RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 WWC2-AS2Q96NR7 200 aa9.55□□□□□ -0.88
SCLT1-208ENST00000506368 LINC00313P59037 77 aa9.55□□□□□ -0.88
SCLT1-208ENST00000506368 DYNC2H1Q8NCM8 4307 aaKnown RBP9.55□□□□□ -0.88
SCLT1-208ENST00000506368 C8orf87E5RJ46 101 aa9.54□□□□□ -0.88
SCLT1-208ENST00000506368 CHTF8P0CG12 524 aa9.51□□□□□ -0.89
SCLT1-208ENST00000506368 IGLV9-49A0A0B4J1Y8 123 aa9.51□□□□□ -0.89
SCLT1-208ENST00000506368 PRR26Q8N8Z3 221 aa9.5□□□□□ -0.89
SCLT1-208ENST00000506368 KRTAP13-3Q3SY46 172 aa9.49□□□□□ -0.89
SCLT1-208ENST00000506368 DMAC1Q96GE9 116 aa9.49□□□□□ -0.89
SCLT1-208ENST00000506368 SPATA8Q6RVD6 105 aa9.49□□□□□ -0.89
SCLT1-208ENST00000506368 KRTAP1-5Q9BYS1 174 aa9.46□□□□□ -0.89
SCLT1-208ENST00000506368 A0A1B0GU69 56 aa9.46□□□□□ -0.9
SCLT1-208ENST00000506368 LINC01554Q52M75 96 aa9.44□□□□□ -0.9
SCLT1-208ENST00000506368 NUPR2A6NF83 97 aa9.43□□□□□ -0.9
SCLT1-208ENST00000506368 RTL8CO15255 209 aa9.43□□□□□ -0.9
SCLT1-208ENST00000506368 C4orf48Q5BLP8 95 aa9.41□□□□□ -0.9
SCLT1-208ENST00000506368 APLNQ9ULZ1 77 aa9.4□□□□□ -0.9
SCLT1-208ENST00000506368 UQCR11O14957 56 aa9.4□□□□□ -0.91
SCLT1-208ENST00000506368 Q5W150 140 aa9.4□□□□□ -0.91
SCLT1-208ENST00000506368 UBE2DNLQ8IWF7 75 aa9.4□□□□□ -0.91
SCLT1-208ENST00000506368 KMT2CQ8NEZ4 4911 aaKnown RBP9.39□□□□□ -0.91
SCLT1-208ENST00000506368 VPS13DQ5THJ4 4388 aa9.39□□□□□ -0.91
SCLT1-208ENST00000506368 HYDINQ4G0P3 5121 aa9.38□□□□□ -0.91
SCLT1-208ENST00000506368 NOTCH2NLQ7Z3S9 236 aa9.38□□□□□ -0.91
SCLT1-208ENST00000506368 SACSQ9NZJ4 4579 aa9.38□□□□□ -0.91
SCLT1-208ENST00000506368 FAM229AH3BQW9 127 aa9.37□□□□□ -0.91
SCLT1-208ENST00000506368 SPACA4Q8TDM5 124 aa9.37□□□□□ -0.91
SCLT1-208ENST00000506368 PRAC1Q96KF2 57 aa9.37□□□□□ -0.91
SCLT1-208ENST00000506368 KMT2AQ03164 3969 aa9.37□□□□□ -0.91
SCLT1-208ENST00000506368 MIR22HGQ0VDD5 57 aa9.36□□□□□ -0.91
SCLT1-208ENST00000506368 RETNLBQ9BQ08 111 aa9.33□□□□□ -0.92
SCLT1-208ENST00000506368 ALMS1Q8TCU4 4167 aa9.32□□□□□ -0.92
SCLT1-208ENST00000506368 ZNF861PO60384 105 aa9.31□□□□□ -0.92
SCLT1-208ENST00000506368 LY6G6CO95867 125 aa9.3□□□□□ -0.92
SCLT1-208ENST00000506368 IGLV5-52A0A0A0MRZ9 124 aa9.3□□□□□ -0.92
SCLT1-208ENST00000506368 PANO1I0J062 215 aa9.3□□□□□ -0.92
SCLT1-208ENST00000506368 IGKV2-30P06310 120 aa9.28□□□□□ -0.92
SCLT1-208ENST00000506368 ADM2Q7Z4H4 148 aa9.27□□□□□ -0.93
SCLT1-208ENST00000506368 NBDYA0A0U1RRE5 68 aa9.25□□□□□ -0.93
SCLT1-208ENST00000506368 SPINK6Q6UWN8 80 aa9.25□□□□□ -0.93
SCLT1-208ENST00000506368 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.25□□□□□ -0.93
SCLT1-208ENST00000506368 RYR3Q15413 4870 aa9.25□□□□□ -0.93
SCLT1-208ENST00000506368 SSBP3-AS1Q7Z2R9 100 aa9.24□□□□□ -0.93
SCLT1-208ENST00000506368 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
SCLT1-208ENST00000506368 DNAH2Q9P225 4427 aa9.24□□□□□ -0.93
SCLT1-208ENST00000506368 DNAH10Q8IVF4 4471 aa9.24□□□□□ -0.93
SCLT1-208ENST00000506368 Q6ZRN7 208 aaPredicted RBP9.24□□□□□ -0.93
SCLT1-208ENST00000506368 RYR2Q92736 4967 aa9.23□□□□□ -0.93
SCLT1-208ENST00000506368 DNAH6Q9C0G6 4158 aa9.19□□□□□ -0.94
SCLT1-208ENST00000506368 FRAS1Q86XX4 4008 aa9.16□□□□□ -0.94
SCLT1-208ENST00000506368 SRRM2Q9UQ35 2752 aaKnown RBP9.15□□□□□ -0.94
SCLT1-208ENST00000506368 IGLV7-43P04211 117 aa9.15□□□□□ -0.94
SCLT1-208ENST00000506368 CIRBP-AS1Q8TBR5 109 aa9.14□□□□□ -0.95
SCLT1-208ENST00000506368 ANAPC11Q9NYG5 84 aa9.14□□□□□ -0.95
SCLT1-208ENST00000506368 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
SCLT1-208ENST00000506368 IGKV2D-30A0A075B6S6 120 aa9.11□□□□□ -0.95
SCLT1-208ENST00000506368 A0A087WTM6 91 aa9.11□□□□□ -0.95
SCLT1-208ENST00000506368 H3BS24 57 aa9.1□□□□□ -0.95
SCLT1-208ENST00000506368 DNAH17Q9UFH2 4485 aa9.09□□□□□ -0.95
SCLT1-208ENST00000506368 FAT2Q9NYQ8 4349 aa9.09□□□□□ -0.95
SCLT1-208ENST00000506368 KRTAP16-1A8MUX0 517 aa9.06□□□□□ -0.96
SCLT1-208ENST00000506368 C1orf134Q5TEV5 83 aa9.03□□□□□ -0.96
SCLT1-208ENST00000506368 PKD1P98161 4303 aa9.01□□□□□ -0.97
SCLT1-208ENST00000506368 DNAH11Q96DT5 4516 aa9□□□□□ -0.97
SCLT1-208ENST00000506368 DNAH8Q96JB1 4490 aa8.97□□□□□ -0.97
SCLT1-208ENST00000506368 PKHD1P08F94 4074 aa8.96□□□□□ -0.98
SCLT1-208ENST00000506368 A8MUU9 505 aa8.95□□□□□ -0.98
SCLT1-208ENST00000506368 EPPK1P58107 5090 aaKnown RBP8.93□□□□□ -0.98
SCLT1-208ENST00000506368 KRTAP25-1Q3LHN0 102 aa8.93□□□□□ -0.98
SCLT1-208ENST00000506368 HECTD4Q9Y4D8 3996 aa8.92□□□□□ -0.98
SCLT1-208ENST00000506368 DNAH5Q8TE73 4624 aa8.9□□□□□ -0.98
SCLT1-208ENST00000506368 KRTAP10-2P60368 255 aa8.87□□□□□ -0.99
SCLT1-208ENST00000506368 A0A1B0GVY2 172 aa8.85□□□□□ -0.99
SCLT1-208ENST00000506368 Q6ZSA8 131 aa8.85□□□□□ -0.99
SCLT1-208ENST00000506368 H0YAA0 97 aa8.85□□□□□ -0.99
SCLT1-208ENST00000506368 KRTAP13-2Q52LG2 175 aa8.84□□□□□ -0.99
SCLT1-208ENST00000506368 LINC00304Q8N9R0 145 aa8.84□□□□□ -0.99
SCLT1-208ENST00000506368 SPINK1P00995 79 aa8.83□□□□□ -1
SCLT1-208ENST00000506368 ROMO1P60602 79 aa8.83□□□□□ -1
SCLT1-208ENST00000506368 DYNC1H1Q14204 4646 aaKnown RBP8.81□□□□□ -1
SCLT1-208ENST00000506368 A0A1B0GU33 70 aa8.81□□□□□ -1
SCLT1-208ENST00000506368 LRP1BQ9NZR2 4599 aa8.8□□□□□ -1
SCLT1-208ENST00000506368 K7ERS5 55 aa8.79□□□□□ -1
SCLT1-208ENST00000506368 H1FX-AS1Q4G0G2 97 aa8.76□□□□□ -1.01
SCLT1-208ENST00000506368 Q8N1X5 172 aa8.76□□□□□ -1.01
SCLT1-208ENST00000506368 KRTAP10-1P60331 282 aa8.73□□□□□ -1.01
SCLT1-208ENST00000506368 RPS29P62273 56 aaKnown RBP8.73□□□□□ -1.01
SCLT1-208ENST00000506368 APOBP04114 4563 aaKnown RBP8.71□□□□□ -1.02
SCLT1-208ENST00000506368 KRTAP1-4P0C5Y4 121 aa8.69□□□□□ -1.02
SCLT1-208ENST00000506368 TYMSOSQ8TAI1 123 aa8.68□□□□□ -1.02
SCLT1-208ENST00000506368 KIAA1109Q2LD37 5005 aa8.68□□□□□ -1.02
SCLT1-208ENST00000506368 HSPG2P98160 4391 aa8.63□□□□□ -1.03
SCLT1-208ENST00000506368 BIRC6Q9NR09 4857 aa8.63□□□□□ -1.03
SCLT1-208ENST00000506368 FAT1Q14517 4588 aa8.59□□□□□ -1.03
SCLT1-208ENST00000506368 C20orf166-AS1Q96NR2 134 aa8.58□□□□□ -1.04
SCLT1-208ENST00000506368 RYR1P21817 5038 aa8.58□□□□□ -1.04
SCLT1-208ENST00000506368 KRTAP17-1Q9BYP8 105 aa8.56□□□□□ -1.04
SCLT1-208ENST00000506368 SMR3BP02814 79 aaPredicted RBP8.54□□□□□ -1.04
SCLT1-208ENST00000506368 KRTAP3-1Q9BYR8 98 aa8.54□□□□□ -1.04
SCLT1-208ENST00000506368 COX6B2Q6YFQ2 88 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms