q6YFQ2 88 aa3.4□□□□□ -1.87
PDE4D-216ENST00000507116 RPL37P61927 97 aaKnown RBP3.39□□□□□ -1.87
PDE4D-216ENST00000507116 STAB2Q8WWQ8 2551 aa3.39□□□□□ -1.87
PDE4D-216ENST00000507116 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
PDE4D-216ENST00000507116 KRTAP21-3Q3LHN1 58 aa3.38□□□□□ -1.87
PDE4D-216ENST00000507116 A0A096LNI7 61 aa3.38□□□□□ -1.87
PDE4D-216ENST00000507116 KRTAP7-1Q8IUC3 87 aa3.38□□□□□ -1.87
PDE4D-216ENST00000507116 C14orf177Q52M58 125 aa3.37□□□□□ -1.87
PDE4D-216ENST00000507116 TYMSOSQ8TAI1 123 aa3.37□□□□□ -1.87
PDE4D-216ENST00000507116 TENM3Q9P273 2699 aa3.37□□□□□ -1.87
PDE4D-216ENST00000507116 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
PDE4D-216ENST00000507116 MEGF8Q7Z7M0 2845 aa3.35□□□□□ -1.87
PDE4D-216ENST00000507116 ANK3Q12955 4377 aaKnown RBP3.34□□□□□ -1.87
PDE4D-216ENST00000507116 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.88
PDE4D-216ENST00000507116 Q8N1X5 172 aa3.32□□□□□ -1.88
PDE4D-216ENST00000507116 WWC2-AS2Q96NR7 200 aa3.32□□□□□ -1.88
PDE4D-216ENST00000507116 KRTAP10-3P60369 221 aa3.32□□□□□ -1.88
PDE4D-216ENST00000507116 SPACA4Q8TDM5 124 aa3.31□□□□□ -1.88
PDE4D-216ENST00000507116 R4GN34 69 aa3.3□□□□□ -1.88
PDE4D-216ENST00000507116 HTN3P15516 51 aa3.28□□□□□ -1.88
PDE4D-216ENST00000507116 SPINK6Q6UWN8 80 aa3.28□□□□□ -1.88
PDE4D-216ENST00000507116 LINC01556Q5JQF7 62 aa3.25□□□□□ -1.89
PDE4D-216ENST00000507116 XP32Q5T750 250 aa3.25□□□□□ -1.89
PDE4D-216ENST00000507116 DEFB4AO15263 64 aa3.25□□□□□ -1.89
PDE4D-216ENST00000507116 SPART-AS1P0CW21 52 aa3.25□□□□□ -1.89
PDE4D-216ENST00000507116 Q6ZRN7 208 aaPredicted RBP3.25□□□□□ -1.89
PDE4D-216ENST00000507116 SRRM2Q9UQ35 2752 aaKnown RBP3.24□□□□□ -1.89
PDE4D-216ENST00000507116 UBE2DNLQ8IWF7 75 aa3.23□□□□□ -1.89
PDE4D-216ENST00000507116 KRTAP10-11P60412 298 aa3.23□□□□□ -1.89
PDE4D-216ENST00000507116 H3BNG1 76 aa3.22□□□□□ -1.89
PDE4D-216ENST00000507116 APLNQ9ULZ1 77 aa3.22□□□□□ -1.89
PDE4D-216ENST00000507116 COL7A1Q02388 2944 aa3.22□□□□□ -1.89
PDE4D-216ENST00000507116 A0A0D9SG42 100 aa3.21□□□□□ -1.9
PDE4D-216ENST00000507116 S4R3F8 94 aa3.21□□□□□ -1.9
PDE4D-216ENST00000507116 INE1O15225 51 aa3.2□□□□□ -1.9
PDE4D-216ENST00000507116 KRTAP13-1Q8IUC0 172 aa3.2□□□□□ -1.9
PDE4D-216ENST00000507116 DEFB135Q30KP9 77 aa3.18□□□□□ -1.9
PDE4D-216ENST00000507116 ANK2Q01484 3957 aa3.17□□□□□ -1.9
PDE4D-216ENST00000507116 PRKDCP78527 4128 aaKnown RBP3.16□□□□□ -1.9
PDE4D-216ENST00000507116 DMBT1Q9UGM3 2413 aaPredicted RBP3.15□□□□□ -1.91
PDE4D-216ENST00000507116 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
PDE4D-216ENST00000507116 KRTAP10-8P60410 259 aa3.12□□□□□ -1.91
PDE4D-216ENST00000507116 KRTAP12-2P59991 146 aa3.11□□□□□ -1.91
PDE4D-216ENST00000507116 KRTAP10-6P60371 365 aaPredicted RBP3.1□□□□□ -1.91
PDE4D-216ENST00000507116 CSMD3Q7Z407 3707 aa3.08□□□□□ -1.92
PDE4D-216ENST00000507116 KRTAP3-1Q9BYR8 98 aa3.08□□□□□ -1.92
PDE4D-216ENST00000507116 KRTAP12-1P59990 96 aa3.06□□□□□ -1.92
PDE4D-216ENST00000507116 CMYA5Q8N3K9 4069 aa3.06□□□□□ -1.92
PDE4D-216ENST00000507116 KMT2CQ8NEZ4 4911 aaKnown RBP3.05□□□□□ -1.92
PDE4D-216ENST00000507116 PP632Q6XCG6 107 aa3.03□□□□□ -1.93
PDE4D-216ENST00000507116 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
PDE4D-216ENST00000507116 DNAH9Q9NYC9 4486 aa2.97□□□□□ -1.93
PDE4D-216ENST00000507116 RYR3Q15413 4870 aa2.96□□□□□ -1.94
PDE4D-216ENST00000507116 HYDINQ4G0P3 5121 aa2.96□□□□□ -1.94
PDE4D-216ENST00000507116 HUWE1Q7Z6Z7 4374 aaKnown RBP2.94□□□□□ -1.94
PDE4D-216ENST00000507116 M0QZ58 72 aa2.94□□□□□ -1.94
PDE4D-216ENST00000507116 DNAH3Q8TD57 4116 aa2.93□□□□□ -1.94
PDE4D-216ENST00000507116 FRAS1Q86XX4 4008 aa2.92□□□□□ -1.94
PDE4D-216ENST00000507116 STARD9Q9P2P6 4700 aa2.92□□□□□ -1.94
PDE4D-216ENST00000507116 SMR3BP02814 79 aaPredicted RBP2.91□□□□□ -1.94
PDE4D-216ENST00000507116 EPPK1P58107 5090 aaKnown RBP2.91□□□□□ -1.94
PDE4D-216ENST00000507116 DNAH1Q9P2D7 4330 aa2.89□□□□□ -1.95
PDE4D-216ENST00000507116 KIAA1109Q2LD37 5005 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms