RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 MYO5CQ9NQX4 1742 aa-0.63□□□□□ -2.51
CHD1-203ENST00000505657 USP9YO00507 2555 aaPredicted RBP-0.63□□□□□ -2.51
CHD1-203ENST00000505657 UTP20O75691 2785 aaKnown RBP-0.63□□□□□ -2.51
CHD1-203ENST00000505657 DNAH2Q9P225 4427 aa-0.63□□□□□ -2.51
CHD1-203ENST00000505657 ABCA8O94911 1581 aa-0.63□□□□□ -2.51
CHD1-203ENST00000505657 HFM1A2PYH4 1435 aa-0.64□□□□□ -2.51
CHD1-203ENST00000505657 NBEAL2Q6ZNJ1 2754 aa-0.64□□□□□ -2.51
CHD1-203ENST00000505657 NHSQ6T4R5 1651 aa-0.64□□□□□ -2.51
CHD1-203ENST00000505657 DEFB131BA0A096LNP1 70 aa-0.64□□□□□ -2.51
CHD1-203ENST00000505657 LMTK2Q8IWU2 1503 aa-0.64□□□□□ -2.51
CHD1-203ENST00000505657 RYR2Q92736 4967 aa-0.65□□□□□ -2.51
CHD1-203ENST00000505657 RALGAPBQ86X10 1494 aa-0.65□□□□□ -2.51
CHD1-203ENST00000505657 CD163L1Q9NR16 1453 aa-0.65□□□□□ -2.51
CHD1-203ENST00000505657 DEFB106AQ8N104 65 aa-0.65□□□□□ -2.51
CHD1-203ENST00000505657 C18orf32Q8TCD1 76 aa-0.65□□□□□ -2.51
CHD1-203ENST00000505657 KIAA0586Q9BVV6 1533 aa-0.65□□□□□ -2.51
CHD1-203ENST00000505657 ITSN2Q9NZM3 1697 aa-0.65□□□□□ -2.51
CHD1-203ENST00000505657 A0A0C4DFX4 3053 aa-0.66□□□□□ -2.51
CHD1-203ENST00000505657 MRPL33O75394 65 aaKnown RBP-0.66□□□□□ -2.52
CHD1-203ENST00000505657 UBL5Q9BZL1 73 aa-0.66□□□□□ -2.52
CHD1-203ENST00000505657 H3BVH4 76 aa-0.67□□□□□ -2.52
CHD1-203ENST00000505657 S4R3F8 94 aa-0.67□□□□□ -2.52
CHD1-203ENST00000505657 RRBP1Q9P2E9 1410 aaKnown RBP-0.67□□□□□ -2.52
CHD1-203ENST00000505657 WDR87Q6ZQQ6 2873 aa-0.67□□□□□ -2.52
CHD1-203ENST00000505657 IQGAP3Q86VI3 1631 aa-0.67□□□□□ -2.52
CHD1-203ENST00000505657 RELNP78509 3460 aa-0.68□□□□□ -2.52
CHD1-203ENST00000505657 KCNQ1DNQ9H478 68 aa-0.68□□□□□ -2.52
CHD1-203ENST00000505657 CMYA5Q8N3K9 4069 aa-0.68□□□□□ -2.52
CHD1-203ENST00000505657 DNAH8Q96JB1 4490 aa-0.68□□□□□ -2.52
CHD1-203ENST00000505657 ABCA13Q86UQ4 5058 aa-0.69□□□□□ -2.52
CHD1-203ENST00000505657 CRIP1P50238 77 aa-0.69□□□□□ -2.52
CHD1-203ENST00000505657 ENHOQ6UWT2 76 aa-0.69□□□□□ -2.52
CHD1-203ENST00000505657 DNHD1Q96M86 4753 aa-0.69□□□□□ -2.52
CHD1-203ENST00000505657 MGAM2Q2M2H8 2515 aa-0.69□□□□□ -2.52
CHD1-203ENST00000505657 KIF1AQ12756 1690 aa-0.69□□□□□ -2.52
CHD1-203ENST00000505657 ACACBO00763 2458 aa-0.7□□□□□ -2.52
CHD1-203ENST00000505657 DNAH7Q8WXX0 4024 aa-0.7□□□□□ -2.52
CHD1-203ENST00000505657 SPENQ96T58 3664 aaKnown RBP-0.7□□□□□ -2.52
CHD1-203ENST00000505657 ANKARQ7Z5J8 1434 aa-0.7□□□□□ -2.52
CHD1-203ENST00000505657 PLECQ15149 4684 aaKnown RBP-0.7□□□□□ -2.52
CHD1-203ENST00000505657 BIRC6Q9NR09 4857 aa-0.7□□□□□ -2.52
CHD1-203ENST00000505657 TOGARAM1Q9Y4F4 1720 aa-0.7□□□□□ -2.52
CHD1-203ENST00000505657 INO80Q9ULG1 1556 aaPredicted RBP-0.7□□□□□ -2.52
CHD1-203ENST00000505657 SPTBN5Q9NRC6 3674 aaKnown RBP-0.72□□□□□ -2.52
CHD1-203ENST00000505657 DEFB110Q30KQ9 67 aa-0.73□□□□□ -2.53
CHD1-203ENST00000505657 DIP2AQ14689 1571 aa-0.74□□□□□ -2.53
CHD1-203ENST00000505657 CDC42BPGQ6DT37 1551 aa-0.74□□□□□ -2.53
CHD1-203ENST00000505657 C3P01024 1663 aa-0.74□□□□□ -2.53
CHD1-203ENST00000505657 ETDCA0A1B0GVM5 59 aa-0.75□□□□□ -2.53
CHD1-203ENST00000505657 RANBP2P49792 3224 aaKnown RBP-0.75□□□□□ -2.53
CHD1-203ENST00000505657 TRIOO75962 3097 aa-0.75□□□□□ -2.53
CHD1-203ENST00000505657 MINOS1Q5TGZ0 78 aa-0.76□□□□□ -2.53
CHD1-203ENST00000505657 ABCA9Q8IUA7 1624 aa-0.76□□□□□ -2.53
CHD1-203ENST00000505657 LAMA3Q16787 3333 aa-0.76□□□□□ -2.53
CHD1-203ENST00000505657 MROH1Q8NDA8 1641 aa-0.77□□□□□ -2.53
CHD1-203ENST00000505657 UGGT2Q9NYU1 1516 aa-0.77□□□□□ -2.53
CHD1-203ENST00000505657 WT1-ASQ06250 92 aa-0.77□□□□□ -2.53
CHD1-203ENST00000505657 HILPDAQ9Y5L2 63 aa-0.77□□□□□ -2.53
CHD1-203ENST00000505657 LY75O60449 1722 aa-0.78□□□□□ -2.53
CHD1-203ENST00000505657 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.78□□□□□ -2.53
CHD1-203ENST00000505657 RPS27P42677 84 aaKnown RBP-0.78□□□□□ -2.53
CHD1-203ENST00000505657 RPS27LQ71UM5 84 aaKnown RBP-0.78□□□□□ -2.53
CHD1-203ENST00000505657 RIF1Q5UIP0 2472 aaKnown RBP-0.78□□□□□ -2.53
CHD1-203ENST00000505657 LAMA2P24043 3122 aaKnown RBP-0.78□□□□□ -2.53
CHD1-203ENST00000505657 DYNC1H1Q14204 4646 aaKnown RBP-0.79□□□□□ -2.54
CHD1-203ENST00000505657 TLN2Q9Y4G6 2542 aa-0.79□□□□□ -2.54
CHD1-203ENST00000505657 ATXN8Q156A1 80 aa-0.8□□□□□ -2.54
CHD1-203ENST00000505657 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.8□□□□□ -2.54
CHD1-203ENST00000505657 ABCC6O95255 1503 aa-0.81□□□□□ -2.54
CHD1-203ENST00000505657 SCRIBQ14160 1630 aa-0.82□□□□□ -2.54
CHD1-203ENST00000505657 KRTAP20-1Q3LI63 56 aa-0.82□□□□□ -2.54
CHD1-203ENST00000505657 NCBP2-AS2Q69YL0 99 aa-0.82□□□□□ -2.54
CHD1-203ENST00000505657 GNG13Q9P2W3 67 aa-0.82□□□□□ -2.54
CHD1-203ENST00000505657 CELSR3Q9NYQ7 3312 aa-0.82□□□□□ -2.54
CHD1-203ENST00000505657 TEX15Q9BXT5 2789 aa-0.82□□□□□ -2.54
CHD1-203ENST00000505657 SFTA3P0C7M3 94 aa-0.83□□□□□ -2.54
CHD1-203ENST00000505657 FCER1GP30273 86 aa-0.83□□□□□ -2.54
CHD1-203ENST00000505657 MT1HP80294 61 aa-0.83□□□□□ -2.54
CHD1-203ENST00000505657 C6orf48Q9UBA6 75 aa-0.83□□□□□ -2.54
CHD1-203ENST00000505657 DNMBPQ6XZF7 1577 aa-0.83□□□□□ -2.54
CHD1-203ENST00000505657 CDC42BPAQ5VT25 1732 aa-0.84□□□□□ -2.54
CHD1-203ENST00000505657 COL6A5A8TX70 2615 aa-0.84□□□□□ -2.54
CHD1-203ENST00000505657 ASXL1Q8IXJ9 1541 aa-0.84□□□□□ -2.54
CHD1-203ENST00000505657 USP9XQ93008 2570 aaPredicted RBP-0.84□□□□□ -2.54
CHD1-203ENST00000505657 MADDQ8WXG6 1647 aa-0.84□□□□□ -2.54
CHD1-203ENST00000505657 KRTAP19-5Q3LI72 72 aa-0.84□□□□□ -2.54
CHD1-203ENST00000505657 DUOX2Q9NRD8 1548 aa-0.84□□□□□ -2.54
CHD1-203ENST00000505657 A0A1B0GUL6 1792 aa-0.85□□□□□ -2.55
CHD1-203ENST00000505657 DEFB114Q30KQ6 69 aa-0.85□□□□□ -2.55
CHD1-203ENST00000505657 COL12A1Q99715 3063 aa-0.85□□□□□ -2.55
CHD1-203ENST00000505657 DNAH17Q9UFH2 4485 aa-0.85□□□□□ -2.55
CHD1-203ENST00000505657 FRYQ5TBA9 3013 aa-0.86□□□□□ -2.55
CHD1-203ENST00000505657 IGLV5-48A0A075B6I7 105 aa-0.86□□□□□ -2.55
CHD1-203ENST00000505657 C5orf42Q9H799 3197 aa-0.87□□□□□ -2.55
CHD1-203ENST00000505657 CROCC2H7BZ55 1655 aa-0.87□□□□□ -2.55
CHD1-203ENST00000505657 SMCO4Q9NRQ5 59 aa-0.87□□□□□ -2.55
CHD1-203ENST00000505657 NIPBLQ6KC79 2804 aaeCLIP-0.88□□□□□ -2.553e-6■□□□□ 9.5
CHD1-203ENST00000505657 H3BUA1 57 aa-0.89□□□□□ -2.55
CHD1-203ENST00000505657 MMP24-AS1A0A0U1RRL7 71 aa-0.9□□□□□ -2.55
CHD1-203ENST00000505657 PDCD5O14737 125 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms