RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 IGKV2-24A0A0C4DH68 120 aa2.28□□□□□ -2.04
PDLIM1P4-201ENST00000504327 hADV29S1A0JD25 119 aa2.28□□□□□ -2.04
PDLIM1P4-201ENST00000504327 H3BRM9 83 aa2.28□□□□□ -2.04
PDLIM1P4-201ENST00000504327 HTN3P15516 51 aa2.28□□□□□ -2.04
PDLIM1P4-201ENST00000504327 CCL18P55774 89 aa2.28□□□□□ -2.04
PDLIM1P4-201ENST00000504327 KRTAP13-2Q52LG2 175 aa2.28□□□□□ -2.04
PDLIM1P4-201ENST00000504327 LYPD5Q6UWN5 251 aa2.28□□□□□ -2.04
PDLIM1P4-201ENST00000504327 TRBV7-7A0A0K0K1E9 115 aa2.27□□□□□ -2.05
PDLIM1P4-201ENST00000504327 HCG22E2RYF7 251 aa2.27□□□□□ -2.05
PDLIM1P4-201ENST00000504327 LY6G6CO95867 125 aa2.27□□□□□ -2.05
PDLIM1P4-201ENST00000504327 LELP1Q5T871 98 aa2.27□□□□□ -2.05
PDLIM1P4-201ENST00000504327 SFTA2Q6UW10 78 aa2.27□□□□□ -2.05
PDLIM1P4-201ENST00000504327 IFI27L1Q96BM0 104 aa2.27□□□□□ -2.05
PDLIM1P4-201ENST00000504327 RPL39LQ96EH5 51 aaKnown RBP2.27□□□□□ -2.05
PDLIM1P4-201ENST00000504327 DMAC1Q96GE9 116 aa2.27□□□□□ -2.05
PDLIM1P4-201ENST00000504327 PKD1P98161 4303 aa2.26□□□□□ -2.05
PDLIM1P4-201ENST00000504327 A0A096LPF7 62 aa2.26□□□□□ -2.05
PDLIM1P4-201ENST00000504327 A0A0J9YY99 117 aa2.26□□□□□ -2.05
PDLIM1P4-201ENST00000504327 IGIPA6NJ69 53 aa2.26□□□□□ -2.05
PDLIM1P4-201ENST00000504327 SYS1-DBNDD2H3BUS1 97 aa2.26□□□□□ -2.05
PDLIM1P4-201ENST00000504327 TPRXLQ17RH7 258 aa2.26□□□□□ -2.05
PDLIM1P4-201ENST00000504327 CDC42SE1Q9NRR8 79 aa2.26□□□□□ -2.05
PDLIM1P4-201ENST00000504327 PKHD1P08F94 4074 aa2.25□□□□□ -2.05
PDLIM1P4-201ENST00000504327 DNAH5Q8TE73 4624 aa2.25□□□□□ -2.05
PDLIM1P4-201ENST00000504327 A0A1W2PNN7 141 aa2.25□□□□□ -2.05
PDLIM1P4-201ENST00000504327 F8VRH5 84 aa2.25□□□□□ -2.05
PDLIM1P4-201ENST00000504327 NDUFC1O43677 76 aa2.25□□□□□ -2.05
PDLIM1P4-201ENST00000504327 LINC01556Q5JQF7 62 aa2.25□□□□□ -2.05
PDLIM1P4-201ENST00000504327 CSAG1Q6PB30 78 aa2.25□□□□□ -2.05
PDLIM1P4-201ENST00000504327 CDC42SE2Q9NRR3 84 aa2.25□□□□□ -2.05
PDLIM1P4-201ENST00000504327 LINC00474Q9P2X8 69 aa2.25□□□□□ -2.05
PDLIM1P4-201ENST00000504327 UBE2D4Q9Y2X8 147 aa2.25□□□□□ -2.05
PDLIM1P4-201ENST00000504327 HECTD4Q9Y4D8 3996 aa2.25□□□□□ -2.05
PDLIM1P4-201ENST00000504327 LRP1BQ9NZR2 4599 aa2.24□□□□□ -2.05
PDLIM1P4-201ENST00000504327 TRAV23DV6A0A075B6W5 121 aa2.24□□□□□ -2.05
PDLIM1P4-201ENST00000504327 C3orf79P0CE67 100 aa2.24□□□□□ -2.05
PDLIM1P4-201ENST00000504327 PP632Q6XCG6 107 aa2.24□□□□□ -2.05
PDLIM1P4-201ENST00000504327 SPACA4Q8TDM5 124 aa2.24□□□□□ -2.05
PDLIM1P4-201ENST00000504327 AMELXQ99217 191 aa2.24□□□□□ -2.05
PDLIM1P4-201ENST00000504327 UQCR10Q9UDW1 63 aa2.24□□□□□ -2.05
PDLIM1P4-201ENST00000504327 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.23□□□□□ -2.05
PDLIM1P4-201ENST00000504327 IGKV2-29A2NJV5 120 aaPredicted RBP2.23□□□□□ -2.05
PDLIM1P4-201ENST00000504327 M0R2N4 97 aa2.23□□□□□ -2.05
PDLIM1P4-201ENST00000504327 NUPR1O60356 82 aa2.23□□□□□ -2.05
PDLIM1P4-201ENST00000504327 ANGP03950 147 aaKnown RBP2.23□□□□□ -2.05
PDLIM1P4-201ENST00000504327 IGLC3P0DOY3 106 aa2.23□□□□□ -2.05
PDLIM1P4-201ENST00000504327 UBE2D1P51668 147 aa2.23□□□□□ -2.05
PDLIM1P4-201ENST00000504327 RPL39P62891 51 aaKnown RBP2.23□□□□□ -2.05
PDLIM1P4-201ENST00000504327 IGFL1Q6UW32 110 aa2.23□□□□□ -2.05
PDLIM1P4-201ENST00000504327 UBE2DNLQ8IWF7 75 aa2.23□□□□□ -2.05
PDLIM1P4-201ENST00000504327 SERP2Q8N6R1 65 aa2.23□□□□□ -2.05
PDLIM1P4-201ENST00000504327 APOBP04114 4563 aaKnown RBP2.23□□□□□ -2.05
PDLIM1P4-201ENST00000504327 NBDYA0A0U1RRE5 68 aa2.22□□□□□ -2.05
PDLIM1P4-201ENST00000504327 LINC00959A0A1B0GUT2 108 aa2.22□□□□□ -2.05
PDLIM1P4-201ENST00000504327 IGHV3-30P01768 117 aa2.22□□□□□ -2.05
PDLIM1P4-201ENST00000504327 IGHV3-30-5P0DP03 117 aa2.22□□□□□ -2.05
PDLIM1P4-201ENST00000504327 TMEM170BQ5T4T1 132 aa2.22□□□□□ -2.05
PDLIM1P4-201ENST00000504327 MYMXA0A1B0GTQ4 84 aa2.21□□□□□ -2.06
PDLIM1P4-201ENST00000504327 FAT1Q14517 4588 aa2.21□□□□□ -2.06
PDLIM1P4-201ENST00000504327 Q6ZRN7 208 aaPredicted RBP2.21□□□□□ -2.06
PDLIM1P4-201ENST00000504327 WFDC10BQ8IUB3 73 aa2.21□□□□□ -2.06
PDLIM1P4-201ENST00000504327 JMJD7-PLA2G4BH0Y9G9 81 aa2.2□□□□□ -2.06
PDLIM1P4-201ENST00000504327 COX8AP10176 69 aa2.2□□□□□ -2.06
PDLIM1P4-201ENST00000504327 COX17Q14061 63 aa2.2□□□□□ -2.06
PDLIM1P4-201ENST00000504327 SPATA45Q537H7 98 aa2.2□□□□□ -2.06
PDLIM1P4-201ENST00000504327 Q8IZM0 81 aa2.2□□□□□ -2.06
PDLIM1P4-201ENST00000504327 LIMD2Q9BT23 127 aa2.2□□□□□ -2.06
PDLIM1P4-201ENST00000504327 CDKN2A-AS1Q9UH64 79 aa2.2□□□□□ -2.06
PDLIM1P4-201ENST00000504327 FAT4Q6V0I7 4981 aa2.19□□□□□ -2.06
PDLIM1P4-201ENST00000504327 DNAH8Q96JB1 4490 aa2.19□□□□□ -2.06
PDLIM1P4-201ENST00000504327 NDUFA1O15239 70 aa2.19□□□□□ -2.06
PDLIM1P4-201ENST00000504327 PDE6GP18545 87 aa2.19□□□□□ -2.06
PDLIM1P4-201ENST00000504327 ENHOQ6UWT2 76 aa2.19□□□□□ -2.06
PDLIM1P4-201ENST00000504327 HIGD1BQ9P298 99 aa2.19□□□□□ -2.06
PDLIM1P4-201ENST00000504327 HSPG2P98160 4391 aa2.19□□□□□ -2.06
PDLIM1P4-201ENST00000504327 GVQW2A0A096LPI5 108 aaPredicted RBP2.18□□□□□ -2.06
PDLIM1P4-201ENST00000504327 IGKV3OR2-268A0A0C4DH90 116 aa2.18□□□□□ -2.06
PDLIM1P4-201ENST00000504327 TRBV30A0A0K0K1B3 111 aa2.18□□□□□ -2.06
PDLIM1P4-201ENST00000504327 ZNF815PA8K554 130 aa2.18□□□□□ -2.06
PDLIM1P4-201ENST00000504327 COX7B2Q8TF08 81 aa2.18□□□□□ -2.06
PDLIM1P4-201ENST00000504327 DEFB104AQ8WTQ1 72 aa2.18□□□□□ -2.06
PDLIM1P4-201ENST00000504327 PRO1854Q9UHT4 67 aa2.18□□□□□ -2.06
PDLIM1P4-201ENST00000504327 SPCS1Q9Y6A9 102 aa2.18□□□□□ -2.06
PDLIM1P4-201ENST00000504327 A0A087WTM6 91 aa2.17□□□□□ -2.06
PDLIM1P4-201ENST00000504327 TEX49A0A1B0GTD5 131 aa2.17□□□□□ -2.06
PDLIM1P4-201ENST00000504327 COX6CP09669 75 aa2.17□□□□□ -2.06
PDLIM1P4-201ENST00000504327 SPAG11BQ08648 103 aa2.17□□□□□ -2.06
PDLIM1P4-201ENST00000504327 LINC00304Q8N9R0 145 aa2.17□□□□□ -2.06
PDLIM1P4-201ENST00000504327 ZNF625Q96I27 306 aaPredicted RBP2.17□□□□□ -2.06
PDLIM1P4-201ENST00000504327 SRRM2Q9UQ35 2752 aaKnown RBP2.17□□□□□ -2.06
PDLIM1P4-201ENST00000504327 ELOF1P60002 83 aaKnown RBP2.16□□□□□ -2.06
PDLIM1P4-201ENST00000504327 COX6A2Q02221 97 aa2.16□□□□□ -2.06
PDLIM1P4-201ENST00000504327 WFDC2Q14508 124 aa2.16□□□□□ -2.06
PDLIM1P4-201ENST00000504327 CLPSL2Q6UWE3 100 aa2.16□□□□□ -2.06
PDLIM1P4-201ENST00000504327 COA5Q86WW8 74 aa2.16□□□□□ -2.06
PDLIM1P4-201ENST00000504327 TOMM7Q9P0U1 55 aa2.16□□□□□ -2.06
PDLIM1P4-201ENST00000504327 DMBT1Q9UGM3 2413 aaPredicted RBP2.16□□□□□ -2.06
PDLIM1P4-201ENST00000504327 CHKB-CPT1BH3BT56 60 aa2.15□□□□□ -2.07
PDLIM1P4-201ENST00000504327 DNAL4O96015 105 aa2.15□□□□□ -2.07
PDLIM1P4-201ENST00000504327 LINC00158P58513 81 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms