RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 C9orf163Q8N9P6 203 aa5.4□□□□□ -1.55
FN1-227ENST00000498719 LCE6AA0A183 80 aa5.39□□□□□ -1.55
FN1-227ENST00000498719 VPS13DQ5THJ4 4388 aa5.39□□□□□ -1.55
FN1-227ENST00000498719 ATP5EP56381 51 aaPredicted RBP5.39□□□□□ -1.55
FN1-227ENST00000498719 C14orf177Q52M58 125 aa5.39□□□□□ -1.55
FN1-227ENST00000498719 DNAH2Q9P225 4427 aa5.39□□□□□ -1.55
FN1-227ENST00000498719 FBN3Q75N90 2809 aa5.38□□□□□ -1.55
FN1-227ENST00000498719 NBDYA0A0U1RRE5 68 aa5.38□□□□□ -1.55
FN1-227ENST00000498719 MEGF8Q7Z7M0 2845 aa5.37□□□□□ -1.55
FN1-227ENST00000498719 Q6ZRN7 208 aaPredicted RBP5.37□□□□□ -1.55
FN1-227ENST00000498719 ZCCHC13Q8WW36 166 aaKnown RBP5.37□□□□□ -1.55
FN1-227ENST00000498719 SPRR1BP22528 89 aa5.36□□□□□ -1.55
FN1-227ENST00000498719 hDV103S1A0JD37 113 aa5.35□□□□□ -1.55
FN1-227ENST00000498719 TYMSOSQ8TAI1 123 aa5.35□□□□□ -1.55
FN1-227ENST00000498719 DNAH8Q96JB1 4490 aa5.35□□□□□ -1.55
FN1-227ENST00000498719 ASB16-AS1Q495Z4 193 aa5.34□□□□□ -1.55
FN1-227ENST00000498719 KRTAP13-1Q8IUC0 172 aa5.34□□□□□ -1.55
FN1-227ENST00000498719 KRTAP29-1A8MX34 341 aaPredicted RBP5.34□□□□□ -1.56
FN1-227ENST00000498719 LINC00472Q9H8W2 130 aa5.34□□□□□ -1.56
FN1-227ENST00000498719 Q1T7F1 81 aa5.33□□□□□ -1.56
FN1-227ENST00000498719 DNAH17Q9UFH2 4485 aa5.32□□□□□ -1.56
FN1-227ENST00000498719 CASC2Q6XLA1 102 aa5.32□□□□□ -1.56
FN1-227ENST00000498719 SPTSSBQ8NFR3 76 aa5.32□□□□□ -1.56
FN1-227ENST00000498719 SPACA4Q8TDM5 124 aa5.32□□□□□ -1.56
FN1-227ENST00000498719 LINC00208Q96KT6 92 aa5.32□□□□□ -1.56
FN1-227ENST00000498719 DNAH6Q9C0G6 4158 aa5.31□□□□□ -1.56
FN1-227ENST00000498719 NUPR2A6NF83 97 aa5.31□□□□□ -1.56
FN1-227ENST00000498719 ANAPC11Q9NYG5 84 aa5.3□□□□□ -1.56
FN1-227ENST00000498719 A0A087WTM6 91 aa5.29□□□□□ -1.56
FN1-227ENST00000498719 P0C880 135 aa5.28□□□□□ -1.56
FN1-227ENST00000498719 TRAV22A0A0B4J277 110 aa5.28□□□□□ -1.56
FN1-227ENST00000498719 H0Y9P7 68 aa5.28□□□□□ -1.56
FN1-227ENST00000498719 Q96NJ1 140 aa5.27□□□□□ -1.57
FN1-227ENST00000498719 C20orf166-AS1Q96NR2 134 aa5.27□□□□□ -1.57
FN1-227ENST00000498719 PSORS1C2Q9UIG4 136 aa5.27□□□□□ -1.57
FN1-227ENST00000498719 DNHD1Q96M86 4753 aa5.27□□□□□ -1.57
FN1-227ENST00000498719 MMP24-AS1A0A0U1RRL7 71 aa5.27□□□□□ -1.57
FN1-227ENST00000498719 MOBPQ13875 183 aa5.27□□□□□ -1.57
FN1-227ENST00000498719 H3BPC8 53 aa5.26□□□□□ -1.57
FN1-227ENST00000498719 RTL8CO15255 209 aa5.26□□□□□ -1.57
FN1-227ENST00000498719 SPANXA2-OT1Q8N9U9 137 aa5.26□□□□□ -1.57
FN1-227ENST00000498719 A8MU10 97 aa5.25□□□□□ -1.57
FN1-227ENST00000498719 ALMS1Q8TCU4 4167 aa5.25□□□□□ -1.57
FN1-227ENST00000498719 NDUFB1O75438 58 aa5.24□□□□□ -1.57
FN1-227ENST00000498719 CYP4F30PQ9H0H9 118 aa5.24□□□□□ -1.57
FN1-227ENST00000498719 LINC00483Q53H64 154 aa5.24□□□□□ -1.57
FN1-227ENST00000498719 DNAH11Q96DT5 4516 aa5.23□□□□□ -1.57
FN1-227ENST00000498719 Q6ZR54 194 aa5.23□□□□□ -1.57
FN1-227ENST00000498719 DNAH5Q8TE73 4624 aa5.21□□□□□ -1.57
FN1-227ENST00000498719 ZNF861PO60384 105 aa5.21□□□□□ -1.58
FN1-227ENST00000498719 PLAC8Q9NZF1 115 aa5.21□□□□□ -1.58
FN1-227ENST00000498719 Q5W150 140 aa5.2□□□□□ -1.58
FN1-227ENST00000498719 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
FN1-227ENST00000498719 MIR22HGQ0VDD5 57 aa5.19□□□□□ -1.58
FN1-227ENST00000498719 PCOTHQ58A44 107 aa5.19□□□□□ -1.58
FN1-227ENST00000498719 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
FN1-227ENST00000498719 SPINK6Q6UWN8 80 aa5.17□□□□□ -1.58
FN1-227ENST00000498719 LRP1BQ9NZR2 4599 aa5.16□□□□□ -1.58
FN1-227ENST00000498719 LY6G6CO95867 125 aa5.16□□□□□ -1.58
FN1-227ENST00000498719 HYDINQ4G0P3 5121 aa5.16□□□□□ -1.58
FN1-227ENST00000498719 PKD1P98161 4303 aa5.15□□□□□ -1.58
FN1-227ENST00000498719 IGLV7-43P04211 117 aa5.15□□□□□ -1.59
FN1-227ENST00000498719 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
FN1-227ENST00000498719 KRTAP10-2P60368 255 aa5.14□□□□□ -1.59
FN1-227ENST00000498719 MRPL34Q9BQ48 92 aaKnown RBP5.14□□□□□ -1.59
FN1-227ENST00000498719 TP53AIP1Q9HCN2 124 aa5.14□□□□□ -1.59
FN1-227ENST00000498719 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
FN1-227ENST00000498719 KRTAP25-1Q3LHN0 102 aa5.13□□□□□ -1.59
FN1-227ENST00000498719 KRTAP21-3Q3LHN1 58 aa5.13□□□□□ -1.59
FN1-227ENST00000498719 VPS13BQ7Z7G8 4022 aa5.12□□□□□ -1.59
FN1-227ENST00000498719 COA5Q86WW8 74 aa5.12□□□□□ -1.59
FN1-227ENST00000498719 FAT2Q9NYQ8 4349 aa5.12□□□□□ -1.59
FN1-227ENST00000498719 A0A1B0GU33 70 aa5.11□□□□□ -1.59
FN1-227ENST00000498719 Q5VV11 94 aa5.11□□□□□ -1.59
FN1-227ENST00000498719 PRR15LQ9BU68 103 aa5.08□□□□□ -1.6
FN1-227ENST00000498719 PKHD1P08F94 4074 aa5.08□□□□□ -1.6
FN1-227ENST00000498719 KRTAP13-2Q52LG2 175 aa5.06□□□□□ -1.6
FN1-227ENST00000498719 CHKB-CPT1BH3BT56 60 aa5.05□□□□□ -1.6
FN1-227ENST00000498719 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
FN1-227ENST00000498719 HRES1P13985 223 aa5.05□□□□□ -1.6
FN1-227ENST00000498719 KRTAP10-1P60331 282 aa5.05□□□□□ -1.6
FN1-227ENST00000498719 KRTAP13-3Q3SY46 172 aa5.05□□□□□ -1.6
FN1-227ENST00000498719 SPAG11AQ6PDA7 123 aa5.05□□□□□ -1.6
FN1-227ENST00000498719 LIMD2Q9BT23 127 aa5.05□□□□□ -1.6
FN1-227ENST00000498719 CSAG1Q6PB30 78 aa5.05□□□□□ -1.6
FN1-227ENST00000498719 SSBP3-AS1Q7Z2R9 100 aa5.04□□□□□ -1.6
FN1-227ENST00000498719 LOC101927531A0A1B0GV80 90 aa5.02□□□□□ -1.61
FN1-227ENST00000498719 Q6ZSA8 131 aa5.01□□□□□ -1.61
FN1-227ENST00000498719 KRTAP1-4P0C5Y4 121 aa4.99□□□□□ -1.61
FN1-227ENST00000498719 LINC01558Q9Y6Z2 57 aa4.97□□□□□ -1.61
FN1-227ENST00000498719 SACSQ9NZJ4 4579 aa4.95□□□□□ -1.62
FN1-227ENST00000498719 SPINK7P58062 85 aa4.94□□□□□ -1.62
FN1-227ENST00000498719 R4GN34 69 aa4.93□□□□□ -1.62
FN1-227ENST00000498719 ACYP2P14621 99 aa4.93□□□□□ -1.62
FN1-227ENST00000498719 FAT1Q14517 4588 aa4.92□□□□□ -1.62
FN1-227ENST00000498719 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
FN1-227ENST00000498719 KRTAP4-6Q9BYQ5 205 aa4.92□□□□□ -1.62
FN1-227ENST00000498719 IGKV2D-30A0A075B6S6 120 aa4.92□□□□□ -1.62
FN1-227ENST00000498719 DMAC1Q96GE9 116 aa4.92□□□□□ -1.62
FN1-227ENST00000498719 DYNC1H1Q14204 4646 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms